Maylandia zebra (zebra mbuna): 101471598
Help
Entry
101471598 CDS
T02814
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04120
Ubiquitin mediated proteolysis
mze04137
Mitophagy - animal
mze04144
Endocytosis
mze04340
Hedgehog signaling pathway
mze04350
TGF-beta signaling pathway
mze04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101471598 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
101471598 (smurf1)
04350 TGF-beta signaling pathway
101471598 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101471598 (smurf1)
04137 Mitophagy - animal
101471598 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
101471598 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mze04131
]
101471598 (smurf1)
04121 Ubiquitin system [BR:
mze04121
]
101471598 (smurf1)
03029 Mitochondrial biogenesis [BR:
mze03029
]
101471598 (smurf1)
Enzymes [BR:
mze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101471598 (smurf1)
Membrane trafficking [BR:
mze04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
101471598 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
101471598 (smurf1)
Ubiquitin system [BR:
mze04121
]
Ubiquitin ligases (E3)
HECT type E3
101471598 (smurf1)
Mitochondrial biogenesis [BR:
mze03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101471598 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
101471598
NCBI-ProteinID:
XP_004560797
LinkDB
All DBs
Position
LG4:8978608..8994420
Genome browser
AA seq
733 aa
AA seq
DB search
MSNPGSRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVFEGCFSEEPLPYSDSTGA
AGGGNCRLDSPSQESRLQTQRIRGQDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHNIISQQSQVKESSQAPQMDVGGEEGGGGGVSGGGGGGGDGDVAARYERDLVHKLKL
LRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVA
REWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHGH
YINGSFTLPFYKQLLGKPIQLNDLETTDPELHKSLVWILENDITSVLDHTFCVEHNAFGK
FSQHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPFD
HKELELIIGGLGKIDLADWKTNTRLKHCTSESNVVRWFWQAVEAFSEERRGRLLQFVTGS
TRVPLQGFKALQGSTGSAGPRLFTIHLIDANTENLPKAHTCFNRIDIPPYESYEKLYEKL
LTAVEETCGFAVE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggagtcggaggaacgggtccagcatcaaaatccgactgacagtatta
tgtgccaagaacctcgcaaagaaagacttctttcgtctgccagatccttttgccaaagtc
gtggtggacggatcaggtcaatgccactctacagatacagtaaagagcacactggacccc
aaatggaatcagcactatgacctctacattggtaaaacagactccatcaccatcagtata
tggaaccacaagaagatccataaacgacagggggcaggttttctgggctgcatacgactg
ctttctaatgccatcagcaggctaaaagacacaggataccagcgtctagatctatgtaag
ctgaacccctctgacagtgatgcagtgcgggggcagattgtagtgagcctgcaaacacga
gaccgcattggcagcggaggccctgttgtggactgtagaggactgttagaaaatgatggg
cctgtgtttgaggggtgtttcagtgaagaaccgctgccctactccgactccaccggtgcc
gcgggaggcgggaactgtcggctcgactctcccagtcaggagagccgtcttcagacccag
cgaatcagagggcaggactccagaggtcatggccacacccctcagaacagaccgcatgga
caccaaccgcctgacctgccagagggatacgagcagcgaacaacagtgcagggccaggtg
tacttcctccacacacagacaggcgtcagcacctggcatgacccccggataccacgggat
ttggccagcgtgagctgtgaggaactcgggcctttacctgtaggctgggaggtccgaagc
accgtgtctggccggatctactttgtggaccacaacaaccgaaccacacagttcacagac
ccgcgcctacacaacattatcagtcagcaatcacaagtgaaggaatcttcccaggccccc
cagatggatgtggggggtgaggaggggggcggtggaggagtaagtggcggcggcggagga
ggaggggatggagatgtggcagcgcgatacgaaagagatttggtgcacaaattaaagctg
ctccgccacgagctgtcgctgcagcagcctcaagcgggacactgtcgtatagaggtgtcc
cgagaggagatctttgaggagtcataccggcagataatgaagatgaggcccaaagacttg
aagaaacggctaatggtgaagttcaggggagaggaaggactcgattatggtggagtggcc
agggagtggttgtacctgctgtgtcacgagatgttaaacccctattacggcctgttccag
tactccacagacaatatctacacactacagatcaacccagactcctccatcaatcctgac
cacctgtcatatttccactttgtgggtcgtgtgatgggcctggcagtttttcacggtcac
tacatcaacgggagcttcacgttgcccttttacaaacagctgctgggcaaacccatccaa
ctcaacgacctggagaccactgaccccgagttgcacaagagcctcgtctggatattggag
aatgacatcacttcagtacttgatcacacgttctgtgtagagcacaatgcctttgggaag
ttctcacaacatgaactcaagcctaatggtcgtaatgtccccgtcactgaggagaacaag
aaagaatatgtaagactttatgtgaactggaggtttatgcgtggaattgaagcccagttt
ctggctctgcagaaggggttcagtgagctcatcccacagcacctcctcaaacccttcgac
cataaagaacttgagttgatcattggtggactaggaaaaatagaccttgcagactggaag
actaacacccgtctgaaacactgcacaagtgaaagcaatgtggtgcggtggttctggcaa
gcagtggaggctttcagtgaggagaggagaggacgcctcctgcagtttgtcacaggctcc
accagggtccccctacagggattcaaagcgctgcagggctctacaggttctgcaggacca
agactcttcaccatccatttgatagatgctaacacagaaaacttgcccaaggctcacacg
tgtttcaacaggatagacatccctccctatgagtcttacgagaagctttacgagaaactg
ctgactgctgtggaggagacctgcggctttgctgtggagtga
DBGET
integrated database retrieval system
