Maylandia zebra (zebra mbuna): 101474749
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Entry
101474749 CDS
T02814
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101474749
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
101474749
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
101474749
NCBI-ProteinID:
XP_004548947
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All DBs
Position
LG22:complement(8799640..8811706)
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AA seq
644 aa
AA seq
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MNTDVLLCPAVQTWSKTLISEPHRHTHYHTSAWVSPSLLPLHDSCRPFCETMYPGELDPN
TDPQLLESKLDFFHKLGYSTAQVQAVQQKFGPNMDTDKVLGELVRIGPVQEANQGPVTTM
SVLVSRGETQPSGPTLLLPVAGTSPQSKEETGEEGKTLRPVVIDGSNVAMSHGNKEVFSC
LGIQLAVNFFLDRGHTEITVFVPSWRKEQPRPDVPITDQQILRELERKRILVFTPSRRYA
GKRVVCNDDCYIVKHAFESDGIIVSNDMYRDLQGEKPEWKRFIEERLLMYSFVNNKFMPP
DDPLGRHGPTLENFLRRVPKTQKKQPCPYGKKCTYGIKCKFHHPERAKQSNRALADELRE
SAKQPTPSQKQSSACSSPVPGLSLLLVEDMAKKLTLGNESSSLKKAHKNEKVAQVKASHC
SSKKASSKKEKSSKHASSDHNSVQHSRSQEQLDSGLGSIDSQPVEAPWSLSDHQFGLPYS
SSQQYCPPKSSPCSCCSHGTASCGSAPAFPTHNIGPVSSHSADMMPYSLPHYPNYCAYPL
SMNPYSQLTNFQRSQTHSFQRPQWSDPFCGQPAVVRSLPGDPSHWEPPPMKQPGPSREER
EVIRKKLLAIFSAQLVDTAMDMFPQMMDPQMLVVEILKLQSQLR
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgatgttttactctgcccagctgtgcagacgtggagtaaaaccctcatttca
gagccacaccgccacacacactaccacacatctgcatgggtctctccttcactgctccca
cttcacgactcttgccgtcctttctgtgagaccatgtacccaggtgaacttgacccgaac
acggacccgcagctcttggagtccaagttggacttcttccacaagctgggctactccacg
gctcaggtacaggctgttcagcagaagttcggccccaacatggacacggataaagtgctg
ggggagctggttcggatcgggcctgttcaggaggccaatcaggggccggtgaccacaatg
tcggtgctggtgtccagaggagaaacccagccatcgggccctacactgctgctgcctgta
gctggtacttctcctcagagcaaagaggagactggcgaggaaggaaagactttgagaccc
gtcgttatagacggcagcaatgtggccatgagccatggcaacaaggaagttttctcttgt
ctgggaatccagttggctgtgaacttcttcctggacagaggccacactgaaatcactgtg
tttgttccctcatggaggaaggagcagcccaggccggatgttcccatcacagatcagcaa
attctgcgtgagctggagaggaaaaggattctggtgttcacaccgtcgcggcgctatgca
ggcaaacgggtggtctgtaatgacgactgctacattgtcaagcacgccttcgagtctgac
ggcatcatcgtgtccaacgacatgtaccgtgaccttcagggagagaagccggagtggaag
cgcttcatcgaagagaggctgctcatgtactcctttgttaataacaagtttatgcccccc
gatgatcccctcggtcgacatggaccaaccctggagaacttcctgcggagggttccaaag
actcagaaaaaacagccgtgtccttatgggaagaaatgtacttatggaatcaaatgtaaa
ttccaccatcccgagcgagccaaacagtccaatcgtgctcttgcagacgagcttcgagag
agtgctaagcagcctactccttctcagaaacaatcttcagcttgctccagtcctgtgcct
ggactcagcctcctgttggtggaggatatggcgaagaaactgactctgggaaacgagagc
agctccttaaaaaaagctcataaaaatgaaaaggtagctcaggtgaaggcaagtcactgc
tccagcaagaaggcctcatcaaagaaggagaagtccagcaaacacgcgtcgtctgatcac
aactcggtgcagcacagccgctctcaggagcagctggactctggtttaggctccatagac
agccagccggtggaagctccttggagtctgagtgatcaccagtttgggctaccgtacagc
agcagccagcagtactgccctccaaaaagttccccgtgcagctgctgctcacatggcact
gcctcttgtgggagtgcgccggctttcccaactcacaacatcgggccagtgagcagccac
agcgctgatatgatgccctacagtctgccccactatccgaactattgcgcttacccactt
agcatgaatccatacagccaactgacaaatttccagcgcagccaaacccacagcttccag
aggccacagtggtccgatccattctgcggtcaaccggcggtggtccgcagcctcccggga
gatccctcacactgggagcctcctccaatgaagcaaccaggtcccagcagggaggagaga
gaggttatacggaaaaagctcctcgctatcttcagcgcccagctggtggatacagccatg
gacatgttccctcagatgatggatccacagatgctcgtggtcgaaatcctcaagttgcag
agtcagctgagatga
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