Maylandia zebra (zebra mbuna): 101472008
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Entry
101472008 CDS
T02814
Symbol
lrch1
Name
(RefSeq) leucine-rich repeat and calponin homology domain-containing protein 1 isoform X1
Organism
mze
Maylandia zebra (zebra mbuna)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
CH
LRR_6
CAMSAP_CH
Takusan
Motif
Other DBs
NCBI-GeneID:
101472008
NCBI-ProteinID:
XP_004566347
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Position
LG16:complement(6612382..6720702)
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AA seq
785 aa
AA seq
DB search
MATLGPESARPPLGSSPLVQAHIGSANLPPNRGLERALEEAAASGVLNLSCRKLKEFPRT
AANHDLSDTVEADLSKNRLTDVPSEVCHLVALETLNLYHNCIRSIPDSIISLQSLTSLNL
SRNQLGSLPACLCGLPLRVLNASNNKLVSLPETIGQLQRLMELDISCNEITALPRHIGRL
KALRELNVRRNLLCVLPEDLADLPLVKFDFSCNKVSTIPVCYRKMKQLQTLQLENNPLQS
PPAQICIKGKVHIFKYLSIEACRSEKMPDSLYLPVMGRINLSRPTTGSVEDMEQQKKQDS
DSGVGSDNGDKRLSATEPSDEDSLSLNVPMSHITEEGIGKDDSSEHISSLTADPNSDSVQ
LIEESPTEALRDQNRDSSLSTRFINYIKGRTAADFDEPLRIEEDSHWSTQQTSKVTGGTE
LHIDMINQLKEAVELLQDPSRVNTEEDLSGVQLYPVEMVTVDESLNGQDSDDGATSPKQH
MDEGGCEFQKKRQMILEKARFEAQLACREYEWHMSIKRNDRSPVSGPPSFSSPPFGLKPR
SAPPSLPCSPPPSSLDPSLLPQASPLHRDTPRSHDDGGNHNRVFLRSHKSLESVDPQFTM
RRKMEQLREELELMEQLRDSIESRLKVVLPEDLGSSLMDGVVLCHLANHIRPRSVASIHV
PSPAVPKLSMAKCRRNVENFLDACRKIGVPESSLCSPYDIIQCRLQPVRTTVRALVALDP
DRKREEAISAANPTSPGASETPLLVSVTTQTPPPAWQIWDLIGSSLVHILCLVLLFVAYS
WTELT
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgttgggaccggagtcggctcgcccccctctgggttcttctccgttagtccag
gctcacatcggcagcgccaacctgcctcccaaccggggcttggagcgggcgctggaggag
gcggcggccagcggcgtcctcaacctcagctgccgaaaactgaaggagtttccccggaca
gcagccaaccacgacctgtcggacacggtggaagcagacctgtcaaaaaaccgactaacc
gacgtcccctcagaggtatgccatctggttgccttggaaacactaaacttgtaccacaac
tgcatcaggtccatcccagacagcatcatcagcctgcagtcgctcacctccttaaacctc
agtcgtaaccagctgggctccctgccggcctgcctgtgtggtttacctctgagagtcctc
aacgccagcaacaacaagctggtcagcctgcccgagaccattggacaactgcagaggctc
atggagctggacatcagctgcaacgagatcacagctcttcctcgtcacatcggcagactc
aaagctctgcgcgagctaaacgtgcgccgaaaccttctctgtgtcctgccagaagacttg
gctgatcttcctctggtgaagttcgatttctcctgtaacaaagtgtccaccatcccagtg
tgttacaggaagatgaaacagctccagactctccagttagaaaacaatccactgcagagt
ccacccgcacagatctgtataaagggcaaagttcacatattcaagtatctgagcattgag
gcgtgtcgcagcgagaagatgcctgactctctctacctgcctgtcatggggcgaatcaac
ttatcaaggcccaccactggcagtgtggaagacatggagcagcagaagaagcaggacagt
gactcaggagtcggcagcgacaacggagacaagagactgtctgctactgagccgtcagat
gaagacagtctgagccttaatgtgccaatgagtcacatcacagaggagggaatcggcaaa
gacgactcgagtgaacacatcagctctctgacagcagacccaaactctgactcggtgcag
ctgattgaggagagccctacggaagccctgagagaccagaacagagactcttctctcagc
actcgcttcatcaactacatcaagggtaggacggcagcagacttcgacgagcccctcagg
atagaagaagactctcactggtcaacacaacaaacgtcaaaagtcacagggggcacagag
ctccacatcgacatgatcaaccagctaaaagaggctgtggaactgctgcaggaccccagc
agggtgaacacagaggaagatttgtctggagtccagctctatccagtggagatggtcaca
gtggacgagtcactcaacgggcaggacagtgatgacggcgccacatcaccaaagcagcac
atggatgaaggtggctgtgagttccagaagaagagacagatgattctagaaaaggccagg
tttgaagcccagcttgcgtgccgggagtatgagtggcatatgtcgatcaagcgaaatgac
agatctccagtgagcggacctccatccttctccagcccaccctttggactgaaacctcgt
tcggctccaccctcgctgccctgctcgcccccgccttcctctctcgacccctccctcctc
ccacaggcctcgcccctccatagagatacacctcgtagccatgacgacggaggcaatcac
aaccgggtgttcctgcggagccacaagagcctggagtctgtggatcctcagttcaccatg
agaagaaagatggagcagctgcgggaggaactggagctcatggagcagctgagagatagc
atcgagagcagactgaaggtcgtccttcctgaagaccttggttcgtctctgatggacggc
gtcgtgctctgccatctggccaatcacattcgcccacgctctgtcgccagcatccacgtc
ccctcacctgcagtgcccaaactcagcatggccaagtgtcggaggaatgtggagaacttt
ctggatgcctgtagaaaaataggcgtaccagagtcgtccctctgctcaccttatgacatc
atccagtgccgcctgcagccggttcgcaccacggttcgggcgctggttgccttggatcca
gacaggaaacgggaggaggcaatctcagctgcaaaccccacttcccctggggcatcagag
actcccttattagtttctgtaaccactcaaactccgcctcctgcctggcagatctgggac
cttattggttcgagcttagttcacatcctctgccttgttctgctcttcgtggcctatagt
tggaccgagctgacgtaa
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integrated database retrieval system
