Maylandia zebra (zebra mbuna): 101475161
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Entry
101475161 CDS
T02814
Name
(RefSeq) collagen alpha-2(VI) chain
KO
K06238
collagen type VI alpha
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04510
Focal adhesion
mze04512
ECM-receptor interaction
mze04518
Integrin signaling
mze04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101475161
04518 Integrin signaling
101475161
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101475161
09142 Cell motility
04820 Cytoskeleton in muscle cells
101475161
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mze04147
]
101475161
00536 Glycosaminoglycan binding proteins [BR:
mze00536
]
101475161
Exosome [BR:
mze04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101475161
Glycosaminoglycan binding proteins [BR:
mze00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101475161
Hyaluronan
Extracellular matrix or blood plasma proteins
101475161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
101475161
NCBI-ProteinID:
XP_024661129
LinkDB
All DBs
Position
LG16:complement(19223653..19240739)
Genome browser
AA seq
1013 aa
AA seq
DB search
MTMLSGFVFVLLVQTVNLQLTPRGPRPIPGRGDSPEPTVPPLLPEPTPRPEGCEAGIIDC
PIRVYFTIDTSETIALQEPPPGSLVESIREFTKIFAERLADEEYRGHIQITWSIGGLHFS
QKQVVFSQLTTRENFIRNLASIRYLGKGTYIDCALKNMTHQMTQHYTETKAVLFAVVITD
GYVTGNPCSGIKVMAEKARDQGIQIFSVAASKEIDEFGMREIANSPYELFRDDYIAVEIV
DGKPRLSTKTIDRIVKAMKYQAYLQCYKPRCFESPGRPGLRGPSGPKGTKGDRGPQGPKG
ERGRQGDPGIEGPIGRPGPKGEAGLKGDKGEIGLTGAKGVAGSTGKNGTDGQKGKIGRIG
APGCKGDPGDKGPDGYPGDAGETGLLGDKGEKGDTGLPGKPGPPGPKGNPGLKGERGNQG
NPGQPGQRGSPGERGPEGSRGRPGENGLKGAKVRRSRWDLGLPGPRGQPGELGAPGRNGT
TGDPGDSGPRGDIGPLGPKGDRGRQGFSYPGSRGPPGDRGAPGRRGPRGSRGDCGAKGES
GNKGQPGAPGEPGQSGPPGERGPRGERGPDGDPGPAGDSGLTECDVMSYIRETCGCCDCE
KHCGAMDIVFVIDSSESVGLTNFTLEKNFVINTINRLGSMAPEPTSTTGTRVGVVQYSHN
GTFESIRLDDPNINSMTAFKTAVKNLRWIAGGTFTPSALKYAYDNLIRDSKRARSKVSVV
VVTDGRFDPRDDDNQLTYLCNDPAVVVNAIGIGDMFDTRHDSETLVSIACNKKDRATEMR
RYSDLVADEFLEKMETVLCPDPVIKCPDLPCTSELDSAPCVARPVDLVFLLDGSERLGER
NFLLVREFVQKVADRLVLARTRTDRERARLALMEFGKESENRVAFSLTHDPVQIVNNLTA
LQYLDSSSSVAPGIIHAINNILVRGSARQTRPNAEISFVFITDGVTNSDNLDEAISAMRR
YEVVSTVIATGSDVDQEILTKLAMGDQHAIFKAEKFSDFLRSGMFDRFIQWVC
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgctttcagggtttgtctttgtattgctggtccaaactgtaaaccttcaactt
acacctcgaggacccagaccaataccggggcgaggtgacagtccagagccaacggtacct
ccactcttgcctgaacccacaccaagacctgaaggctgtgaagcaggtataatcgactgt
cccatcagggtgtacttcactattgacacctcagaaaccatcgcattgcaggagccccca
cctggcagcctggtggagagtatcagagaattcacaaagatctttgccgagaggctggct
gatgaggagtacaggggccatatccagatcacttggtccataggtgggctgcacttctcc
cagaagcaggtggtcttcagccagctcacaaccagagagaacttcatcaggaatctcgct
tcgatccgatacctgggcaaaggcacttacatcgactgtgccctcaaaaacatgactcac
cagatgacccaacattacacagagacgaaggcggttctcttcgctgtggtcatcactgat
ggctacgtgacaggaaatccatgttcagggatcaaggtgatggcggaaaaggcccgggat
caagggatccagattttctcagtagcagcgtccaaggagatcgatgaatttggaatgagg
gagatagcgaactctccgtatgagctgttccgtgacgactacatagcggtggaaatcgtt
gatgggaaaccaagactaagcactaaaaccattgatcgtatcgtaaaagcaatgaaatac
caagcatatttacagtgttacaaaccaagatgtttcgagagtcctgggcgccctggacta
agaggtccctcaggtccaaaaggcacaaaaggagacagaggccctcaagggccaaagggt
gaaagaggaagacagggtgatcctggcattgaaggtccaattggacgacctggtccaaag
ggagaggctggtttaaagggtgacaagggggaaattggattaactggagcaaagggtgtt
gccggttcgactggcaagaatggaactgatgggcaaaaggggaaaattggacgaattgga
gctcccggttgtaaaggtgatccaggcgacaagggaccagatggctacccaggagatgct
ggtgaaactggactattaggtgacaaaggagaaaagggtgacacaggccttcctggaaag
ccaggccccccaggccctaagggtaatccaggtctgaagggtgaaagaggaaaccaagga
aatccaggacagcctggacaaagagggagtccgggagaacgaggcccggagggaagcaga
ggtcggcctggggaaaatggactcaagggcgctaaggtgaggagatcacgctgggacctg
ggactaccgggaccgaggggtcagccaggagaactaggcgcccctggacgaaatggcacg
acgggagatcctggagattcaggaccaaggggagacattgggccacttggaccaaagggt
gacagaggaaggcaaggtttcagctatcctggatcaaggggaccgcctggagacaggggt
gcaccaggtaggagaggacccagagggagcagaggtgactgtggcgccaaaggagaatct
ggaaataaagggcaaccaggagcgcctggtgaaccaggccagtcggggccgccaggagaa
agagggcctagaggagaacgtggacctgatggggatccaggaccagcaggcgattctggg
ctcactgaatgtgatgtcatgagctacatcagagagacgtgtggttgctgcgactgcgag
aagcactgtggagctatggacatcgtgtttgtaattgatagctcagagagtgtcgggctg
acaaactttaccctggagaagaactttgttatcaacaccatcaacaggctgggatctatg
gcgcccgaacctacatcaacaacaggcacaagagttggagttgtacaatacagtcacaac
gggacctttgagagcattcgtctcgatgacccaaacataaactccatgactgcattcaaa
actgcagtgaagaatctgaggtggattgctgggggcaccttcaccccctctgctctgaag
tacgcctatgataacctcatcagggacagcaagagagcccgatccaaagtgtccgtcgtc
gtggtcacagacggccgctttgacccccgagacgacgacaatcagctcacatacctctgc
aacgaccccgctgtggtggtgaatgccatcgggataggggacatgtttgacaccagacac
gacagcgagactctggtgtcaatcgcatgcaacaagaaggatcgggctactgagatgagg
cgctacagcgatttggtggctgatgaattcttagaaaagatggaaactgtcctctgtcct
gatccagtcattaagtgccctgatctcccctgtacaagtgaacttgactcagcaccttgt
gttgcgaggcctgtggatttggtatttctattggatggttcagagcgtctcggggagaga
aacttcctccttgttcgtgaatttgttcagaaggttgcagacaggctggtactggccagg
accaggaccgatcgagagcgagcccgtctggcactgatggagtttggcaaggagtcagag
aatcgggtggctttctctctaacacatgaccctgtccagattgttaacaatttaacagct
ttacagtatctagattcttcttcaagcgtggcgcccggcatcatacatgccatcaacaac
atcctggttagaggaagcgcccggcaaacgaggcccaatgcagagatttcattcgttttc
attacagatggtgtcactaacagcgacaacctggacgaagcgatcagtgccatgcgtcgt
tacgaggtggtctccacggtgattgccacaggaagtgatgttgatcaagaaatcctgaca
aagctggctatgggggaccagcacgccatctttaaagcagaaaaattctcagatttttta
aggtccggtatgtttgatcgtttcatccagtgggtgtgttag
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