Maylandia zebra (zebra mbuna): 101471172
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Entry
101471172 CDS
T02814
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101471172 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mze03021
]
101471172 (smarca5)
03036 Chromosome and associated proteins [BR:
mze03036
]
101471172 (smarca5)
Transcription machinery [BR:
mze03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
101471172 (smarca5)
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
101471172 (smarca5)
RSF complex
101471172 (smarca5)
WICH complex
101471172 (smarca5)
B-WICH complex
101471172 (smarca5)
NORC complex
101471172 (smarca5)
BRF complex
101471172 (smarca5)
NuRF complex (fruit fly)
101471172 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
AAA_14
Motif
Other DBs
NCBI-GeneID:
101471172
NCBI-ProteinID:
XP_004549395
UniProt:
A0A3P9BRA8
LinkDB
All DBs
Position
LG6:complement(19858962..19869069)
Genome browser
AA seq
1036 aa
AA seq
DB search
MSESANCVEQREEQAEVEDAGGAEEKSDSSDAGKESSSDAGADGQDASSSSSSSKTKDST
PGYEEKVQTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLS
AGDNRHRRTEQEEDEELLNESTKTTNVCTRFDESPSYVKTGKMRDYQVRGLNWLISLYEN
GINGILADEMGLGKTLQTIALLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRA
VCLIGDRDERTALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEK
SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGD
QKLVERLHTVLRPFLLRRIKADVEKTLLPKKEIKIYVGLSKMQREWYTKILMKDIDILNS
AGKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDIHLAVNSGKMVVLDKLLPKLKE
QGSRVLIFSQMTRMLDILEDYCMWRNYGYCRLDGQTPHEERQISINVFNEPNSSKFIFML
STRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRFITENTVEERI
VERAEMKLRLDSIVIQQGRLVDPSANKLGKDEMLSIIRHGATHVFASKESEITDDDIDAI
LERGERKTMEMKERMSSLGESSLRNFTMDTENTSVYTFEGEDYREKKKVITNWIEPPKRE
RKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIG
YKVPRNPDIPNSAQVQKEEQAKIDEAEALTEEELEEKETLLQQGFTIWNKRDFNQFIKAN
EKWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISI
KKALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCI
RNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPKTGSAQKRK
SEGTPDGRGRRKKLKL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaagcgcaaactgcgtggaacagcgggaagagcaggctgaagttgaagacgcc
ggaggagcggaggagaagtctgactcttcagatgctggaaaagagtcctcttcagatgca
ggtgctgatggacaagatgcctcctcctcctcatcttcctccaaaactaaagactctact
ccaggttatgaggagaaagtgcaaacagaccggaccaacagatttgagtatctgctgaag
caaacagagctgtttgctcatttcatccaaccagctgcacagaagacccccacctcaccg
ctcaagatgaaaccgggacgtcctcgtatcaagaaggacgagaaacagaatttgctttca
gctggagacaaccgccaccgtcgcacggaacaagaagaggatgaagagcttcttaatgag
agcacaaagaccacaaatgtgtgcactcgctttgacgagtctccctcctatgtgaaaaca
gggaagatgagggactatcaggtccgtggtctgaactggctcatttctttgtacgagaat
ggaatcaatggtatcctcgccgatgaaatgggattgggtaagactctccaaactattgca
ctgctgggttatatgaagcactacagaaacatccctggtcctcacatggtgctggttccc
aagtccaccctctacaactggatgaatgagttcaagagatgggtgccttcccttcgtgct
gtctgcctgatcggagacagagatgagcggactgccctgatccgagatgtgctgctgcct
ggagagtgggatgtgtgcgtgacatcctacgagatgctcatcattgaaaaggcggtgttc
aaaaaattcaactggagatacctggtcattgatgaggctcacaggatcaagaacgagaag
tcaaagttatcagaaattgtgcgtgaatttaagaccaccaatcgtttgctgttgactgga
acacccctgcaaaacaacctccatgagctgtgggctctcctgaacttcctgctgcctgat
gtcttcaactcatcagaagactttgattcctggtttgacacaaataactgcctgggtgat
caaaagttggttgaacgtcttcacactgtgctgcgtcctttcttgcttcgtcgtatcaaa
gcagacgtggagaaaactctgctccccaagaaggagatcaagatttatgttggcctgagt
aagatgcagcgggagtggtacacaaagattctgatgaaggacatcgacattctgaactcg
gcgggtaaaatggacaagatgcgtctgctgaacgttctcatgcagctgagaaaatgctgc
aaccatccttacctgtttgatggggctgagcccggcccaccgtacacaacagacatccac
ctggcggtgaacagcggcaagatggtggtgctagacaagctgctgcccaagctaaaagag
cagggttcacgtgtgctcatcttcagtcagatgaccaggatgctggacatcttggaggac
tactgcatgtggaggaactacggttactgtcgcctggatgggcaaactccacacgaggag
agacagatctccatcaatgttttcaatgagcccaacagctcaaagttcatctttatgttg
agcaccagggctggaggtctgggtattaacctggcaacagcagatgtagtcatcctctac
gactcagactggaaccctcaagtcgatcttcaggccatggaccgagctcacaggattggt
cagcagaagcaggtccgagttttccgtttcatcactgaaaacacagtggaggagaggatt
gtggagagggccgagatgaaactgcgcctggactcgatcgtcatccagcaaggcagactt
gtggatccgagtgcaaacaaactgggtaaggatgagatgctctccatcatccgccacggt
gccacacatgtgtttgcttccaaagagagcgagatcacagatgatgacatcgatgccatc
ctggagagaggtgaaaggaagactatggagatgaaggagagaatgtcatcactgggtgag
agctctttgagaaacttcaccatggacacggagaacaccagcgtgtacaccttcgaagga
gaggactacagagagaagaagaaggtcattacaaactggatcgagccgcccaagagagaa
aggaaagccaattacgcggtggatgcctacttcagagaagctctgcgagtcagtgagccc
aaagcaccaaaggctcctcgtccgcctaagcagccaaatgtgcaggacttccagttcttc
cctccacgtctttttgagcttctagaaaaggaaattctcttctacagaaagaccattgga
tataaggttcctcgcaatccagacataccaaactctgctcaggtccagaaggaggagcag
gctaagatcgatgaggccgaggccctcacagaggaggaactggaagagaaggaaaccctt
ctgcaacagggatttactatttggaacaaacgtgacttcaaccaattcatcaaagcaaac
gagaagtgggggagagatgatattgagaacattgccagagaggttgaggggaaaactccg
gaggaagtcatggaatattctgctgtattctgggagcgctgcaatgagttgcaggatatt
gaaaagatcatggctcagatagaaagaggagaggccaggattcagaggaggatcagcatc
aagaaagcactggactcaaagattggccgctacaaggctcctttccatcagctccgtatc
tcctacgggactaacaaaggcaagaactacacagaggaggaagaccgcttcctcatctgt
atgcttcacaagcttggctttgataaggagagcgtgtacgacgagctccgccagtgcatc
cgcaactcaccacagttccgcttcgactggttcctcaaatctaggactgcaatggagctc
cagaggcgatgcaacaccctgatcaccctgatagagagagagaacatggagctggaggag
agggagaaggcggaaaagaagaaacggggcccaaagaccggctcggcgcagaaacgaaag
tcagagggaactccagacggtcgaggacgaaggaaaaagctcaagttgtga
DBGET
integrated database retrieval system
