Maylandia zebra (zebra mbuna): 101473804
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Entry
101473804 CDS
T02814
Name
(RefSeq) lymphocyte-specific protein 1 isoform X2
KO
K12327
caldesmon
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
101473804
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mze04812
]
101473804
Cytoskeleton proteins [BR:
mze04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
101473804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
101473804
NCBI-ProteinID:
XP_004573364
LinkDB
All DBs
Position
LG1:33402806..33475759
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AA seq
549 aa
AA seq
DB search
MSDSIRRRSSSRQLLQNLIRVTAQRSQEDAEEIERERRRRAREKQRGEKSPSWLEPTQQN
HYTQNTESDEELKPSCSVGLDEDEGFSDWSHRLETRNEQEMQNGCRAKEQRPSASPPNPQ
SDQHQVDEEGQEEAGGLEPRSRTQDTSTEAPVKTSNDKKEVRTSYSSSVFLAHDTRLQHT
TCRPADMTSYLAAGTMKPRYAPYSLEEACRVKGEVEVQKEQEEKNENNKHEQEREEEEVQ
PTLQKERRPTESRQTPRDDEQEEEVDFTHEVKEDLHHIRVWRHRDDKNEAREDNEEERTL
QNKRLTDSRDQWSELENRSSAISLCNSSEGEESLNCYGPMSPTFKDEVSSRITADGKFKI
TERTESLRRSTSNIKKTLPPLPVSKIDKRLEQYTHALELSSKEGRSGCQTVTDLTAPTEP
VASKKNLFEAGDAWNQNATSITASKDADALKVGVADLINQWVKGSEDGSRSSSPSKPAEI
NPGGVLNKKNLWESLGDTLSSGKEGKESSTGKRYKFVVTGHGKYEKVSVDSGCSEDINCQ
SVGHFYEDL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactccatcagaagaagaagctccagcaggcagcttctgcagaacctcatcagg
gtgacagcacagcggagccaggaggatgctgaagagattgagcgggagagaaggagaagg
gccagggaaaagcagagaggagagaagagcccgtcctggctcgagcccacccaacagaac
cactacacacaaaacacagagtcagatgaggagctgaagcccagttgctccgtgggcctg
gatgaagatgaaggtttcagtgactggagccacaggctagaaacccgtaatgagcaagag
atgcagaatggctgcagggcaaaggagcagagaccttcagcatcaccaccaaaccctcag
agtgaccaacatcaggtggatgaagagggacaggaggaggcaggaggactagaaccaagg
agtaggacccaggacacttcaacagaagctccagtgaagacctcgaatgacaaaaaggaa
gtcaggacatcttacagctcatcggtcttcttggcacacgacacaaggttgcagcacaca
acctgccggccagcagatatgacatcgtatttggcagcaggaacaatgaagccacgatat
gctccctactcacttgaagaagcctgcagggtgaagggggaggtggaggtgcaaaaggaa
caggaggagaagaatgagaataacaagcatgagcaggagagagaagaagaagaggtgcag
ccaactctgcagaaagagaggaggccgacagaaagcagacagactccaagagatgatgaa
caggaggaagaggtggacttcacacatgaagtgaaggaagacctccaccacataagggtg
tggcgacacagggatgacaagaatgaggcgagggaggacaatgaagaagaaagaacactg
caaaacaagcgactgacagacagcagagaccagtggagcgagctggaaaacagaagctct
gccatttctctctgcaacagcagtgaaggcgaagagtcattaaactgctacggtcccatg
agtccaacattcaaggatgaagtgagcagccgcatcacagcagatggtaaattcaagatc
acagagcgaacagagtctctgaggagaagcaccagcaacataaagaagacactgccacct
cttcctgtttccaagatcgacaagagactggaacaatatacacacgccctggagctctcc
tcaaaggaaggcagatcaggctgccagacagtgactgatctcactgctcccactgaacca
gttgcatccaagaagaacctgtttgaggccggagacgcctggaaccaaaatgccacctcg
atcacagcatctaaggacgcagatgctctaaaagtgggtgttgctgatctcatcaaccag
tgggtgaaaggaagtgaagacggaagcagatctagctccccctccaaaccagccgaaatc
aaccctggtggtgttttaaacaagaaaaatttatgggagagccttggagacacgttatcg
tctgggaaagaaggaaaggagagctccactggcaaaagatataaatttgtggtgacaggt
cacggcaagtatgagaaggtttctgttgacagcggatgcagtgaggacataaactgccag
tcagttggccacttctatgaagatttgtaa
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