Maylandia zebra (zebra mbuna): 101472438
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Entry
101472438 CDS
T02814
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04510
Focal adhesion
mze04512
ECM-receptor interaction
mze04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101472438 (col4a5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101472438 (col4a5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101472438 (col4a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mze04147
]
101472438 (col4a5)
00536 Glycosaminoglycan binding proteins [BR:
mze00536
]
101472438 (col4a5)
Exosome [BR:
mze04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101472438 (col4a5)
Glycosaminoglycan binding proteins [BR:
mze00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101472438 (col4a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101472438
NCBI-ProteinID:
XP_024656971
LinkDB
All DBs
Position
Unknown
AA seq
1657 aa
AA seq
DB search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NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
gcttgccatggatgtgcaggatccaaatgtgactgcagtggagtgaaaggagaaaagggt
gaaaggggtttcccaggtttgacaggacagccaggcgtcccaggattccctggaccagaa
ggaccaattgggcccagaggagagaagggaagtgatggacctcaaggaccaggtggtcca
aaaggaattagaggacctccaggaacaccaggatttccaggaacacccggactcccaggt
ctacctgggcaggatggtcctccaggtccaagaggagtgccgggttgcaatgggacaaag
ggtgacaggggtttcccaggaagtccaggaatccctgggcagccaggacttcaaggtcca
cctggtctgccaggacaaaagggagacccaggtgatgttatctccgccaatcgtttcgga
gagaaaggagcagtgggtttacccggtttgccaggaggtcctggccgacctggacctcca
ggtatacaaggtccggtaggtcccccaggacccagaggccttgagggtcgtccaggtgct
cctggtccacccgggcctaaggggaatatgggtttgaatttccaaggacccaaaggagaa
aagggtgccccaggtttgcaaggacctcctggtcctccaggacaggttggggagcagaca
aagccggctgagactgaaattcagagaggagacaagggtgaccaaggacctcctggccct
aaaggtgatccgggtttaccgggacctcctggtccctatggtgggcagaaaggagaaaag
ggagaaccaggagagctgggaaaacgaggaaaaccaggcaaagatggtgatcctggttct
ccaggatacccagggccccctggagagacaggccagcctggtcttccagggagggatggt
gagacaggacaaaaaggtgatcgtggattcccgggtccaccagggcaggtgattggcggg
ccaatagggaatcaggtggggcctaaaggtgaacctggcttacctggaacacctggactc
aaaggagacagaggagtacaaggtttgacaggccctccaggagaaccgggattcacagga
accggtagtgggggttttcctggacctcaaggtttcccaggagagcaaggtcagaaggga
gagattggccctccaggaaactttctgccaggccccccaggtcgtgcagggtctcctgga
tcccctggtccgccagggccccgtggacttccaggcacttcctcaggtcaagactgcata
ccaggacttcctggggttcctggtgcacaaggaggaagaggtttccctggagagatagga
cagaaaggtgagaaaggtgacacctgtgtgaactgcataggaagcgtcaatcccatccct
ggacctcaaggacctccaggacctcctggatttcctggacctcctggcgcccaaggtttc
aagggagacagaggttttccaggaacacctggctctgtcggccccagcggtcctcctggt
gctcaaggtcctcctggcctaaatggagagaagggagatccaggtgatcccatcagagtt
aatggtttgagtggagagaagggtgacactggtttccctggaccacctggtctgccaggt
ctggacggggcgcctggtcgtgacggagcccctgggcctccagggcctaaaggagctcct
ggctcattgttggtgaaaggagaacgaggcctccccggtgagccaggtttccctggtaat
ccaggagacaggggccccccaggtcttcctggctttggaaatccaggacctcgtggagag
agaggtatccagggtgtctcaggaagaccgggacctgttggtgcaccaggaactaagggt
gaacctggtcagacaatgacagagaaaggggccaaaggagaaagaggtcgggatggcgag
cctgggcagcctggttcaccaggtataccaggtcagcctggacagcctggttttcccggt
ttatcgggagcgaagggtgaacccggaatcccaggcattggactgccaggacctccagga
ccaaaaggattcccgggtgttggcgggcaaccaggagcccctggaggaccaggaagacca
gggatagatggacgtcccggtgagctgggatttcctggaccaaagggtgaacctggtctt
ggacttcctggtcctcctggtttaacgggtgcaccgggccctaaaggttccactgggcct
aagggagatcctggtttccctggtaaccccggtttgtcaggacggcttggagctgatgga
gctccaggattcaaaggcgagcctggtacacctggtacacctggatctcgtggcccccct
ggacccccctcttttggtggaacgggcccaccaggtctcccaggacctccgggcccaatg
ggaccaccagggctgccaggatcagatggtccaaaaggagaccctggccctccaggtcta
gacatcccaggcccaccaggagacccaggagctccaggttatcaaggtcttccaggtact
attggaaccccaggaccacctggaggacctggtcgcgatggtttgcctggcttgccaggt
cagaaaggagacatgggtcccaatggacctccaggaccttctggaggaccgggagcccca
ggaggacctggtgctcctggatttaaaggtgaaccaggatttccaggtagagacggtgca
ccaggtggtcctggtgctaaaggagagaggggagacatgggcctccagggaccgccagga
cccagtgttccatcgcagctcttaaagggacaaaaaggagatcctggaccttcaggtgga
acaggttttccgggtccaaaaggtgctactggtctccctggtgaccctgggtttccagga
acagatggcagtcctggccgccctggacctccaggttctaagggagattctggtcgccca
ggaggtccaggtattcctgggtctccaggacctaaaggccaaatgggagacatgggaatc
ccaggaccaccagggctgaaaggtgtttcaggagtgtcgggtataccaggatccccagga
cagccaggaccacctggtaaccaaggacccaaaggtgagccaggttctgctggcgtcgga
ccacctggactaaccggacaaaagggtgatccaggcctgccagggtacccaggaaatcca
ggcctaaaaggaaacccgggattaccaggtcccacaggtgtgacgggaagaccaggcgat
aaaggtgaccccggactcccaggattccaaggtcctcctggtatccccggtcctaagggt
cttgacggtgtgcccggtaccccaggtagctcaggagctccaggtagaccaggagaacct
ggtccacaaggacagtctggtccaccaggagagaaaggtcaggcaggtcgcgatgggatt
ccaggaccagctggagtcaaaggagaagcaggaattccaggttacggtggtccaggtcct
gctggaagtccaggactgccaggtatcaagggagacacaggtcctcctggtgtacccggc
aaccctggttttcccggccctaaaggagacccaggctcacctggtggccctggtgaacaa
ggtgcccctggctttcctgggcctgctgggctgtctctgccaggccctaaaggtgccaca
ggaccccctggattacctggaagagcaggccctgcaggtcctccaggttcacctggccta
caaggtcctcgtggactcccaggaactggtggcgttaagggagaaaagggtactcttggc
atgcctggaattcctggcatccccggacagaagggagatcctggttttccaggaaatccg
ggcatacctggtcctactggccccgctggaataaagggagattcaggacagcctggtgtt
cctggattccctggattgaagggtgatcttggatatcctggccccagtggccctcctgga
gatcgtggattacctggagaacggggcactccgggtgatcccggtgaaggttcgcctccc
attgtgctaaagggagaacggggacccccaggtcttcagggcctacctggttctccagga
ccacctggtttgcctggccaacctggaggctcaggcatcaaaggtgaccctggtggacct
gggagcgatggtcctcctggcttcaacggacctgccggcaggaagggagacattggtccg
gcaggtcagcctggtcagcctggcaaccctggtccccgtggttcagatggcccacaaggt
cctcccggtgtcccaggatcagtttctgctgctcacggtttcctcatcacccgccacagc
cagaccaccgatgacccagagtgccccactggaactaagtttatctataacggatactct
ctgttgtacgtgcagggcaacgagcgggcacacggacaggaccttggcacagccggtagc
tgcctgcgcagatttagcaccatgcccttcatgttctgcaatatcaacaacgtctgcaac
ttcgcatcccgtaacgactactcctactggctgtcaacggacagacccatgcccgaaaac
atggcccccttcgtgggagagaatatcaggcctcatgtcagcagatgtagagtctgtgaa
gctcccgccatggtgattgcaattcacagtcagactatccagattccttcttgccctgaa
aactgggaagtactgtggattggatactcctttatgatgcacaccagtgcgggtgcagag
ggctccggtcaggcgctcgcctcccccggctcctgcctggaggagttccgcagctcccct
ttcatcgagtgccacggcagagggacatgtaacttctatgccaactcctacagcttctgg
ctggccaccgtggaaacttctgagatgttcagaaagccccagtctgagacctacaaggca
ggtagcctacggacacgtgtgagccgctgtgcagtctgcatgaagcgcacgtaa
DBGET
integrated database retrieval system
