Maylandia zebra (zebra mbuna): 101471418
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Entry
101471418 CDS
T02814
Symbol
cnot4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101471418 (cnot4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mze03000
]
101471418 (cnot4)
03019 Messenger RNA biogenesis [BR:
mze03019
]
101471418 (cnot4)
04121 Ubiquitin system [BR:
mze04121
]
101471418 (cnot4)
Enzymes [BR:
mze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101471418 (cnot4)
Transcription factors [BR:
mze03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
101471418 (cnot4)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101471418 (cnot4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101471418 (cnot4)
Ubiquitin system [BR:
mze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101471418 (cnot4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
CLEC16A_C
Med7
DZR_2
RDD1
Torus
zf-CCCH_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
101471418
NCBI-ProteinID:
XP_004563790
UniProt:
A0A3P9BIC7
LinkDB
All DBs
Position
LG7:complement(16718098..16728510)
Genome browser
AA seq
797 aa
AA seq
DB search
MSHSPEMKDDPMECPLCMEPLEIDDVNFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEEIQRIKNEKKQKQNEKKQKVTENRKHLASVRVVQRNLVFVVGLSQRL
ADPEVLKRPEYFGRFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKSMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQDLYKINPSFLQPPACGTEKSKSKSNSTQRTNSSNGKDGWPTLSGHNKLSNGLSEDRKS
PPLLDYLDQEAITSDGLETELGPGQRTALSPFSSNCDSNSPSDKPPESIGMVNGETLQQI
PTSDSPSPPPGLTKPSLVVPISMSDITARSPFEGAAAESQSLFSDNSNFRHPNPLPAGLP
PFPSSPRGSSDWPMTPEPQSLFTSDTIPVSSSTDWQAAFGFGSSSKQQDDDLGFDPFDVT
RKALADLIEKELSVQDQSPSSPGPLTQGSNHGPSLPPSNPNPSASHHFPSGLPRVPQHHR
TIYSSFSFPSTHNSQASQQQPAARHPWLGVPTRNNLTHLNHSASAASHSNFLDLNLPPQH
NTGLGGIPISENSSSIDGLNVKEWQDGLRALLPNININFGGLPNSSSSSSSSSSNSVNHI
GGPAGPAGMSHSLSWDGTGSWMDPAIITGIPASAGNSLDCLQDDNPPHWLKSLQALTEMD
GPASSAMPTPQPLHSSLLDAHIPLHHRAAAGWAPYLPPPTANPASQFHSPPPGFQTAFRP
PGQPSTELLQSAAVDRH
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacagccctgaaatgaaggacgaccccatggagtgcccactgtgcatggagccg
ctggagattgatgacgtcaacttcttcccctgcacctgtggctaccagatctgccgcttc
tgttggcaccgcatccgtacagatgagaacggcctctgccccgcatgcagaaagccttat
ccagaggaccctgctgtgtacaagcctctgtcacaggaggagatccaaaggataaagaat
gaaaagaagcagaaacagaatgagaagaagcaaaaggtgacagaaaaccgcaagcatctg
gccagtgtcagagtggtccagagaaatctggtgtttgtggtggggctctcgcagcgactc
gctgacccagaggtcctaaaacggccggagtattttgggaggtttgggaaaatccataaa
gtggtcatcaacaatagcacatcttacgcaggttcacaggggcctagtgccagcgcttat
gttacttacatccgctctgaagatgctctaagagcaatacagtgtgtgaacaatgtggtt
gttgatggcagaacactcaaggcttctttaggcacaacaaaatactgcagttacttcctc
aaaagtatgcagtgtcccaaacctgattgtatgtacctacatgagttgggggatgaagca
gctagctttactaaagaggagatgcaggcaggaaaacatcaagagtatgagcaaaaactc
ctccaagacctctataaaattaaccctagctttctacaacctccagcttgtggaacagaa
aagtcaaagagtaaatccaactccacacagagaaccaacagtagcaatggtaaagatggg
tggccgacgctgtcagggcataacaaactgtccaacgggctttcagaagaccgcaagtcc
cctccactgctagactatctagaccaagaagctattacttcagatgggctagaaacagag
ctaggtccaggccagcgtactgccttgtcccccttttcctctaactgtgacagtaacagt
cccagtgacaaacctccagagtctatcggcatggtaaatggcgagactttacaacagata
cccacaagtgactcgccctcccctcccccgggtttaactaagcccagcctggtagtgccc
atcagcatgtcagacatcacagcccgttcgccctttgagggtgctgcagctgagtcccag
tcactcttttcagacaacagtaacttcagacatccaaaccccctccctgctggtctgcca
cccttccccagctcccctcgcggcagttccgactggcctatgacccctgaaccacagagc
ctcttcacatcagacacaataccagtgtcgtcctccacagactggcaggcggcctttggc
tttggctcatccagcaaacagcaggatgacgacctgggctttgatcctttcgatgtgact
cgcaaggctttggccgacctgatagagaaggagttgtcagtacaggatcagagcccttca
tccccagggcccctcacccaggggagcaaccatggacccagcctgccaccctccaaccct
aaccccagcgcttcccatcacttccccagtggcctcccacgtgtcccacagcaccacaga
accatctacagctccttcagtttccccagcactcacaacagccaggccagtcagcagcag
ccagctgccagacacccctggttgggcgtgcccacacggaataacctcacacacttgaac
cattcagccagtgctgcctcacacagtaattttctggacctgaatctgccgcctcagcac
aacacagggctgggagggatccccatctcagaaaacagcagctctatagacggcttaaat
gtgaaagagtggcaggatggtctcagggctcttctgcccaacattaatatcaactttggg
ggcctcccaaattcctcgtcctcttcctcctcctcatcctccaacagtgttaaccacatt
ggtgggccagctggacctgcaggcatgtcgcacagcctgagctgggacggcacaggcagt
tggatggaccccgctattattacaggcatcccagcctcagccggcaacagtttagactgc
ctccaggacgataacccaccacactggcttaaatccctgcaggcgctcacagagatggac
ggccctgccagctcagcgatgcccactccccagcccctccacagcagcctcctcgatgcc
cacatccctcttcaccacagagccgccgccggctgggctccctaccttccccctcccaca
gccaatcccgccagtcagttccactcccctcccccaggcttccagaccgccttcagaccc
ccaggacagccctccacagagctgctacagagtgctgctgtggaccgccactga
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