Maylandia zebra (zebra mbuna): 101472932
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Entry
101472932 CDS
T02814
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101472932
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101472932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
101472932
NCBI-ProteinID:
XP_024655309
LinkDB
All DBs
Position
LG3:34898109..34926302
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AA seq
1794 aa
AA seq
DB search
MMESLKTRLQFPSPVIQAQTVRSLVAAVLKEKGSDGQITWSCAQGPALEALWQQCCSDCA
VVCSACCDTLVLLVDQGHADLDYILNGVLNLLPSARHTQGLIKVIRRLLEMQADQSDGLF
TCPYSIRSSPHPYVTALENREDCWPALLFEIDDFIQKAVDRDKEAYITMLAPFLRYLYCQ
PHRQPEHALLRQSLLRVLLPIQGGSRSAPQNEEQETLSPVSDRLLLCLCQLVPHMQVDSV
EAVLELCAFVGALLQDLTGSSGDQWKPEKAALALQLLCACRRCLEFNGDCRPIIGLIQQL
VPACQELLLDELVMGVALLLLEAPSDQLTSLLRLALSLVPEQEEASPWLSPVLILPVLQL
LSCLGLTEPLSDQNTHSTNHRLAHSLLHRVSRPADKPQQPAPSLPLSLSSWYSELSVSLS
VLRKVANNPAAATDWLLAVSSALSSSQRLSSSLVLIVTYLIIMGQENICQLALKASQAVA
AADPCQVPPFVLLLLFKLTKEKNPVLAHAVLTSLPNLGTHKLCFPIVLHSLHMLAGSPKL
RAVGLRLMTALWKKQDRVYPELQRLMSQQDSRVVLGRDAQWEQILARAACVRDICRERPY
QHAGDMVAAISLTLKQCNRPDLVTPAALVLQGLQELCRAEVVDIISAWRTVWPELSCHSQ
PEMVQAIAELLALVPQLTVKSEQYEKLKEEVVSILWTYALSEDPEVSSCGYRALADFPET
DHTINHLPEAARPPAKLPENEEDEQSKEKEEDEKDLSVPGSSYVKLMTLTTSSVLPAFEL
FLTSLVRQEMSQMPRGIYFSALRGGNLRSDRGKTVAGIPSFMLKTYEKNKQPGLKPGLAA
GLLLSYSLSVQTDRAGRPISRFLVSRSRSYQQTLTALVHEVNIQPSEWHRALLLPQAWRG
FMSRAFYAVMEGRRAELEMLQKQGKEDPQELQYKHHCAWLWARDQLADVIKAATKDSPVV
QGNAILALSGLAAVLAKYESNLPTDGDGSLGAGPEFVATGSWLTMVLDTLLSISSSSFKA
TGRVFPWFLHRSYSGENTASTIARSCASLALSLLVSVLVVWQRDSLTHILSALRAGLPGS
PAADDSQAIQFHSGLGLGMVLSTLLHQRLSDESAQKDADLLFGPLDALEGSSFNPNLEYN
TGCILGLGLVLSAFCSSGQRSRHVRVSLTLDKLLANLQDCSGRGRMEQEVLAYSVACVSV
SAFSAGLIDAAKAEEVMDTLRSLTEESQQTPGFSWLWDGKAEHIHPHLLAAWIKILLAEG
CPTMQRLAAVNGLVALVGSESYLIQLKSETELVSKQHNRLNEVIRAVTQIVTFSGAIGLQ
SNSACLLGHLHLAHICSSHSHTAVPPDFSYLSEKSVVRSTTEFIAEAGHKGPQASHPGLV
KTALTALASVGASFQYPPINWSAALSPLMRMSFGEDVQHQCVVLAACQTQSSHSAALFLG
SWLSPPLVHSLSYQTRAHLYETLGSWMKHVTEDKLQVYVESLGLQQFQEDLRPQRASLCG
SVLRGLAQAMALPNPSSSCWTILCSATEKIFTFLPDRIQDNEVDLYVGVAKCLSEMSDTE
IERIMKVSETQMEKTCFILAYLTSQGRVPLLSLNDVIAGVLRGWPSRRVGWLLLQTFYQC
RLATSINTGISRRMEWLLQLMGHIRNVAYGVTDVQCGDTRSATDFLFQLFAAAVVSWGDH
IMPLLFGIRVQWFPWQPAPKPQALTHGLYGEESSVDGALSQCLLAMSHSLPRLLDKEPWS
SQTPKFIDWLLSIMEAPEQSVSASTVSTAKAALLALKSSAEFKKKAVWTRAYGW
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgatggagagtttaaagacgcggctccagttccccagccccgtcatacaagcccagacg
gtgagaagtcttgttgcagctgtcttaaaggaaaaagggtcagatgggcagatcacctgg
tcctgtgctcagggcccagcactggaagctttgtggcagcagtgctgcagtgactgtgct
gtggtgtgttcagcgtgctgtgacaccttggtgttattggtggaccagggccatgcagac
ctggactacatcctcaatggtgtcctcaacctcctgccttctgcaagacacactcaaggg
ttgataaaagtcattcggcgattgttggagatgcaggctgaccagagcgatggactcttc
acctgtccgtattctatcaggagcagccctcacccgtacgtcacagccctggagaacaga
gaggactgctggccggctctgctgttcgagatcgatgactttatccagaaagctgttgac
agagataaagaggcttatatcaccatgctggcccccttccttcggtacctatactgccaa
ccgcacaggcaacccgagcacgcgctccttcgacagagtcttcttagggtgctgctgccc
attcagggaggatccaggtccgccccccagaacgaggagcaggaaacgctgtccccagtg
tctgacaggctgctgctctgtctttgtcagctggttccacacatgcaggtggacagcgtg
gaggcagtcctggagctgtgtgcatttgtgggcgctctgctccaagatctaactgggagc
tctggagaccagtggaaaccagagaaagcggcgctggctctgcagctgctgtgtgcatgt
cggcgatgcctcgagttcaacggagactgcagaccaataatcggcttaatacagcagctg
gttccagcctgtcaggagttgctgttggatgagctggtgatgggcgtggccttgctcttg
ttggaagccccttcagatcagctgaccagccttctcagacttgcactgagtttggtccct
gaacaagaggaggcgtcgccctggttgagtccggtcctgattctccccgtgttgcagctc
ctgtcctgcttgggtctcactgagccgctgtctgaccagaacacacacagcaccaaccac
aggctggctcacagcctgctgcacagagttagcaggcccgcggataaaccccagcagcct
gccccatcactgcctctgtctctgagttcctggtatagtgagctcagcgtgtctttgtcg
gtactgcgcaaagtggccaacaatccagcagcagcgaccgattggctgttggcggtcagc
tccgccctgtcgtccagccagcgcctgtcctcctctcttgtcctgattgtgacttatctc
atcatcatgggtcaggaaaacatctgccagctggctttgaaagcaagccaggctgtcgct
gctgccgacccctgccaggtcccgcccttcgtgctgcttcttttgttcaaactgactaaa
gaaaagaatcccgtcctggctcacgctgttctcacaagcctgccaaacctcggcactcat
aagctgtgcttcccgatcgtgctgcacagtctgcacatgctggccggctcccccaagctg
agagcagtgggactgcgcctcatgaccgctctgtggaaaaaacaggaccgggtctaccca
gagctgcagcgtctaatgagccagcaggacagcagggtggtgctggggagggacgcccag
tgggagcagatcctggccagggccgcctgtgtcagggacatctgcagagagaggccttac
cagcatgcaggggacatggtggctgccatttcactcactttaaaacagtgcaacagacca
gacctggtaaccccggctgctctcgtcctgcagggactacaggagctgtgtcgagcagag
gtggtggatattatctcagcatggagaactgtttggcctgagctcagctgtcactcacag
ccagagatggttcaagccatcgctgagcttttggctctggtgcctcagctcacagttaaa
tcagagcagtacgagaaattaaaagaagaggtggtcagcattctgtggacttatgctctg
agcgaggatccagaggtgtccagctgtggctacagggctttggcagactttcctgaaaca
gaccacaccataaaccaccttcctgaggcagcccgaccacctgcaaagctgcctgaaaac
gaagaagatgaacagagtaaagaaaaggaggaagatgagaaggatctctccgtcccaggc
tcatcttatgtgaagctgatgactctcaccacctcgtctgttcttccagccttcgagctc
ttcctgacgtcactggtgaggcaggagatgagtcagatgccacggggaatctacttctca
gccctgagggggggtaacctccgctcagaccggggtaaaacggtggcaggaatcccgtcg
ttcatgctcaagacctacgagaaaaacaagcagcctgggctgaagccaggactagcagct
gggctgctcctgtcgtacagtttgtctgtgcagaccgatcgtgctgggagacccatcagc
cgcttcctggtcagccgcagccgcagctaccagcagacgctgacagccctcgttcatgaa
gtcaacatccagccctctgagtggcaccgtgccctcctgctgccacaggcctggaggggc
ttcatgagccgagctttctacgccgttatggagggtcgacgtgctgagttagagatgctc
cagaaacaaggcaaagaggatccacaggagctgcagtacaagcatcactgtgcctggctg
tgggccagagatcagctggcagatgtcatcaaagctgctacaaaggacagtcctgttgtt
cagggaaacgccatcttggctctgagcggcctcgctgctgttctcgccaagtatgagagc
aacctgcccactgatggtgacggcagcctgggggctggaccagagtttgtggccacagga
agctggttgaccatggtgctggacaccctgctcagcatcagcagcagcagcttcaaggcc
acaggacgagttttcccctggtttctacaccgctcctactcgggtgagaacacagcgagc
accatagcgcgctcctgtgcaagcctcgccctgtcgctgctcgtctccgtgctcgtggtg
tggcagcgggacagtctgacccacatcctgtcggcactgcgggccggcctcccgggctcc
cccgccgcagacgactcccaggccatccagttccactctgggctcggtctgggcatggtg
ctgtccaccctgctgcaccagcgcctcagtgatgagtctgctcagaaggatgctgatctc
ctcttcggccctctggatgctctggaaggttcctctttcaaccccaacctggaatacaac
actggctgcatactgggtctggggctagtgctgtctgccttctgcagcagtggacagagg
agtcgacatgtccgtgtcagcctaacgctcgacaagctgctggccaacctgcaggactgc
agtgggcggggacgcatggagcaggaggtcttggcgtactctgtggcgtgtgtgagcgtt
tcagcgttcagcgcaggtcttattgacgctgccaaggcggaggaggtgatggacacgctg
cgcagcctgactgaggagagccagcagaccccgggcttctcctggctctgggatggcaaa
gcagagcacatccaccctcacctgctcgcagcctggatcaaaatcttactggctgagggc
tgtcccaccatgcagcggctggctgctgtcaatgggctggtggctttggtggggtcagag
agttacctcattcagctgaagagtgagacggagctcgtgtccaagcagcacaacaggctg
aatgaagttattcgggccgtcacacagatcgtcacgttctctggagccatcggtttgcag
tccaacagcgcctgcttgctgggacatttgcatctggcccacatctgcagcagtcacagt
cacacagcagttcctccagatttcagttacctctcagagaaaagtgtcgtcagatccacg
acggagttcatcgcagaagctggacacaaaggtcctcaggcctcccatccaggcctggtt
aagaccgctctcaccgctttggcgtcagtcggcgcctctttccagtatccgcccatcaac
tggagcgccgctctgtctcctttaatgaggatgagctttggagaggatgtgcagcaccag
tgtgttgtactggcagcctgtcagacccagtcctcccacagcgctgctctctttttgggc
tcctggttgtcccctcccctggtccacagtctcagctaccagacccgggcccacctctat
gagactctgggctcgtggatgaagcacgtgactgaggacaagctccaggtgtatgtggag
agtttggggctgcagcagtttcaggaggacctccgaccccagcgcgcgtccctgtgtggc
tctgtgctgcggggcctggctcaggccatggccctcccaaacccctctagcagctgctgg
accatcctctgctctgccacggagaagatcttcaccttcctgcccgaccgaatccaggat
aatgaagtggatctgtatgtgggcgtggccaagtgtctgtctgagatgtctgacacagag
attgagaggatcatgaaagtctctgagactcagatggagaagacctgcttcatcttagcc
tacctgacctctcagggacgagtgcccctccttagtcttaatgatgtcattgctggggtc
ctccgtggttggccaagccgcagagtggggtggctcctcctgcagacgttttaccagtgt
cgcctggcaaccagcatcaacacaggcatctccagacggatggagtggctcctgcagctg
atgggacatatccgaaatgttgcctacggcgtaacagacgtccagtgtggagacaccaga
tcggccaccgacttcctgttccagctctttgctgctgcagtagtttcctggggtgaccac
atcatgccactcctctttggcatccgggtccagtggtttccatggcagccagcccccaag
cctcaggctctaacacacggtctatatggcgaggagtcgtcggtggacggcgccctgtcc
cagtgcctgttagcgatgtcccacagcctccctcggctcctggacaaggagccctggagc
agccaaacacccaagttcatagactggctgctcagcatcatggaagctcctgagcagagc
gtgtcagcatcaacggtcagcacagccaaagctgctctgttggcgctcaagtcctctgca
gagttcaagaagaaagccgtgtggaccagagcgtacggctggtag
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integrated database retrieval system
