Maylandia zebra (zebra mbuna): 101472044
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Entry
101472044 CDS
T02814
Symbol
vars1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101472044 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mze01007
]
101472044 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mze03016
]
101472044 (vars1)
Enzymes [BR:
mze01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
101472044 (vars1)
Amino acid related enzymes [BR:
mze01007
]
Aminoacyl-tRNA synthetase
Class I (U)
101472044 (vars1)
Transfer RNA biogenesis [BR:
mze03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101472044 (vars1)
Prokaryotic type
101472044 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
GST_C_2
Arc1p_N_like
Val_tRNA-synt_C
GST_C_3
tRNA-synt_1e
Spectrin_Anc-1
Jag_N
Motif
Other DBs
NCBI-GeneID:
101472044
NCBI-ProteinID:
XP_004550923
LinkDB
All DBs
Position
LG11:24831975..24847025
Genome browser
AA seq
1321 aa
AA seq
DB search
MASVLCRKRRLKPGTRCSFIASDGHSCGCVCVLTELTSLSVSFKEMTTLYVSPHPDDFRS
LLALLAAEYGPSSRPQIITEDPPASLNARSRPALVLAAAGDGDSLVSGATAVSWYLAFQG
KRAGLDAKQQSQVWQWLSFADNELTPVSCAVVFPLMGVTGVDKKLQQTSRAELMRVLKVL
DQALAPRTYLVGESITLADMAVATAVLLPFKYALEPSDRKAVTNVTRWFTTCINQPQFLK
VLGEIVLCEKMVPVTPKTNAATNAVNGSPAADSPGAPANGPPKTEAQLKKEAKKREKLEK
FQQKKEMEAKKKTQPPSEKKAKPEKKELGVITYNITTPAGEKKDVVSPLPDSYSPQYVEA
AWYPWWEKQGFFKPEYGRKSISEENAKGIFMMCIPPPNVTGSLHLGHALTNAIQDCLTRW
HRMRGETTLWNPGCDHAGIATQVVVEKKLMREKGMSRHDLGRENFIREVWKWKNEKGDRI
YHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRMHDEGVIYRSKRLVNWSCTLNSAISD
IEVDKKELAGRTLLPVPGYKEKIEFGVLVSFAYKVDGSDEEVIVATTRIETMLGDTAVAV
HPADARYQHLKGKMVLHPFCDRKMPIVFDDFVDMSFGTGAVKITPAHDHNDYEVGERHNL
AFINILDENGLLINVPPPFLGMKRFEARKAVLQALKDRGQFKEIKDNPMVVPVCSRSKDI
VEPLLKPQWYVDCRDMGKEAADAVREGRLKIIPDHHLKTWFNWLDNIKDWCISRQLWWGH
RIPAYFITVNDPSVKPGEDMDGHYWVSGRSEEEAREKAAKRFNVSADKITLRQDEDVLDT
WFSSGIFPFSIFGWPNENEDLQVFYPGTLLETGHDILFFWVARMVMMGLKLTGKLPFKEV
YLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLHAQLMDSNLDPVEVERAQQGQKSD
YPNGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLWNAVKFAMKTLGDNFV
PSEKVQLSGEESVSDRWILSRLSAAVTLCDAGFKAYDFPTITTAIYNFWLYELCDIYLES
VKPVFSKAEEDSMSQRQALVCRQTLYTCLEVGLRLLSPLMPFVTEELYQRLPRRKPQSDP
PSICVTSYPTTEEFCWNSEEVDRDMEFIMTIVKTIRSLRADYNLTKTRADCYLQCIDSAT
VSLVQKYSLQIQTLSYSQAVIPLTANQPVPEGCAVAIASDRCTVNLMLKGLIDVEKEVAK
LMTKKGDLEKQMEKLREKMGKNDYKEKVPVKVQEQDAEKLRQSQIELEKVKEAMDNFRKM
I
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgttttgtgccggaagcgacggctgaaacccggaactcgttgcagtttcatt
gcatcagacgggcattcatgtggctgtgtgtgtgtgctaactgagctgacgtctctgtct
gtttcattcaaagagatgaccactctctacgtgtctcctcaccctgatgacttcaggagc
cttctggctctcttagctgcagaatatggaccgtcctcccggccgcagatcatcacagag
gaccctcctgcatctctgaacgcccgctccagaccagccctggtgctggccgccgctggg
gatggtgactctctagtgagcggggccactgctgtgtcatggtacttagcctttcaggga
aagagggctggtctggatgctaagcagcagagccaggtgtggcagtggctcagctttgca
gacaatgagctcaccccagtgtcgtgtgctgtggtcttccctctgatgggggtgacagga
gtggataagaagctccagcagacttcccgtgcagagctgatgcgtgttcttaaggttctc
gatcaggctttggcaccaagaacctacctggtgggagagagcattaccctggctgatatg
gctgtagctacagcggttttactccccttcaaatatgcattggagccatcagacaggaag
gctgtaacgaatgttaccagatggttcacgacctgcattaatcagccacagttcctgaag
gtactgggggagatcgttctttgtgaaaagatggtcccagtcacaccaaaaacaaatgct
gctacaaatgctgttaatggcagtcctgctgctgactctcccggcgctccagcaaacggc
ccaccgaagacggaggcccagctgaagaaagaagcaaagaagagagaaaagcttgaaaaa
ttccaacagaagaaagaaatggaagcaaagaaaaagacacagccgccatctgagaaaaag
gccaaacctgagaagaaggaattgggagtgattacatataacatcaccacccctgctgga
gaaaaaaaagatgttgttagtccacttcctgactcctacagtcctcagtatgtggaggct
gcctggtatccgtggtgggagaagcagggcttcttcaagcccgagtatgggaggaagagt
attagtgaggaaaatgctaagggcatcttcatgatgtgcatccctccacctaatgtgaca
ggatcacttcacctgggtcacgccctcaccaacgccatccaagactgtctgaccagatgg
cacaggatgcgaggtgagaccaccctgtggaacccgggctgtgaccacgctggcattgcg
acccaggtggtggtggagaaaaagctgatgagagagaagggcatgagccgtcatgacttg
ggcagggaaaactttatccgggaagtctggaaatggaagaatgagaagggagaccggatc
taccatcagctgaagaaactgggctcttccctggactgggacagagcttgcttcactatg
gatcctaaactttcctatgcagtccaagaggcctttatccgcatgcacgatgagggagtg
atctacaggagcaagaggctggtcaactggtcctgtacactgaactctgccatctctgac
atagaggtggataaaaaggagctcgctggcaggactcttttgcctgtgcctggttacaag
gagaaaatcgagtttggggtcttggtgtcttttgcctacaaggtggatggatctgatgag
gaggtgatcgtggccacgactcgtattgagactatgcttggagacaccgcagtagccgtt
caccctgccgacgccagatatcagcatctgaaaggaaaaatggttcttcatcctttctgt
gaccgcaagatgcccatagtctttgatgactttgtggacatgagctttggaacaggcgct
gtcaaaatcaccccggctcatgaccataatgactacgaggttggagagagacacaatctg
gccttcatcaacatcttggatgaaaatggcctgctcattaacgtgcctcctcccttcttg
ggcatgaagcgttttgaggccaggaaagcagtgcttcaggctctcaaagacagaggccag
tttaaagagatcaaagacaaccctatggttgtcccagtttgcagccgttccaaggacatt
gtggagccgctgctgaaaccccagtggtatgtggactgcagagatatgggcaaggaggct
gctgatgctgtcagagaaggcaggctcaaaatcatccctgaccaccatctcaaaacatgg
ttcaactggctggacaacattaaggattggtgtatctctcggcagctgtggtggggtcac
cgtattcctgcttacttcatcactgtcaacgatccgtctgtgaaaccaggagaggacatg
gacggtcattactgggtgagtgggagatcagaggaagaggccagggagaaggcggcgaaa
cgctttaatgtgtctgcagacaaaattaccctcagacaggacgaggacgttctggacact
tggttctcgtctggcattttccccttttctatctttggctggcctaatgagaatgaggac
ctgcaggtgttttaccccggcaccttgttggagacgggccatgacatcctgttcttctgg
gttgcccgcatggtgatgatgggtctcaaactgacaggcaagctgcccttcaaagaggtt
tatctgcatgcagtggtacgtgatgctcacggaaggaagatgagcaagtctctgggcaac
gttatcgaccctctagacgtcattacagggatctccctggagggtcttcatgcccagctg
atggacagcaacttggatcctgtggaggtggagagagcgcagcagggccagaagtcagac
tacccaaatggcatcccagagtgtggcacagatgctctccggtttgctctgtgtgcttac
accagccaaggtagggatatcaacctggatgtcaaccgcatcctgggctaccgtcacttc
tgcaacaaactgtggaatgctgtgaagtttgccatgaagactctaggagacaactttgta
ccatcagagaaagtccagttatctggagaggagagcgtatctgacaggtggattctgtcc
aggctgagcgccgctgttacactctgtgacgccggcttcaaggcctacgacttcccaacc
atcaccactgccatctacaacttctggctgtacgagctctgtgacatctacctggaaagt
gtgaaaccagtattcagtaaagcagaggaagacagcatgagccagagacaagccctggtg
tgcagacagaccctttacacctgtctagaggttggtctacgcctgctgtctcccttgatg
cccttcgtcactgaggagctctatcagaggttaccacgaagaaaacctcagagcgatcct
cccagcatctgcgtcacatcatatcccaccaccgaagagttctgctggaacagtgaggag
gtggaccgcgacatggagttcataatgaccattgtcaagacgatccgatcgcttagggct
gactacaatctaaccaagaccagagctgactgctacctccagtgcatagactctgcaact
gtgtccctggtgcagaaatacagtctgcagatccagaccttgtcttattctcaggccgtc
atccctctgacagccaaccagcctgtcccagaaggctgtgctgtggctatcgcttctgac
agatgtactgtcaaccttatgctcaagggtctcatcgatgtggagaaggaagtggctaag
ctgatgacgaagaaaggggatttggagaaacagatggagaaactgagagagaagatgggg
aagaatgactacaaggagaaggtgccggtgaaggtgcaggagcaggatgctgagaagcta
cgacagagccagattgagcttgagaaggtgaaagaagccatggacaacttcaggaaaatg
atttaa
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