Maylandia zebra (zebra mbuna): 101470843 Help Entry 101470843         CDS       T02814                                  Symbol pdcd11 Name (RefSeq) protein RRP5 homolog isoform X2   KO K14792   rRNA biogenesis protein RRP5 Organism mze  Maylandia zebra (zebra mbuna) Brite KEGG Orthology (KO) [BR:mze00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:mze03009]     101470843 (pdcd11) Ribosome biogenesis [BR:mze03009]  Eukaryotic type   90S particles    Other 90S particles     101470843 (pdcd11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  S1_RRP5 S1 Spt6_S1 HAT_PRP39_C HAT_PRP39_N HAT_Syf1_CNRKL1_N OB_RRP5_4th Suf HAT_Syf1_CNRKL1_C TPR_14 TPR_19 TPR_16 ARM_TT21 RPN7 ARM_TT21_5th TPR_15 TPR_CcmH_CycH TPR_17 Ig_NUP210_15th ANAPC3 Motif Other DBs NCBI-GeneID:  101470843 NCBI-ProteinID:  XP_004539010 LinkDB All DBs Position LG6:30158348..30172747 Genome browser AA seq 1805 aa AA seqDB search MASAVEDFPRGGTAKKSTGSKTVVHRTEADNLFQSNEQAETKKRKAGAKDDSKKLKKQKA EEKKVGLTLNAPVKCVEILHVKDVKEGMLMLGCVKEVTDFEVTVSLPSGLQGFLSIKNIC DSYTKLLSEQLDSADTEEICSLPHLFYPGMVLRCVVAKLDVTKRGSLSIQLSINPKLVNK SLTPSGLKTGMVLSACVESVEDYGYIIDIGVSGTKAFLSKESLKFKHNNAQELKVGQYLT SQVEEVKNDGRVVQLSANLTTIAQTCAEPKQGWNLTTLLPGLLVKAAIKEVTKHGLILDF LSSFNGQVDFLHMEPEQASSYTKGLQVNARVLYIEPQTRLVGMSLRSHLIHLDTGIEPVP AGRERIGEVVKECKMTAMHHLSGGVLELPDKTLAFVHRNHLKESNEQTNENRVFAQPEHI CRILDFSPMEQIHFATLRRSVIGKPFYRYHDVQAGQVVEGTVSVLLSHGMVVHLSDHIKG LVPRTHLSDIVLQNPEKKYMEGMKVKCRVLSVDAENKKLYLTRKKTLVESSLPLFLSYND TRPGRVSHGYIVSVKDFGCIVRFYNGVKGLVPLSELSSEPIVRPEDIFYVGQVVKAKVLQ CDPEKGKMALSFKAVVKKENEETEKPEFDCEVGKRLDAKVLKKSLNGLEVAILPDEIHAV LPMSHLSDHMSNCPLLWESLQEGDIISKLICPSKNKQNITLTKKPTVRWSLEEGVVAKDF SEITVGLQLVGWIKNIMPYGVFVEFPYGLCGLAPKSAMTDKFIRDTTNTFQVGQTVIAKV TNLDEEKRRFLVTLKISEVISPQGDAQTRLINGLQERRAVTEMLVMKDNSELQQQLAALS VGQKLKLTVDTVNDTGATFKSDALIGATILANKHHMMGVKLTNGQKVGAVVLHVDMLSAC VHVSILSKVMGKKKSLAEGLKYTAMVQHIDKDFAVISLGDTAQLTVIQTCSHLNEIFLSE SEKLKAGMTLSAEVIEPSCQELQGLPLVSWERSMPERKRTASENQTGRKGHCFGEILQGT VRTVKPTCIQVTLEDGSSGSVHVSEVVEPAEVRLGSFPTSSVKVGSVVTARVIGGREASS HRFLPFSHPKFTYTISELTLIPSKLNESVDFKPVTAKEKLSSYTAGEEITCFVSKFNSDR KSLEVTTDPSVSGTVELLAMTTDPKDIGHPEKLYKLGQAVRARVVEASFPPHRFVLSLTG VHKLEKGSITLGIVTNIQPQTGLLVKLPFGGMGTVAVTDLADAYRPNPLAVYNKDQFLRC YLLDNENDKWQLSLRPSRLNPDKAKPAKDPEVLSVNKLKAGQIIRGYVKSVGEQGVFIRL SRSIIGRAELQQTTKYFVKNHKIVSEHLPPNALLTTKILSIDKEEEFINLSLLPEDTGKP DVLPESLGLPLRLVREEKKKQDKKSKKRPASESEEISKKKKKESKKARTDDNDSGVEVYF REEEDKEDEGKPAKVTSSASCPSRLQVTAGFSWDVGLSSLKPASAAQEEDSSDGEDQEGS TKPQKKSRHEQEQEKKEAEKALIQREAELMDPNLRPQDAAAFERLLLASPNSSLLWLQFM AHHLQATQIEQARTVAERALKTISFREEQEKLNVWVALLNLENMYGTEESLKKVFERAVQ FCEPMPVYQKLSEIYAKSNKIKEAEGLYKTMVKRFRQNKEVWFSYGTFLLQQGQSDAASN LLQRALKSLPPKESVDVIAKFAQLEFRYGDVERGRNMFDKVLSTYPKRTDLWSVFIDLMV KHGSQKEIRALFDRVIHLSVSVKKIKFFFKRYLEYEKTHGTPQSVQAVKEKAIEFVEAKG TEGTK NT seq 5418 nt NT seq  +upstreamnt  +downstreamnt atggcatcggcggtggaggacttccctcgaggagggacagcaaagaagtctactgggagt aaaacagtggttcatcgaacagaagcggacaatctgtttcagtctaatgagcaagctgaa accaagaaaagaaaggcaggagccaaagatgacagcaaaaagctcaagaagcaaaaggca gaggaaaagaaagttggcctgacacttaacgctccagtcaaatgtgtggaaattctgcat gttaaggatgtgaaggagggcatgctgatgctaggctgtgtgaaagaggtgacagacttt gaggtgaccgtcagcctgcctagtggcctgcaaggctttctcagcatcaagaacatctgc gattcatacaccaagctgctgagtgagcagctggactcagctgacacagaggaaatctgc tctttgccacaccttttctaccccggcatggtgctcaggtgtgtggttgccaagttggat gtaacgaagagaggctcgcttagcatccagctgtcaatcaatccaaaactggtcaacaaa agtctgaccccgagtggactgaaaactggcatggtcttgagtgcgtgtgtggagagcgtg gaggattacggctacatcattgacattggtgtcagtggaaccaaggcctttctgtctaag gaatccctgaaattcaaacacaacaatgctcaagagctgaaagtgggtcagtatttgact tcccaagtagaagaggtgaagaatgatggtcgcgtggtccagctttctgctaacctgact acgattgctcagacttgtgctgaacccaagcagggctggaacctcacaacacttcttcct ggccttctggtcaaagctgccatcaaggaggtgaccaaacacggcctgatcctggacttc ctgtcctcgtttaatggccaggtggattttctccacatggagccagaacaggcttccagc tacactaagggacttcaggtgaatgcgcgcgtgctgtacatcgagccacagactcgtctg gtgggaatgagcctgcgcagccaccttattcatcttgatactgggattgagcccgttcct gcaggtagggaacggattggagaggtggtgaaggagtgcaagatgaccgctatgcaccac ctgtctggaggagtgttggaacttccggacaaaacgttggcctttgtacatcggaaccac ctgaaggagtctaatgagcaaactaatgaaaacagagtgtttgcccagcctgagcacatc tgcaggatcctggacttcagccccatggagcaaattcattttgctactttacgcaggagt gtgattgggaagcctttttacagataccatgatgttcaggccggtcaggttgtggagggg acagtgtcagtcctgctgagtcatgggatggtggtgcatctgtctgaccacattaaaggt ttggtgcctcgaacccatctgtctgacattgtcctgcagaatccggagaaaaagtacatg gagggcatgaaggtcaaatgtcgggtgctgtcagtagatgcagagaataagaagctgtac ctgaccagaaaaaagactctggttgaaagctccttgccgttgttcctgagctataatgac actcgtcctggtcgtgtgtcccacggctatatcgtgagcgtaaaagactttggctgcatt gtccgtttttacaatggggttaagggtctggtgccgctcagtgagctgagctctgagccc atcgttcgtcccgaggacatcttctacgttgggcaggtggtaaaggctaaagttcttcag tgtgatcctgaaaagggaaagatggcgctttcatttaaggcagtggtcaaaaaagaaaat gaggagactgaaaaacctgagtttgactgtgaagtggggaagaggctggatgcaaaggtg ctgaaaaagtcactcaacggtttggaagtggccatcctcccggatgagatccatgctgta ctgcctatgagccacctgtctgatcacatgtccaactgccctctgctgtgggagagcctg caggaaggagatatcatctcaaaactcatctgtccaagcaagaacaagcagaatattact ctcaccaagaaaccaacagtgagatggtcactggaggaaggagtggttgccaaagatttc tctgagatcactgttggacttcagctggttggctggatcaaaaatatcatgccctatggt gtctttgtggagtttccatacggcctttgtggacttgcacccaaatcagccatgactgac aagttcatccgagatacgacgaacaccttccaggttggccagacggtcattgctaaagtg acaaacctcgatgaggagaagcggcgattcctggtcacactgaagatttcagaggtcata tcaccacagggggatgcccagacaagactcattaatggtcttcaggagagaagagcagtc actgaaatgttggttatgaaagataacagtgaacttcagcagcagctggctgctctgtct gttggacagaaactgaagctgactgtggatactgtgaatgacaccggtgccacgtttaag tctgatgccttgattggtgctaccattctggccaataagcaccacatgatgggtgttaaa ctgaccaacggacagaaagtcggtgcagttgtccttcatgttgacatgctttctgcttgt gtccatgtctctatcctttccaaggtgatggggaagaagaaatctctggctgaagggttg aaatacacagcaatggtgcagcacatagacaaagactttgccgtcatctcattgggtgac acggcacagctgactgtgatccagacttgcagccacctgaatgagatattcctgtctgag tcagagaagctgaaggcgggcatgactttgtcagctgaagttattgaacccagctgtcaa gagctgcaagggctccctttggtgtcgtgggagcgcagtatgccagagcgaaagcgcaca gcttcagaaaaccagactggccgcaagggccactgctttggtgaaatcctgcagggcacg gtgcggacagtaaaacctacctgcatccaggttaccttagaggatggaagctcaggtagc gtgcatgtgtctgaagtggtggagcctgcagaagtgcgcctgggatctttccccacgtca tcagtgaaagtgggcagcgtggtcaccgccagggttatcggaggacgagaggcttccagt cacagattcttgccattctcccatccaaagttcacatacaccatttccgagcttacgctg atacccagcaaactgaatgagagtgtcgatttcaaaccagttacagcaaaagaaaaactg agcagctatacagctggggaggaaattacatgctttgtatcaaagtttaactcagacaga aagtctttggaagtcacaactgatcccagtgtttctggaacggttgaactgctggcaatg accactgatcctaaagatatcggccaccccgagaaactgtacaagctgggccaagcagtc cgtgccagagtggtagaagcgagcttccctcctcatcgctttgtgctgtcactcacaggt gtccataaactggagaaaggcagcattactttggggatagtaacaaatattcagccacaa actggcctgctggtcaaacttccctttgggggcatggggactgttgctgtcacagacctt gctgatgcctacaggccaaacccactggctgtttacaacaaggatcagtttctcaggtgt taccttctcgataatgaaaatgacaagtggcagttgtctctgcgaccatcaaggctgaac ccagacaaggccaagccagcaaaagacccagaagtgttgtctgtaaacaaactgaaggca ggtcagatcatcagaggctatgtgaagtctgttggagagcagggagtcttcatcaggttg tcaagaagcatcattggaagagctgagctccagcaaaccaccaaatactttgttaaaaat cacaaaatcgtctctgagcacctgcctcccaacgccctgctcaccaccaaaattctcagt attgacaaggaggaggagtttatcaacctctcgcttctccctgaggacaccgggaagcca gacgtccttccagaatcgctcggtctgccgctgcgtctcgtcagagaggagaagaagaaa caagataagaagagcaagaaacgcccagcatctgagagcgaagagatctcaaagaaaaag aagaaggaatcaaagaaggcaagaactgatgataatgatagtggagtagaggtgtacttc agagaagaggaggataaggaagatgaaggaaaacctgcaaaagttacatccagtgcatcg tgtccatctagactgcaggtgacagcaggtttctcctgggatgtgggtcttagctccctg aagcctgcctctgcagcgcaggaggaggactcgagtgatggagaagaccaagagggaagc actaagccccagaagaagtctcgtcatgagcaagagcaggagaaaaaggaagcagagaag gctttgatacagagagaggctgagctgatggatccaaacctgcggccccaggatgcagct gccttcgagcgtctgctcctagcatcacccaacagctcgctgctgtggctccagttcatg gctcaccatctgcaggctacacagatcgagcaggcccgcactgtcgctgaaagagccctg aaaacgatctccttcagggaggagcaggagaagctgaatgtgtgggtggccctgctgaac ctggagaacatgtatggcacagaggagagtctcaagaaggtgtttgagcgggcagtgcag ttctgtgagcccatgcctgtataccagaagctgtctgagatctacgccaagtccaacaaa atcaaggaggcagagggcctgtataagacgatggtgaagcgcttccgtcagaataaggaa gtatggtttagctatgggaccttcctgcttcagcagggtcagagtgatgctgccagtaat ctcctgcagagggcgttgaagagtctccctccaaaagaaagtgtggatgtgatcgccaag ttcgctcagctggagtttcgttacggtgatgtagagagaggtcgcaacatgtttgacaaa gtcctgagcacatacccaaaacgtaccgacctgtggtctgttttcatcgacctcatggtc aaacatggatcgcagaaggaaatcagagcgctctttgatcgagtgatccacctgagtgtt tctgtgaagaagatcaagttcttcttcaagcgttacctggaatatgagaagacacatggc acccctcagagcgtccaagcagtaaaagaaaaggccattgagtttgtggaggctaaaggc acagagggtaccaagtaa

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