Maylandia zebra (zebra mbuna): 101471082
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Entry
101471082 CDS
T02814
Symbol
smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101471082 (smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mze03021
]
101471082 (smarcd3)
03036 Chromosome and associated proteins [BR:
mze03036
]
101471082 (smarcd3)
Transcription machinery [BR:
mze03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101471082 (smarcd3)
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101471082 (smarcd3)
PBAF complex
101471082 (smarcd3)
GBAF(ncBAF) complex
101471082 (smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
TFIIA
Ribosomal_uS5m_N
Motif
Other DBs
NCBI-GeneID:
101471082
NCBI-ProteinID:
XP_004552033
LinkDB
All DBs
Position
LG9:10334820..10395917
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AA seq
517 aa
AA seq
DB search
MAMEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PSPVMEPSRKRPAPSQQVQQQQQQQQQQQQQQAVQNRARKKPVGFPGANEMPARQMDMRE
PQSDPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEAL
KRPMKQQKRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFFK
SLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLEYQPPQFKLD
PRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIP
QRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKSQMSSFLLSTANQQEIA
SLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDFKLMTDVVGNPEEERR
AAFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggctatggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcccggcatgccgtctggagcgagaatgccccaccaggga
gctcccatgggcccccccggcccgccgtacggagggagcccggcggtgcggcccggcctg
ccctccccagtgatggagcccagccgtaagaggcctgccccctcccagcaggtccagcag
cagcagcagcagcaacagcagcagcagcagcagcaggccgtccagaaccgtgccagaaag
aagccagtcggattccccggagccaatgagatgccggcgaggcagatggacatgagagag
ccccaatcagatcccacgctcggatcaaatgctaagagaaggaaaatggcagacaagatt
cttccgcaaaggatccgtgagctggtccctgagtctcaggcctacatggacctgcttgca
tttgagcgcaaactggaccagaccatcatgcgcaaacgcgtggacatccaggaggccctg
aagaggccaatgaagcagcagaagcgtaaactgaggctttacatttccaacaccttcaac
cctgccagacctgacgcagatgactctgatggcagcattgcgtcatgggaactgcgagta
gaggggaagttgctggatgatccggggaagcagaagaagaaattctcttcgtttttcaag
agcctggtgatcgagctggataaagacctgtacggtcctgacaaccacctggtcgagtgg
caccgcacgcccaccacccaggagacggacggcttccaggtgaagcggccaggagacgtg
agcgtgcgctgcactctgctgctgatgctggaataccagcctccccagtttaagctggac
cctcgcctggctcgcctgctcggtattcacactcagactcgctcctgcatcatccaggcc
ctctggcagtacgtgaagaccaacaagctgcaggactcgcatgacaaggagtacatcaac
tgtgacaagtatttccaacagatttttgactgccctcggctgaagttctctgagatccct
cagcgcctcaccaacctcctcctgccccctgaccccatcgtcatcaaccacgttatcagc
gtggatcccaacgaccagaagaagacggcctgctacgacattgacgtggaggtggacgac
cccctgaagagccagatgagcagcttcctcctctccaccgccaaccagcaggaaattgcc
tcactcgacaacaagatccatgagaccatcgagtccatcaatcagctgaagatccagagg
gatttcatgctgagtttctccagagatcccaagggctacatccaggactggctcaaatcc
cagagccgagactttaagttaatgacagacgtggtggggaaccctgaagaggagcggagg
gcggcgttctaccacgaaccctggtcccaagaggccgtcagccgctatttctactgcaag
atccagcagaggagacaggagctggaacaggccttagcggtccgcaacacctaa
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integrated database retrieval system
