Maylandia zebra (zebra mbuna): 101473192
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Entry
101473192 CDS
T02814
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
101473192 (tmc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mze02000
]
101473192 (tmc1)
03037 Cilium and associated proteins [BR:
mze03037
]
101473192 (tmc1)
Transporters [BR:
mze02000
]
Other transporters
Pores ion channels [TC:
1
]
101473192 (tmc1)
Cilium and associated proteins [BR:
mze03037
]
Other cilia and associated proteins
Stereociliary proteins
101473192 (tmc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
COX16
Na_K-ATPase
UPF0542
Motif
Other DBs
NCBI-GeneID:
101473192
NCBI-ProteinID:
XP_024660195
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All DBs
Position
LG12:complement(14593716..14608526)
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AA seq
951 aa
AA seq
DB search
MPRDSLITSENDSEQDADLSLQEEHESKTHRTKRRDGDRQKKKRRNERRKGGTRAGEGEE
DLQAISEKRERSKRKRAKSKQETSRRENNEEEEAQLTGGKGTKARKDIRNEKTRRMEKEE
VREVDENVDKGKKKQGSTKKGEKKEDGGKQLVKEKARDIKKKKHKKAETSSEPETSEEDD
DEEEDNDKDVVRPECLSPEELEKLKEAVDERKKLIQSLRGKPWPMKKKLVTLRESQEFVE
KYEGALGKGKGRKLYAYKVLMTKKWMKFQRDFENFKTACIPWEMKIKEIESHFGSSVASY
FIFLRWMYGINMILFGLTFGLVMVPEALMGRPYGSMPRKTVPRAEEASAMDFAVLWDFGG
YAQYSVLFYGYYNNQRTVGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNANESGVGDD
NSFNFSWKMFTSWDYLIGNAETADNKFASITTSFKEAILEEQESHKDDNIHLTRFLRVLA
NFLVLCCLAGSGYLIYFVVRRSQKFALDGLENHTWWERNEVNMVMSLLGMFCPMLFDVIS
TLENYHPRVALQWQLGRIFALFLGNLYTFIIALMDEINLKRKEEKVVKFNITMWEASLYN
GTVLENSTAPPVTIHPADVPRGPCWETMVGQEFVRLIISDTMTTYITLLIGDFLRAVLVR
FLNYCWCWDLEAGFPSYSEFDVSGNVLGLIFNQGMIWMGSFYAPCLPALNVIRLHVSMYL
QCWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVSIPPSFDCGPFSGKN
RMFDVIHETLESDFPPWFSKVFSYASNPGLVLPFILLMVLAIYYLQSTSKSYREANVELK
KKLQMQNEENKRKNKRAALKAQMDLEEARKTAQEQQRNNNASVQDQEDDTDIHVSGQNPP
PVGGRGSQMPSSRDSGSRTHDRGNHGPSGYLPGFARQTEPRMYRVPSLQRH
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgggacagtctgatcacctctgagaatgacagtgaacaagatgcagatttgtcc
ttgcaagaggaacatgagagtaaaacacacagaacaaaaagaagagatggtgacaggcag
aaaaagaagaggagaaatgagagaagaaaaggaggaacaagagcgggagaaggggaagag
gatttacaggccatatctgagaaaagagaaagaagcaagcgaaaaagagctaagagtaaa
caagaaacaagcagaagagagaacaacgaagaggaagaagctcaactgacaggtggcaag
ggaacaaaagcaagaaaggatatcagaaatgaaaaaacacgcagaatggagaaggaggaa
gtgcgagaagttgatgaaaatgttgataagggaaaaaagaaacagggaagtaccaaaaag
ggagagaagaaagaagatggaggtaaacagctggtaaaggaaaaagcccgggacataaaa
aaaaaaaagcacaagaaggctgaaacaagttcagagccagagacaagcgaagaggatgat
gatgaagaagaggacaatgacaaggatgtggtgaggccggagtgtctctctccagaggag
ctggagaagctgaaggaggcagtggatgagaggaagaaactgatccaaagtctaagggga
aaaccctggccaatgaaaaagaaacttgtcactttaagggagtctcaggagtttgtggaa
aaatatgaaggtgccttgggaaagggaaaaggcaggaagctctatgcatacaaagtcctg
atgaccaagaaatggatgaaattccaacgggactttgaaaacttcaaaactgcatgcatc
ccatgggagatgaaaataaaggagattgaaagtcattttggctcctcagttgcctcatac
tttatctttctgaggtggatgtatggcatcaatatgatcttgtttggtctgacctttggc
ctggttatggtaccggaggcattaatggggcgaccttatgggagcatgccaagaaagact
gtccccagagctgaggaggccagtgcgatggactttgctgttctttgggactttgggggt
tacgcacagtactcagtcctcttctatggctactacaacaatcaacgtacggtgggctgg
ctcaagtttcgcatgcctctgtcttacttcctggttggtgtcggtacagtggcctatagc
tacatggtggtcatcagaacgatggcacgtaatgcaaatgaatcaggggtcggcgatgat
aacagcttcaatttcagctggaaaatgttcaccagctgggactacctgataggaaatgct
gaaacagcagacaataagtttgcttccatcaccaccagcttcaaggaggcaatcttagag
gagcaagagagccacaaggatgacaacatccatctgactcgattcttgcgtgtgctggcc
aacttcctggtcttgtgctgcttagcaggaagtggatacctcatctactttgtagtgcgg
cgttctcagaaatttgccttagatggactggagaatcacacgtggtgggaaaggaatgag
gtgaacatggtcatgtcattactggggatgttctgtccgatgctgtttgatgtaatcagc
accctggagaactaccacccgcgggttgccctgcagtggcagctcggtcgcatctttgcc
ctcttcttgggaaatctctacaccttcattattgcactcatggatgagatcaaccttaaa
aggaaagaggaaaaggtagtgaagtttaatataaccatgtgggaggccagtctttacaat
ggcaccgttttagaaaacagtactgctccacccgtcacaatccaccctgctgatgtgccc
agagggccttgctgggagacaatggtaggccaggagtttgttcgcttgatcatatctgac
acaatgacaacttacatcacactgctgattggtgatttcctgagagcagttcttgttcgt
tttctcaactactgctggtgttgggacctagaggctggctttccatcctactctgagttt
gacgtcagtgggaacgttttgggcctgatcttcaatcaaggaatgatatggatgggttcc
ttctatgcgccctgtctgcctgccttaaacgtcatccggctccatgtctccatgtacctg
cagtgctgggctgttatgtgctgtaatgtgccacaagaaagggtcttcaaagcctctggt
tccaacaacttctacatggccatgttgctggtcatcctctttctgtccacactgcctgcc
atctacaccattgtctccattcccccttcatttgactgtggacctttcagtggtaagaac
cgcatgtttgatgtgatccacgagactctggagtctgactttcctccatggtttagcaaa
gttttcagctatgcctctaaccctggattggtgctacccttcatacttcttatggtactg
gccatttattacttgcaatctacatccaaaagctacagagaagcaaatgtggagctgaag
aaaaagctacaaatgcaaaatgaggagaacaagaggaagaacaaacgagcagcactgaaa
gctcaaatggatttggaggaggccagaaagactgcacaagagcaacaaaggaacaacaat
gcttcagtacaggatcaagaagatgatacagatatccacgtcagcggtcagaaccctcct
cctgttggcggcagaggaagccagatgccgtccagcagagactcaggctcaaggacccac
gaccgtggcaaccacgggccttctggatacctgcctggttttgctcggcaaactgagccc
aggatgtacagggtgccgagcctgcagagacactga
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integrated database retrieval system
