Maylandia zebra (zebra mbuna): 101472685
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Entry
101472685 CDS
T02814
Symbol
dicer1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mze03036
]
101472685 (dicer1)
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101472685 (dicer1)
microRNA pathway
RISC loading complex
101472685 (dicer1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Dicer_PBD
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
DEAD
ResIII
Cas3-like_C_2
DSRM_2
dsrm
Motif
Other DBs
NCBI-GeneID:
101472685
NCBI-ProteinID:
XP_012778180
UniProt:
A0A3P9CLL0
LinkDB
All DBs
Position
LG19:complement(278461..310536)
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AA seq
1906 aa
AA seq
DB search
MAGLQLVTPATSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALERNTIVCLNTGSGK
TFIAVLLTKELSHQIRGPYQENAKRTVFLVNTAASVVQQAAAVRTHSDLSVGEYTDLEET
LAWTDQRWSRQIIENQVLVMTCHIFLHVLRNKILPLSKINLVVFDDCHLAITDHPYCQIM
KLFEGCSCTPRILGLTASILNGKCDPSELEQKIQNLERILKSNAETATDLVVLDRYASQP
REVVLDCGSYVDKSGLSSRLQAELNEALHFLNDCNISVVKEDRDPTFISKQVLNDCRAVL
QVLGPWCADKAAGIMVRELQKYIKHEQEELSRKFLLFTDTILRKVHALCEEHFSPACLDL
KFVTPKVLRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEEVEAKERP
EANFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKNQAR
NKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSK
GRARAPVSNYIMLADTGRTKAFEEDLSTYKAIEKILRNKCSKSVEVSEFEVEQVMDDDNI
LPPYVLRSEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTVEMGDGCFQSTLYLP
INSPLRVPVKGPVMNCARVAEKAVALVCCEKLHKIGELDDHLMPVGKETVKYEEELDLHD
EEETSVPGRPGSTKRRQCYPKAIPECLCDCYAVPEQSYYLYVIGMVLTTPLPDELNFRRR
KLYPPEDTTRCFGILTAKPIPRIPHFPVYTRSGEVTISIELQKSGFTLTTAQLDLITRLH
QYIFSHILRLEKPALEFMPTMADSAYCVLPLNVVGDSNTLDMDFKFMEGIEKSEARTGIP
TTQYTKQNPFTFKLEDYQDAVIIPRYRNFDQPHRFYVADVYADLTPLSKFPSPEYETFAE
YYKTKYNLDLSNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNK
QILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASEAGVGVQTLPPDFR
YPNLDFGWKRSIDSKTFISCPESCSEEGASHCKHQETISPDPSSLMLPSGEHSSMSEQED
FKALDSEEAPCTRNLTNGTAFFASCDDGNQNEHLPQCDNCQCSQLSFAGLQSSKSVQSTT
SVLVQPPHTLKKPNSSPPQPSDECTSGRTSDHTKKATSVCSRAATSPNTLTAPSDVCARP
QHGSHAANSPKSLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPD
AHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSSTDRM
NSEEAKEELLANGRSGHEYDEDDDEGEDVDEDGELMLKDEPKDEVNMEDDLEYYKEHIRF
IDNMLLGSGAFGKKISLSGFPPNLTPASGSSPAMESPYDWKTPKKPSHPTAAHYPTEQVP
SGPSPEEFDYSSWDAMCYLDPSKAGEEDDFVVGFWNPSEENCGTELGKQSISYDLHTEQC
IADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPLERGPPTGAAAQVHTHTQVAD
LCYGWLKIPPRCMLDHPDAERTLNHLISGFENFEKKINYTFKNKAYLLQAFTHASYHYNT
ITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHK
YFKAISPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLA
GAIYMDSRMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDG
KVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVQNN
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atggctggcctacagcttgttactcctgccacctcacccatggggcctttctttggtctt
ccatggcagcaggaggctattcatgataacatttatacacctagaaaatatcaggttgaa
cttcttgaagcagctcttgaacgcaataccatcgtctgcttgaatactggctcagggaag
accttcattgcagtacttctaacaaaagagctctcccaccaaatacgtggaccttaccaa
gaaaatgcaaagaggactgtttttctagtgaacacagctgcttctgtagttcagcaagca
gctgcagtcaggactcactctgacctcagtgtgggagagtatacagatctggaggagacc
ttagcatggactgaccaacggtggagtcgacagataatagaaaatcaggtgctggtcatg
acttgccacatattccttcatgttctgaggaataaaatcttaccattgtcgaaaatcaac
ttggtggtgtttgatgactgccacctggccatcacagaccacccttactgtcagataatg
aagctgtttgagggctgctcctgcactcctcgtatccttggtctcacggcttccattctg
aatggaaagtgtgacccatcagaactggagcagaagattcagaatctggaaagaatcctt
aagagcaatgctgagactgctactgatcttgtggtcctggacagatacgcctctcagcca
agagaagtggtgttggactgcggttcctacgtggacaagagtggcctctcctcccgtttg
caggctgaactcaatgaagctcttcacttcctgaatgactgcaacatatctgtggtcaag
gaggaccgtgatcccacattcatctccaaacaggtcctcaatgactgccgggccgtactg
caggtgctggggccctggtgtgcagataaggcagcaggcatcatggtgcgcgagctacag
aagtacatcaaacacgagcaggaggaactcagccgcaaatttctactcttcacggacact
attctgcgcaaagtgcacgctctctgtgaggagcatttctcccccgcctgcctggacctc
aagtttgtcacgccaaaggtcctacggctgcttgagatcctgcacgaatacaagccgttt
gagcggcagcagtttgaaagtgtggagtggtacaacaaccgcaaccaggacaactatgtg
tcctggagcgactctgaggatgaagatgaggatgaagaggtggaagccaaagagaggcct
gaagctaactttccctctccattcacaaatatcctgtgtggaatcatctttgtggagagg
cgttatacagctgttgtcctcaatcgtcttatcaaggaggcagggaagcaggacccagag
cttgcttatataagtagcaacttcatcactggccacagcattggcaagaaccaggcacgc
aacaaacaaatggaggtggagttcaggaagcaagaggaggttcttcgcaaattccgggct
catgaaactaaccttctgattgccaccagcatcgtcgaggaaggcgtagatattccaaag
tgtaacttggtggtgcggtttgacttgcctacagagtacaggtcctacgtccagtccaaa
ggccgagctcgggcacctgtctccaactacatcatgctggctgacactgggaggaccaaa
gcctttgaagaagatctcagtacctacaaggccatagaaaaaatcttaaggaataagtgc
tccaagtcagtggaggtgagtgagtttgaagtggaacaggtgatggatgatgacaacatt
ctaccaccctatgtcctgcggtctgaggatggaggtcctcgagtcaccatcaacacggcc
atcggtcacattaacaggtattgtgctcggctgcccagcgacccattcacacacctagca
ccaaaatgtaaaaccgtggagatgggggatggatgtttccagtccactctctacttgcct
ataaactcccctctgcgagttcctgtcaagggtccagtgatgaattgtgcaagagtggca
gagaaggcagttgcactagtatgctgtgagaaactccacaaaataggtgaactggatgat
cacctgatgcccgtgggaaaggagacggtaaaatacgaggaggagcttgatcttcacgat
gaggaggagaccagtgtcccaggccggcctggttctacgaagagaaggcagtgctacccc
aaagctataccggagtgtctgtgtgactgttatgcagtaccggagcagagctactacctg
tatgtgattgggatggtgctcaccactcccctccctgatgagctcaatttccgtagaaga
aagctctacccgccagaggacaccaccaggtgcttcggcatactgactgccaaacccata
cctcgaattccccatttcccggtgtacactcgctctggtgaggtgaccatctccatcgag
ttgcagaagtctggcttcacgctcaccactgcccagctcgacctcatcactcgtctccac
cagtacattttctcccatattctccgcctggagaaacctgcactggagttcatgcccaca
atggctgactctgcttactgtgttctacctctgaatgttgttggagactccaacacacta
gatatggattttaagtttatggaaggcattgagaagtctgaggcccgcactggcattcct
actactcagtacacaaagcagaaccccttcacctttaagctggaggactaccaggatgct
gtcatcattccaaggtatcgcaacttcgaccagcctcatcgcttctatgtcgctgatgtg
tacgcagacctgacaccactcagcaagtttccttcgccagagtatgagactttcgctgag
tactacaaaacaaagtacaacctggacttgtcaaaccttaaccagccgctcctggatgta
gaccacacctcctccagactgaacctgttaacccctcgacacctaaaccagaagggcaaa
gccctgccactcagcagtgcagagaagaggaaggccaagtgggagagtttacagaacaaa
cagatcctggtcccagaactgtgtgccatccaccctattccagcctccctgtggagaaaa
gcagtgtgtctgcccagcattctttaccgcctacactgcctgttgactgctgaggagctc
agagctcagacagctagtgaggccggagtgggagtccagaccctcccccctgacttcaga
tatccaaacctggacttcggctggaaaaggtctattgacagcaaaaccttcatatcctgc
cctgagtcctgcagcgaggaaggtgccagtcactgtaagcaccaagagactataagccct
gatcccagttccctaatgcttcccagtggtgagcactcttccatgtctgagcaggaggac
ttcaaagctttagattctgaagaagccccctgcaccaggaacctaactaatggcactgcc
ttctttgctagctgtgacgatggcaaccaaaatgagcaccttccccaatgtgacaattgc
caatgctcccagctcagctttgctgggctgcagagctccaaatcagtacaaagcactacc
tcagttcttgtgcagccccctcacaccttgaagaagcccaactccagtcctccacagcct
agtgatgaatgtacatcggggaggacttcagaccacacaaaaaaagctacctcagtctgc
agccgagcagccacgagtcccaacactctcacagcaccttctgatgtctgtgctcgtccc
cagcatggatcccacgcagcaaactcacccaagagcttggggcccaaccccggtctcatc
ctgcaggccctgaccttgtctaatgccagcgacggcttcaacctggagcggctggagatg
ctcggtgactctttcctgaagcatgccatcactacatacctgttctgtacctaccctgat
gctcacgaaggacgtctcagctacatgcgcagcaagaaggtgagcaactgtaacctgtac
cgtctgggaaagaagaaagggcttcctagcagaatggtggtgtccatcttcgaccctcca
gttaactggctgcctcctggatatgtggtcaaccaggacaagagcagcaccgacagaatg
aattcagaggaggccaaagaggagcttttggctaacgggcgatctggacacgaatatgat
gaggatgatgacgagggcgaggatgtagatgaagatggcgagttgatgctgaaagatgag
ccaaaagatgaagtgaacatggaggatgatcttgagtattacaaggagcacatccgcttc
attgacaacatgttgctgggatctggagcatttgggaagaagatctcgttgagtggcttc
cctcccaatcttactccagcttcaggctcctcaccagctatggaatctccgtatgattgg
aagacccccaagaagccctcccatccaaccgcagctcattaccccacagagcaggtgccc
agtgggccctcacctgaggagtttgactacagctcgtgggatgcaatgtgctacctggac
cccagcaaggccggtgaggaggatgactttgtggtaggcttttggaatccatcggaagag
aactgtggcactgagctcggtaagcagtccatatcctacgacctgcatacagagcagtgc
atcgcagacaagagcatcgctgactgtgtcgaggctctgctaggttgctacctgaccagc
tgtggagagagagctgcacaaatgttcctgtgttcactgggcctcaaggttttaccattg
gagagaggtccaccgactggagcagcggcacaggttcacactcatactcaagtcgcagac
ctgtgttacggctggctcaagatcccaccccgctgcatgctggaccatccagatgcagaa
cgaactctcaaccacctcatatctggctttgagaactttgaaaaaaagatcaactacact
tttaagaacaaggcttatctcctgcaagccttcactcacgcttcctaccattataacacc
attacagattgttaccagcggctggagtttcttggcgatgcaattctagactacctcata
acaaagcacctttacgaagacccacggcagcactctcctggagtactgaccgacctgcgc
tcagcgctcgtcaacaacaccatctttgcctctctggctgttaaatacgattatcacaag
tacttcaaggccatctcgccagagcttttccacgtcattgatgactttgtgcagtttcag
ctggagaagaatgaaatgcaaggcatggactctgagctgcgacgctccgaagaagacgaa
gagaaggaggaggacattgaagtccctaaggccatgggagatatctttgagtcgctagct
ggagcaatttacatggacagcaggatgtcattggagactgtgtggcaagtgtattatcca
atgatgaggccacttatagagaaattctctgccaatgtgccacgctctcctgtgagagag
ctgctcgagatggaaccagaaactgcaaagttcagccctgcagaaagaacgtatgatggg
aaagtccgcgtgacggtggaggtcgtcggaaagggcaagtttaaaggtgttggccgcagc
taccggattgccaagtcggcagcggcgcgacgagctctgcgcagcctcaaagccaatcaa
cctcaggtccaaaacaattga
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integrated database retrieval system
