Maylandia zebra (zebra mbuna): 101471705
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Entry
101471705 CDS
T02814
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X2
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101471705 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mze03021
]
101471705 (taf5)
03036 Chromosome and associated proteins [BR:
mze03036
]
101471705 (taf5)
Transcription machinery [BR:
mze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101471705 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
101471705 (taf5)
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101471705 (taf5)
STAGA complex
101471705 (taf5)
TFTC complex
101471705 (taf5)
SAGA complex
101471705 (taf5)
SLIK complex
101471705 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
WD_LRWD1
WD40_like
Beta-prop_WDR35_TULP_N
VPS8_N
PROPPIN
LisH_TPL
Beta-prop_WDR11_2nd
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
101471705
NCBI-ProteinID:
XP_004539013
LinkDB
All DBs
Position
LG6:30148380..30155780
Genome browser
AA seq
749 aa
AA seq
DB search
MAAVQGGMSDADIETDIKTEPSTDGFGNNNANDGRVLSASPGSGSSTGSNKQTAAVTPED
QQTLLAVLQFLKKNKLIESVEILRREAGLPENSLDPKATESAGAGSGGAAGIVDLEGGDV
SSLLSRVTGSSSAGAQAPTKVAEDQPDVRVVLSAYSQQGDPTLYEVYYSDLKKFIETVLD
CHRAELSQVFYPLFVHMYLELVYNNHESEAKAFFEKFSGDQECYYEEDLRVLSGLTKKEH
MRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKS
QIDAMSGSLAGEAKREANKTKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDSM
GSKSKKQDPNAPSQNRIPLPELKDSDKLDKIMYMKEATKRIRLGSDNLPSVCFYTFLNAY
QGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDE
KTASESKIMYGHSGPVYGISFSPDRNYLLSSSEDGTVRLWSLLTFTCLVAYKGHNYPVWD
TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFSGHLADITCTRFHPNSNYVATGSSDRT
IRVWDVLSGNCVRIFTGHKGPIHSLAFSPNGKFLASGATDGRVLLWDIGHGLMVGELKGH
TDTIYSLRFSRDGEILASGSMDNTVRLWDVMKAFDDLETDDFTAATGHIHLQDNSQELLL
GTYTTKSTPVIHLHFTRRNLLLAAGAFNP
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtacaaggtggtatgagcgacgctgacatagaaacggacattaaaacagaa
ccatcaaccgatggctttggaaataacaatgctaacgatggtagagtgctctctgcgtct
cccggctccggctcttcgactggaagcaacaaacaaacagccgcggttaccccggaggac
cagcagacattgctggcagtcctgcaattcctcaaaaagaacaaactcatcgagtccgtc
gagattttgcgtcgtgaggcgggattaccggaaaattcactggacccgaaggcaactgaa
tcggccggggcaggatcgggaggtgctgccggtattgtggacttagaaggcggggatgtg
agctctcttctcagccgagttaccggatcatcctccgccggagcccaggcgccaacgaaa
gttgcagaggaccagccagatgtccgtgtggtactgtcagcttacagccagcagggagat
ccaactctttatgaggtctactacagtgacctcaaaaagttcatagaaacagtattggac
tgtcacagagctgaactgtcccaggtcttctacccactttttgtccacatgtatctggag
ctggtgtacaacaaccatgaaagtgaggctaaggccttctttgaaaagttcagtggggac
caggagtgctactatgaagaggacttgcgtgttttatctggcttgacaaagaaggagcac
atgagaggcaacgagactttgttggacttccgcaccagcaagtttgtcctgcgtatctcc
cgcgactcctatcagttgctgaagagacacttgcaggagcgtcagaacaaccagatctgg
aatattatccaagagcacctctacattgatatctttgatggcatgccacgcagcaagagc
cagatagatgcaatgtctggcagcttggcaggagaggccaagcgtgaagccaataaaact
aaggtttactatggattgctgaaggaaccagaaattgagctgccccttgatgatgaggat
gaggaggcagagaatgaggagggtaaacccaagaagaagaagccaaaaaaggacagcatg
ggctccaagagcaaaaagcaggatccaaatgctccttcacagaataggatacccctgcca
gaactcaaagactcagacaagctggacaagatcatgtacatgaaggaggccacgaaaagg
attcgtctaggatcagataacctcccctctgtctgcttctacacttttctcaatgcatac
cagggtctgactgcagtggacttcactgatgactccagcctgatcgcaggaggctttgct
gactccacagtacgagtgtggagtgtcacaccgaaaaagctccgcaaagtcaagtctgca
gcagacttgaacttgattgacaaagagtcagacgatgtgctggaaaggatcatggatgag
aagacggccagcgaatcaaagataatgtatggacacagtggaccagtgtatggcatcagc
ttcagcccggacagaaactacttgttgtccagttcagaagatggtacagtaaggttatgg
agtctcctaacgtttacttgtttggtggcctacaaagggcacaactacccagtgtgggac
acgcagttttccccctatggctactattttgtgtctggaggacatgacagggtagcccga
ctctgggcgacagatcactaccagcctctgcggatattttctggtcacctggctgacatc
acttgcactcgttttcacccaaactccaattatgttgccacaggatcatctgaccgtacc
atccgtgtgtgggatgtcctaagtggaaactgtgtgcgcatcttcactggtcataagggt
cccatccattcactcgctttttcccccaatgggaagtttttggcatcaggggccactgat
ggcagagtcctcctgtgggacattggccatggattgatggtgggagagctcaagggccac
acagataccatctattccctcaggttcagcagggatggtgaaatccttgcttccggttct
atggacaacacggttcgcctgtgggatgtaatgaaagcattcgatgacttggaaacagat
gacttcacggcagctacgggacacatccatttacaagataactcccaggagcttctgcta
ggcacctacacgactaaatcaacacctgttatacaccttcacttcacccggaggaacctg
cttctggctgctggagccttcaatccttga
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