Maylandia zebra (zebra mbuna): 101472731
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Entry
101472731 CDS
T02814
Symbol
lsm5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03018
RNA degradation
mze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101472731 (lsm5)
09123 Folding, sorting and degradation
03018 RNA degradation
101472731 (lsm5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101472731 (lsm5)
03041 Spliceosome [BR:
mze03041
]
101472731 (lsm5)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101472731 (lsm5)
mRNA degradation factors
5'-3' decay
Lsm complex
101472731 (lsm5)
Spliceosome [BR:
mze03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
101472731 (lsm5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
101472731
NCBI-ProteinID:
XP_004551849
UniProt:
A0A3P9CVW9
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Position
LG9:15446222..15448420
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AA seq
88 aa
AA seq
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MSATNPSQLLPLELVDKCIGSRIHIVMKTDKEIVGTLLGFDDFVNMVLEDVTEFEITPEG
RRITKLDQILLNGNNITMLIPGGEGPEV
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctacaaacccgtcgcagctgctcccgctcgagcttgtggacaaatgtatcggc
tcccgaattcacatcgtcatgaaaactgacaaagaaattgtcggcaccttgctgggcttc
gatgacttcgtcaacatggtcctggaggatgtgacagaatttgaaataacaccagagggg
aggaggataaccaagctcgaccagatcctcctcaatggcaataacatcaccatgctcatc
cctggtggagaaggaccagaagtataa
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integrated database retrieval system
