Maylandia zebra (zebra mbuna): 101472490
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Entry
101472490 CDS
T02814
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101472490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mze03000
]
101472490
03021 Transcription machinery [BR:
mze03021
]
101472490
03036 Chromosome and associated proteins [BR:
mze03036
]
101472490
Transcription factors [BR:
mze03000
]
Eukaryotic type
Helix-turn-helix
ARID
101472490
Transcription machinery [BR:
mze03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101472490
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101472490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
101472490
NCBI-ProteinID:
XP_012778230
LinkDB
All DBs
Position
LG22:26386333..26442330
Genome browser
AA seq
2307 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDTQEESVPGEKQHENKEPGPDGGSPGQKELQDGTDA
GNAGGGGDPDMKNGNGNLPRVNNNSSNQNDTGGPEGNNHPGMGHHHPGPFPPPPYGYNQH
YTRAPFHQHGGQQSPGMAAASGPGMMDSYXPNSHEHGYPNHYNNYSPFQNRTSYQGPGYG
AMNSPRNNQPPAGGQPGKQQPAGGTTAMAASYNNQRYNMGNQQPTSTPTLNQLLTSPSPT
RSYPNYPQGDYNNQEGANKGPGDMGSSQYGGVHPAWQQRTHHPPPMSPGNTGQPPNRNQP
PGPMDQVGKMRSQPYGGPNPFSQQQQGPPTGPGPQQAGSYPGQGYGPPGPQRYPIGMQSR
PPGTMSGMQYGQQMSAYGQQGPGGYGQQSQGYYGQHGPAPHPGQQQPPYSGQPQGTSGPS
YPQQGHPSQTPGQHGQPGPPYQQSQGPHGPPQSQPPYSQPQQSQPGQPPYVSPQQQQSQQ
QQQQQQQQGPGPQSQQGSQGQPGYPQPSGPGQPPQQQTPQQQGPPQQQQPPQQQQQQQQQ
QQQPGGPPPQAQQPPGHGQQGQPSPYSQTPPLQQQQQQQQQQQQQQQPPQQQQQQQQSPY
QRFPPPPQELSQDSFSSQSSAPPSNQPNKSSQEDSMQARPSSLPDLSGSIDDLPTGTEGA
LSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVTPSRTGPLSP
AAVPGNQMPPRPPSVQSDSIMHSSMSQDRVYMRNPQMPPYGSPGQPGSALSPRQSSGVQI
HGGMGPYPQNNTMGNYVPQGGQYGPPGYPRQPGYTGMPNANYPSGPGMGGSMNPIPGQGS
GAPYGSMPPGRIGPGQMGTRPYGPAMASNMGGMPPQVGSGMCPPPVMTRKDGGPSVHHGP
TNSIHNRPPSYPNMSQGMMGAGSPYGPGMNSMHSMINQGGPGPYPMAGANIANNSPGMAP
SSEFGMDKMNPAPKMNNKVDGTPKPESKKKSSSSTITNEKITRLYELGPEPERKIWVDRY
LAFAEEKAMGMNNLPAVGRKPLDLFRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSS
AASSLKKQYIQCLYAFECKMERGEDPPPDFFNTDTKKNQPKIQPPSPAGSGSLQGPQTPQ
STTSSMAEGGDLKPPTPASTPHTQMPPMPGVRSSVNLQDPFADGGDPAFPRRNAMTPNSQ
GYQPGIGTPEMMGRMGPYESNKDPFGGMRKAGEQFMPPGPNSGMGEQYNRGPPGPMANMP
MSQRQQYPYGYERRQEPGMGPDVNMGPGAPQPNMMPSGADTGMYSPSRPPPQQRHESYTN
QFPGQGAPPGGPYPNQQPGMYPQQQPNYKRPVDGGYCPPAKRHEGEMYSVPYSGQQQPGP
QSSGPQGQQDMYNQYNAYPGGERRPPGPQNQFPFPFGRDRGPSSAGPNSQSPMPPQMMAS
PMPSGPDGSQGPMWQGRNEMGYPNYPNRQGPPVSGQGPGYHGMNRSEDMMPSDQRMNHEG
QWPGHANQRQPPFVPAGSGPPMTRSLPSTYSASQNHIPQVSSPASMPRSMESRTSPSKSP
YMHPGIKVQKAGPPVPASHIGQAPVQQPMIRRDVAFPPGSVEATQPHLKPRRRLTMKDIG
TPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSISTFNLCQLPGFLELVVEYFRRCLI
EIFGILKEYEVGDPGQRTLIDPNAAEDSDDEIPMPEGEDMNSDEEDEEDEEVEETKINPD
TSSLVQIKEEEEEEENSHKDKSSEDEEDEKERESSIKEANTSTSGFSHNPSIHSEKPKQA
SKFDKLPIKVVRKKNPFRLNRLSKLGQRQSFDSGLIHWSVGGGDTTEHIQTHFESRMELL
KQRKQTTAAADNRKKVKVNGTAAAAENPEKPKSSGDDKVRQQQPQFSEPHKSPTKTTTPP
LPIGAPVTATIDDVLSARPGSVTEEVVRGGAEEQKENGKYLFSINPDLQSRRNIKILEDE
PHSKDETPLSTLSDWQDSLARRCICVSNIVRSLSFVPGNDLELSKHPGLLLLLGRLVLLH
HRHPERKQAPVTYEKDEEDEGVSCERDEWWWDCLEVLRENCLVTLANISGQLDLSIYPES
ICLPLLDGLLHWAVCPSAEALDPFPTLGPHGSLSPQRLVLETLSKLSIQDNNVDLILATP
PFSRLEKLYGSLVRLVGERKVAVCREMAVILLANLAQGDSLAARAIAVQKGSVGNLLGFL
EDSLAATQYQQSQSSLLQMQGGPQFEPTSVDMMRRAARALHALAKVEENHSEFTLYESRL
LDISMSPLMNSLVSQVICDVLFLIGQS
NT seq
6924 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgctagcgtcgccactctcaacactagcccgccatccgaactaaaa
aagccggatcgggacacacaggaggagtcggtaccgggagagaaacagcatgaaaataag
gaaccgggacctgacggcggatctcctgggcagaaggagctgcaggacgggaccgatgct
ggaaatgctgggggaggaggggatcctgacatgaagaacggcaacgggaatttacccagg
gtaaataataatagcagtaatcagaatgatacaggcgggcccgaagggaataaccatccc
gggatgggacaccaccacccgggcccctttcctccacctccttacggttacaaccagcac
tacacccgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgca
tcggggccgggcatgatggactcttacncccctaattcacacgaacacggctaccccaac
cattacaacaactacagcccgttccagaacaggacttcttaccagggcccgggatacggg
gccatgaattccccgcgtaacaaccagcctccggctggggggcagccaggcaagcaacag
ccagcaggaggaaccacagctatggctgcctcttataataatcagagatataacatggga
aaccaacaacctacgtctacgccaactttaaatcagcttttgacatcccccagccctacc
aggagctacccgaattatccccaaggagactataacaatcaggagggggccaacaaggga
ccaggggatatgggcagcagtcagtatggtggggttcatccggcttggcaacaaaggacc
caccatccgcctcccatgagcccgggaaacactggacaacctccaaacagaaatcagcct
ccaggcccaatggaccaggtagggaagatgcgcagccaaccatatggaggacccaacccc
ttctcgcagcagcagcaaggacctcccacagggcctggaccccagcaggcaggctcttac
ccagggcagggctatggccctccgggccctcagaggtaccctattgggatgcagagccga
ccacccggaaccatgagtggcatgcaatacggacaacagatgtcagcatatggacaacag
ggcccaggaggctatggacagcaaagtcagggctactatggtcagcatggccctgcgcct
caccctggacagcagcaacctccatactctggccaaccccagggaacctctggaccttca
tacccccaacagggccatccttcacagactccaggccaacacgggcagccaggaccccca
taccaacaatctcaaggtccccacggccctcctcagagtcaacctccgtatagccagccc
cagcagtctcagccaggacagccaccctatgtatctccccagcaacagcagagtcaacaa
cagcagcagcagcagcagcagcagggacctggtccgcaaagtcagcagggctctcagggc
cagcctgggtacccgcaaccctctggtccagggcagccaccacagcagcaaaccccacaa
caacaagggcccccacaacaacaacaaccaccacaacaacaacaacagcagcaacaacaa
caacaacaaccaggaggtccacctcctcaagcccaacagcctccaggtcatggccagcag
ggccagccatcaccatattctcagactcccccgctgcaacagcagcagcaacaacaacaa
caacagcagcagcagcagcaaccaccacaacaacagcagcagcagcagcagtcaccttat
cagaggttcccacctcctccacaggaactctcccaggattccttcagctcacagtccagc
gctcctccatctaaccagccaaacaagagcagtcaagaagacagcatgcaggcgcggcca
tccagtctgccggatttatccggctccatcgacgaccttcccactggtacagaaggcgct
ttgagcccgggtgtcagcacctcgggcgtgtccagcagccagggcgagcagagcaacccg
gcccagtcacccttctccccgcacacttcgcctcaccttccgggcatacgtggaccctcg
ccgtcacctgtgggttccccagctagcgtcaccccttctcgcaccggccccctgtccccc
gctgctgtgccaggtaatcagatgcctcctcggccgcccagcgtccagtcagacagcatc
atgcactcatccatgagccaggacagagtgtacatgcgcaatcctcagatgcctccttac
gggtcccctggacagcctggctcggccttatctccacgccagtcttcaggagtgcagatc
catggtgggatgggcccttatcctcagaacaataccatgggaaactacgtccctcagggg
ggccagtacggcccgccaggttatcccaggcagcccggctacacagggatgcccaacgcc
aattaccccagtggccccggcatgggtggctccatgaaccccattcccggtcagggcagc
ggggctccgtatggaagcatgccaccgggcaggataggtcctgggcagatgggcactcgg
ccttacggtcctgccatggcctccaatatgggcggcatgcctcctcaggtggggtccggc
atgtgtccccctccggtcatgacgaggaaggatggtggtccttccgtgcaccacggacca
acaaactctatacacaacaggccacccagctatcctaacatgtcccagggcatgatggga
gcaggctctccgtatggcccaggcatgaacagcatgcacagtatgataaaccaaggtggg
ccagggccgtatccaatggcaggagcaaacatagccaacaatagccctggaatggctcca
agttcagagtttggcatggacaaaatgaatcctgctccgaagatgaacaacaaagtggac
gggactcccaagccagaatccaagaagaagtcgagctcttccaccatcaccaatgagaaa
ataacccgtctgtacgagcttggcccggagccagagaggaaaatttgggtggaccgatac
ttggcctttgctgaggagaaagccatgggcatgaacaatcttcccgctgtgggccgtaag
cccctcgatctcttcaggctctacatatccgtcaaagagatcggcggcctcacccaggtg
aacaagaacaagaagtggagggagctggctaccaacctgaacgtgggcacgtcgagcagc
gcagccagctcgctcaaaaaacagtacatccagtgtttgtacgcctttgagtgcaaaatg
gagcgcggcgaggaccctcccccagacttcttcaacacggacaccaaaaagaaccagccc
aaaatccagcctcccagcccagctggttctggatccctgcaaggaccccaaacccctcag
tcaaccactagttcaatggcagaggggggagacctgaagccccccacaccagcctccacc
ccacacacgcaaatgcccccaatgcctggcgtaaggagtagtgttaatctacaggatccc
tttgctgatggcggagacccggcgtttcccaggaggaacgccatgactcccaactctcag
ggctatcagcctgggataggcaccccggagatgatgggtcggatgggtccctacgagtcc
aacaaggacccttttggaggcatgaggaaagcaggggaacagttcatgccacccggcccc
aacagtggaatgggggaacagtataacagaggtccaccaggcccaatggccaacatgcca
atgagccagaggcaacagtacccgtatggatatgaacgaagacaagagccaggcatgggc
cctgatgtcaacatgggaccgggagctcctcagcccaacatgatgccttctggagctgac
acagggatgtactcgcctagccgtcctccgccacagcaacggcatgagtcctatacaaat
cagttccctggccaaggagctccccctggtgggccttacccaaatcagcagccaggaatg
tatccacagcagcagccaaactacaaacgtcctgtggatggtgggtattgtcctcctgcc
aagcgccatgagggagaaatgtacagcgttccttacagtgggcagcaacagccaggaccc
cagtcctcggggccccagggccagcaggacatgtataatcagtataatgcataccctgga
ggggagcgccgaccgccaggcccacagaaccagttccccttccccttcggacgggatcga
gggccgtcatctgcaggccccaattcccagtctccgatgcctccccaaatgatggcaagt
cccatgccttcaggccccgatggttcccagggcccaatgtggcagggccgcaatgagatg
ggctaccccaactatcccaaccgacagggaccccctgtgtcgggccagggtcccggctac
cacggcatgaaccgctcagaagatatgatgccatcagatcagcgcatgaaccacgaggga
cagtggcctggccatgccaaccagcgacagcctccgtttgtccccgcaggctccggacca
cccatgaccagatccctgccctccacctactcggcttcccaaaaccacattcctcaggtg
tcgagcccagcatccatgccccgatccatggaaagcagaacgtcgcccagcaaatccccc
tatatgcatcctggaattaaggtgcagaaagctggacctccagttcccgcgtcccacatt
ggccaggctcccgtgcagcaacccatgatccggcgagatgtggccttccctcctggctct
gtggaagctacccaaccccacctgaaaccccgcaggcggctcaccatgaaagacattggc
actcctgaggcttggagggtaatgatgtcattaaagtctggcttattagctgagagcacc
tgggccttggacaccattaacattctgctgtatgatgacaatagcatttctacttttaac
ctttgccagctacctggatttctggagctggtagtggagtacttcagacgctgtctcatt
gagatctttggcatccttaaggagtatgaagtaggagaccctggccagcgcaccctaata
gaccccaatgcagctgaggactctgatgatgaaattcccatgcctgagggcgaggacatg
aactcggacgaggaggacgaagaggatgaggaggtagaggaaacaaagatcaatcctgac
acttcttcactggtccagataaaggaggaggaggaggaagaggagaactcccacaaagat
aagtcttcagaggatgaggaagatgagaaggaaagggagtcttctatcaaggaagccaat
acctctacctcagggttctcccacaaccccagtatacactcggaaaagcccaaacaggct
agcaagtttgataaactccccatcaaggtggtgcggaagaagaatcccttccggctaaac
cgcttgtccaagcttgggcagcggcagagctttgacagcggcctgatacactggagcgtg
ggtggtggtgacactactgagcacatccagacccactttgagagccggatggagcttctc
aagcagcgaaaacaaacaacagcggccgctgacaaccgcaagaaggtcaaggtgaatggg
acagcggcagcagcagaaaacccagagaagcctaaatccagtggtgacgataaggttcgg
cagcagcagccccagttttctgaacctcacaagtctccaacaaagactaccacgcctcct
cttcccattggcgcaccagtcactgccaccattgacgatgtactatccgctcgcccgggg
tcggtcacggaggaagtagttcgtggaggtgccgaggagcagaaggagaacggcaagtat
ttgttcagcatcaaccccgatctccagagccgccgcaacatcaagatcctggaggatgaa
cctcacagcaaggatgaaacgccacttagcactctatcagactggcaggactcgctagct
cggcgctgcatctgcgtctccaacattgtgaggagcctctccttcgttcctggcaatgac
ctggagctgtccaaacaccctggcctcctgttgctgttgggccgcctggtgctgctccac
cacaggcaccctgaacgcaaacaggcgcctgttacctacgagaaggacgaggaagacgaa
ggcgtgagctgcgagagagacgagtggtggtgggactgccttgaggtgttaagggagaac
tgcctggtcactctggcaaacatctccggccagctggacctttctatctacccagagagc
atatgcctgcctctccttgatggcctgctccactgggctgtgtgcccttcagcagaggcc
ttggatccctttcccacgctggggccccacggctccctttcaccccagagactggtcctc
gagaccctcagcaagctcagcatccaggacaacaacgtcgacctcattctggccactccg
ccattcagccgcttggagaagctctacggctcgctcgtgcgactcgtcggcgagcgcaag
gtggccgtctgccgtgaaatggcagtgatcctgctagctaacctagcccagggtgacagc
cttgcagcgcgagcgatcgctgtgcagaaaggcagcgtgggcaacctactgggcttcctg
gaggacagcctagcggctacgcagtaccagcagagccagagctccctgctacaaatgcag
ggtggaccccagtttgagcctactagtgtggacatgatgcggcgggcagcgcgggctttg
cacgccctggctaaggtggaagaaaaccactctgaattcactttgtacgagtcgcggcta
ctggacatctcgatgtccccacttatgaactctctggtgtcccaagtaatctgtgatgta
ctgtttctgatcggccagtcatga
DBGET
integrated database retrieval system
