Maylandia zebra (zebra mbuna): 101472363
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Entry
101472363 CDS
T02814
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39
KO
K12012
tripartite motif-containing protein 35
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mze04121
]
101472363
Ubiquitin system [BR:
mze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101472363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
U-box
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-B_box
zf-Nse
Rab5-bind
zf-RING_10
zf-ANAPC11
CYP38_PsbQ-like
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
101472363
NCBI-ProteinID:
XP_004559591
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MALRPRASSQPLKLTFFQSSKLNSFLRPRAVSSQSGSMLEDELSCPICCEIFKDPVVLKC
SHSFCRACLQQFWNKKKARRECPVCRRKCSLTEPTVSLALKNVAETFLKEHGCRGATAGT
GAGDTGKQAVTVDFKCSTHEEVLKLFCLDDFEVLCCVCHTSKKHLGHRVCPIEEGAQDLK
AELKNELIPLKKNLRCLYEAKQECDDTTVHIKNQTQATEKQIKEEFEELREFLRREEEER
LATLQKDDKEKKELVKKKSDSIARDILTFSHAVIAIENEIASSDVNFLQNYTNTKKRAQI
LPKNPEKVSGALINVAKHVSSLKYHVWEKMVDLVQYTPITLDPNTAYSWLSLTSDLTSVA
NSGSLQQLPDNPERFGHFVFVLGSEGFTSGRHAWEVEVGDKVEWMLGVVKESIDRKGRIS
GCPEGGFWMISYFEGEYSAMTRPSTPLHLEGKLTRVRVQLDYDSGEVIFSNPVNMTPIYT
FNDFFTQKLYPFFCPGANINGNNPKPLKICPAKVAVWNSATW
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgcgcccacgcgcttcctcccagcctttaaagcttaccttctttcagagttct
aagctaaattcgttcctgcgacctcgagctgtttcgtcacagtcaggctccatgctggaa
gatgagctctcctgtcctatatgctgtgaaatcttcaaggacccggtagtgctcaagtgc
agccacagtttctgtcgggcctgtcttcagcagttctggaacaagaagaaggccaggcgt
gaatgtcctgtctgcaggaggaagtgctcgctgactgagcccacagtcagcttggctctg
aagaatgtggccgaaaccttcctgaaggagcacgggtgcaggggagccacagcgggaact
ggggctggtgatacagggaaacaagcagtgacagtagattttaagtgcagtacacatgag
gaagttctcaaactcttctgtctggatgattttgaagtcctgtgctgtgtgtgtcacacc
tccaagaagcacctcggacatcgagtgtgtcccatagaagaaggtgctcaggatcttaag
gcagagctgaaaaatgagctgattcctctgaagaaaaacctgcgttgcctctatgaagcc
aagcaggagtgtgatgacacaactgtgcatatcaagaaccagactcaggccacagaaaag
cagatcaaagaggagtttgaggagctgcgggagtttctccggagggaggaggaggaacgt
ctggccactctgcagaaagacgataaggagaagaaagagctagtgaagaagaagtctgac
agcatcgccagagatatcctcaccttctcccatgctgtcattgccattgagaacgagatt
gcatccagtgatgttaatttccttcagaattatacaaacacaaagaaaagagcacagatc
ctacccaagaatccagaaaaagtctcaggtgctcttataaatgtggccaagcatgtcagt
tccctcaagtaccacgtgtgggagaaaatggtggatctggttcagtacacacccatcacc
ttggatcctaacactgcctactcctggttatccctcacctcggatttgaccagtgtggcc
aacagcggatccctgcagcaactcccggacaatcctgaacggtttggtcattttgtgttt
gttctgggctcagagggttttacatcaggccgtcacgcctgggaggtagaggtgggcgac
aaagtggagtggatgctcggggtggtcaaagagtccattgacaggaagggccgcatctcg
ggctgtcccgagggcggcttttggatgatctcatactttgagggggagtactcagccatg
acaaggcccagcaccccgctgcatctggaggggaagctaactcgagtaagggtgcagctg
gactacgactctggagaggtcatcttctccaaccctgtcaatatgacacccatctacact
ttcaatgacttcttcactcagaagttgtaccccttcttctgccctggtgctaacatcaac
ggaaacaaccccaaacctcttaaaatctgccccgccaaggtggctgtgtggaacagcgcg
acgtggtga
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