Maylandia zebra (zebra mbuna): 101474977
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Entry
101474977 CDS
T02814
Symbol
col25a1
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X1
KO
K24356
collagen type XXV alpha
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mze00536
]
101474977 (col25a1)
Glycosaminoglycan binding proteins [BR:
mze00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101474977 (col25a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
101474977
NCBI-ProteinID:
XP_023009022
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Position
LG3:complement(26835013..26992993)
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AA seq
695 aa
AA seq
DB search
MENAVARGASKCMEKMEKELSPRQKRHYCRTTALNVFSSFCSVASVAFCIFLSISGADIK
NRVVDLESAKGEHTFTRAPGYSVEDFNSLIEERVDELLSQRSYENFVKIRTARQTSPECN
CPPGPPGKRGRRGRNGDPGPPGPPGPKGEKGDQGDQGPRGLPGLPTLAALHSNQILTVKG
DQGQAGPPGPPGPPGPPGPRGPPGDTGKDGPRGVPGLPGDPGQPGETGPLGPEGPQGSKG
SLGPPGIPGVDGLKGDVGIPGLDGVPGAKGEMGERGEKGDLGEDGPKGEPGEKGDAGSSA
AGIKGEPGEPGRSGLKGEPGLPGLPGLPGIKGEPGFLGPQGEPGLPGLPGTKGEKGDHGP
PGKGERGETGPTGPKGSQGEAGTPGPKGSKGEGGDKGDLGLIGPRGPPGQKGEQGATEII
DYNGNIQEALRKITTITVTGPPGPPGPTGPPGIKGDRGLPGLPGLDGERGYKGSKGDMGM
PGASGEKGTTGLPGLPGVNGMKGDKGDAGLPGPQGPSIIGPPGPPGPHGSSGPMGPHGFP
GPKGEPGLHGAKGTRGEPGHKGDRGPLGLPGASGLDGKPGIRGMDGPPGPAGPAGPKGDI
GEKGAPGEPGPRGPYGLPGAAGTPGLDGLPGLRGEKGDVGERGEKGEKGKKGKRGPKGEK
GEQGAPGLDAPCPLGPDGLPMPGCWQKGVTPWLVA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgcagtggcgagaggagcatctaagtgcatggaaaaaatggagaaagaactg
tcgccccggcagaagcgacactactgccgcacgactgcgctgaacgtcttctcctcgttt
tgctccgtggcgtccgtcgccttctgcattttcctgagcattagcggagctgacatcaag
aaccgagttgtggatttggagagtgccaaaggcgagcacaccttcacccgtgcccctggc
tactccgtggaggatttcaattcactgatagaggaaagagtggacgagctgctctctcag
cgctcctatgagaatttcgtcaagattcggacagccagacaaacatcacctgaatgcaac
tgccctccaggacctccgggaaagcggggaagaagaggccgtaatggagaccctggacct
cctggccctcctggtccaaagggtgaaaagggggatcaaggcgaccagggaccacgggga
ttgcctggtctccctacgctggctgctttgcacagcaatcagatcctgactgtcaaggga
gatcaggggcaagcagggccacccgggcccccggggccaccgggccctcctggaccgagg
gggcctccaggagacactggcaaggatgggcccagaggtgtgcctggtctaccgggtgat
ccaggacagcctggggaaacgggacccctgggacctgaggggccgcaaggatcgaagggt
tcactcgggcctcctggcatccccggtgttgatggactgaagggggatgttggcatccca
ggactggacggtgttccaggagccaagggtgaaatgggagaacgaggtgaaaagggtgat
ttgggtgaggacggaccgaaaggtgaaccgggagagaagggagatgcaggctcctctgca
gcaggcatcaagggtgaacctggagagcctggaagaagtggactaaagggagagccagga
cttccagggctgcctggactaccagggataaagggtgagcccgggtttctcggtccccag
ggtgagcctgggcttccaggactcccaggaactaagggtgagaaaggtgaccacggacca
ccagggaagggggaacgaggagagacgggacccactggaccaaagggttcacaaggagag
gctggtacacctggccctaaagggtcaaagggcgagggtggagataaaggagacttgggg
ctcattggaccaaggggcccacctgggcagaaaggagaacaaggtgccaccgaaatcatc
gactacaacggaaacattcaggaagctttacggaagattaccactattacagttacgggt
ccccctgggcctcctgggccaacgggaccaccaggcataaagggggatcgcggtctgcct
ggtcttcctggacttgatggagaaagaggatacaaaggctctaaaggagacatgggaatg
cccggagcttcaggggagaaaggaacaactggtttacctggcttacctggtgtcaatgga
atgaaaggggataaaggagatgcaggactcccaggtcctcaaggtccttctataattggc
cctccagggccaccagggccccatggatcctcaggacctatgggtccccatggctttcct
ggaccaaagggtgaacctggtttgcatggggcaaagggtactcgaggagaaccaggacac
aaaggggaccgtggacctctgggtctccctggagcctccggcttggacggcaagcctgga
attaggggcatggatgggcctccaggtcctgctggtccagctgggccgaagggggatatt
ggtgagaaaggagcaccaggtgagccagggccaagaggaccctatggactacctggagct
gctggaacaccaggcttggatgggttgccaggcttaaggggagaaaaaggcgacgttggg
gaaagaggagaaaagggggagaagggaaagaagggcaaaagagggcctaagggcgagaaa
ggagaacagggtgccccaggattagatgcaccctgcccattgggccctgatggtttacca
atgcctgggtgctggcagaagggagtcacgccatggctggtagcctga
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