Maylandia zebra (zebra mbuna): 101471655
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Entry
101471655 CDS
T02814
Name
(RefSeq) polyadenylate-binding protein 1
KO
K13126
polyadenylate-binding protein
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03015
mRNA surveillance pathway
mze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101471655
09123 Folding, sorting and degradation
03018 RNA degradation
101471655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101471655
03041 Spliceosome [BR:
mze03041
]
101471655
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101471655
mRNA cycle factors
Stress granule specific factors
101471655
Spliceosome [BR:
mze03041
]
Complex C
Other components
Complex C specific factors
101471655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RBD_DEAH11
RRM_10
RRM_occluded
RBD_RDR6
RRM_7
RRM_3
HTH_58
Motif
Other DBs
NCBI-GeneID:
101471655
NCBI-ProteinID:
XP_004549214
UniProt:
A0A3P9DNM3
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All DBs
Position
LG22:complement(15079390..15085926)
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AA seq
634 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGQPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDENGKSRGFGFVSFER
HEDAQKAVDEMNGKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKN
LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQAAPPSGYFMAAIPQAQNRA
AYYPAAGQMAQLRPSPRWTTQNVRPQHFQNMSGGIRPSGPRPQTFSTVRPSSQVPRMMTT
QRVATQTMGPRPATAAAAAATPVRGVPQYKYAAGVRNTQQHMNTQPQVNMQQPAVHVQGQ
EPLTASMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSELLHMLESPES
LRSKVDEAVAVLQAHQAKEAAQKTVTNSAGVPSV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagtgctcccagttaccccatggcctccctgtacgtcggagatctgcatcaa
gatgtgaccgaggccatgctgtacgagaaattcagcccagccggagcaatcctctctatc
cgggtctgtagggacatgatcacccggcgttccttgggatacgcctatgtaaacttccag
caaccggcggacgctgagcgtgcactggacaccatgaactttgacgtgataaaggggcag
cctgtacgcatcatgtggtcgcagcgtgatccatcactgagaaaaagcggcgtgggaaac
atcttcatcaagaatcttgacaagtccattgacaacaaggctctttatgacaccttctcc
gcttttggcaacatcctgtcctgcaaggtggtttgtgacgagaatggctctaaaggctac
gggtttgtgcattttgagactcaggaggcggctgaacgagccattgagaaaatgaatggc
atgctgctcaatgatcggaaagtgtttgtgggccgcttcaaatctcgcaaagagcgcgag
gctgagttgggtgcccgagccaaggagtttacaaatgtctacattaaaaactttggcgat
gagatggacgatgagaagctgagggagctcttcagtaaatatggtaatgccatgagtatc
cgggtcatgacggacgaaaatggaaagtctcgagggtttgggttcgttagctttgaaaga
cacgaggatgcccaaaaggcggtggatgagatgaacgggaaggagatgaacggcaagctt
atgtatgtcggccgcgcccagaagaaggtggagcgacagactgagctgaagcgcaaattt
gagcagatgaagcaagaccgcatgactcgctaccagggtgttaatttgtatgtgaagaac
cttgacgatggaatagacgacgaacgtctgaggaaggagttttcgccattcggcaccata
accagtgccaaggtgatgatggaaggagggcgcagtaaaggctttggctttgtctgcttc
tcgtccccagaggaggccaccaaagctgtgacagaaatgaacggacgtatcgtagccacc
aagccgctgtacgtggccctggcccagaggaaagaggagcgtcaagcccacctgaccaac
cagtacatgcagcgcatggccagtgtgcgcgcagtgccaaatccagtcattaacccgtac
caggccgccccgccgtccggctacttcatggcagccatcccccaggcccagaaccgtgcc
gcttactacccagctgctggccagatggcccagctccgcccgagcccacgctggaccacc
caaaatgttcgaccacagcacttccagaacatgtcgggtggaatacgtccctcaggccct
cgccctcaaaccttcagcacagtgcggccttcctcccaggtgccccgcatgatgaccacc
cagcgagtcgccactcagaccatgggcccccgaccagccactgcagctgccgcagcagct
acccccgtgcgtggagtacctcagtacaagtatgcagcaggagttcgcaatacccaacag
cacatgaacactcagccacaagttaacatgcagcagcctgcagtccacgtccagggacag
gagcctctgactgcctccatgctggctgctgctcctcctcaggagcagaagcagatgctg
ggtgagcgtctgtttccactgatccagaacatgcaccccagcctggcaggcaagatcaca
ggcatgctgctggagatcgacaactcagagctgctccacatgctggagtccccagagtct
ctccgctcaaaggtggatgaggctgtggctgtactgcaggctcatcaggccaaggaagcc
gcccagaagacagtgaccaattcagctggtgtcccaagtgtttag
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