Maylandia zebra (zebra mbuna): 101472569
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Entry
101472569 CDS
T02814
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101472569 (wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mze03009
]
101472569 (wdr43)
Ribosome biogenesis [BR:
mze03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101472569 (wdr43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Utp12
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_VPS8
EIF3I
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_ACSF4
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
PEP5_VPS11_N
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
Beta-prop_Nup120_160
Paf1
WD40_2
NBCH_WD40
Tricorn_2nd
AHSA1
SGL
Kelch_2
WDR54
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
101472569
NCBI-ProteinID:
XP_004559322
UniProt:
A0A3P9BQ80
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Position
LG19:complement(15900068..15918094)
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AA seq
650 aa
AA seq
DB search
MAADGGSSSLQLPCVFSPKSRQFLALCAQDGRLRIWNTDSKTLHQEYVPSAHLSATCTCI
AWGPCRTVKEGPQRKKRKSEAVQVEEKADLLAMGTAAGTVLIYSTAKGALHCTLNGAHSG
GVNCVQWHPEESLLYSGSDDTNIVEWDLQTGKTRSKWKADHAAVTSLCVSPDGKLLLSAG
HIIKMWDLDTKEVYRKFTGHSTAVTTLRFATTRPPDSNGLYFLSGAAHDRLLSVWQVRED
GKDKNSVVSFTLTDEPQHIDLVTSNSKEEAVRLAVVCKDGQLHLFEHFLNGPCKKPLSPS
CTVQMSDTKESPIPIPLLAAVLGADTRTVMLAYGSHLQPVMEKVEINTAERHVCLTRDVQ
TTLSLSMETTVSKVKTPIVNAKSKVLVPGLPGHKAPLKGTSQGSEKRKKDTDTKEMSIAE
RLGEIDLSTVSEKGASKGTASLTTDNFAVLLVQGLESNDASILNKVFQTRKEMVIKKTVA
RLPLSAVLPLVEELTKRLQGHPFTAALMVRWLKAVLMHHTSYLASLPDLVTQLGVLYHMI
ESRVKMFHKLTKLDGKLYLLMTQMATSDSSNVVSDVDHTAKLVYEDESSDEDEASGDEGL
PDEDSDHWEEDEAMTEDNQEESEDEDPGSRTESKANGEEDMEHENESEEE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgacggtggcagttcttcgctgcagctaccctgcgttttttcacctaaatca
cgacagttcttagcgctgtgtgcccaggatggcagacttcgaatttggaacacagatagt
aaaacacttcaccaggaatacgtgccttcagctcatctgagtgccacctgtacgtgcata
gcctggggaccatgccggacagtcaaggaggggcctcagaggaagaagaggaaatcggag
gcggtgcaggtggaggagaaggcagacctgttggccatgggcacagcagctggaactgtg
ctcatctatagtacagcaaagggagcattgcattgcaccctgaatggagcccacagtgga
ggagtgaactgtgtccagtggcaccctgaagaaagcttattatacagtggttcagatgac
acaaacattgtagagtgggacttgcagactggcaagacaagaagtaagtggaaggcagac
catgcagcggtgaccagtttgtgtgtgagccctgatggtaaactgctgctgtcagctgga
cacataataaagatgtgggacttggacaccaaggaagtttacaggaagttcacaggccac
tccacggctgtgacgaccctgcgctttgccaccacacgaccccctgacagcaatggcctc
tactttctgtcaggtgctgcccatgatcgactgctcagtgtatggcaagtacgagaagat
ggaaaagacaagaactcagtggtgtccttcacactgacggatgagccgcagcacattgac
ctcgttacatccaacagcaaggaagaggcagtgaggctggcagtggtgtgtaaggatggg
cagttgcacctctttgagcactttttaaatggcccctgtaagaagcccttgtcaccatca
tgtacggtgcagatgtcagacacaaaggagtccccgatcccaatcccactgctagcagcg
gtgcttggagcggatactcgaactgtgatgctggcgtacggcagccacctacagccagta
atggagaaagtggagatcaacacagcagagagacatgtgtgtttgacccgggatgttcag
accactttgtccctttccatggaaaccacagtctccaaggtgaaaactccaattgtgaat
gccaagagcaaagtgctggtcccaggacttcctggtcacaaagccccacttaaaggaacc
tcacagggatcagagaagaggaaaaaagacacagacaccaaagagatgtcaatagcagag
cgacttggtgaaattgatctgtctacagtctctgagaaaggagcatctaaagggacggct
tcgttaacgacagacaattttgcagttctgctggtgcagggcctggagagcaatgatgct
agcatcctgaacaaagttttccagactcgcaaagagatggtaataaagaagacggtggct
cggttacccctctctgcagttctaccattagtggaagaactcacgaagaggctccaaggg
cacccgtttacggcagccttaatggtacggtggctcaaggctgtacttatgcaccacaca
tcatacctagcatcgctgccagaccttgttacccagctgggagtcctttatcacatgatt
gagagcagagtgaagatgttccacaagctaacaaagctggatgggaagctttatctccta
atgacacagatggcgacaagtgacagcagcaacgtggtttcagatgttgaccacacagct
aagctggtctatgaagacgagtcatctgatgaagatgaggcatctggtgatgaaggtctt
cccgatgaagactctgatcactgggaggaggatgaggcgatgacagaagacaaccaggag
gaatcggaagacgaggatcccggcagcagaacagaatccaaagcaaacggcgaggaggat
atggagcatgaaaacgagagtgaagaagaatga
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