Maylandia zebra (zebra mbuna): 101475367
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Entry
101475367 CDS
T02814
Name
(RefSeq) serine/arginine-rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03040
Spliceosome
mze05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101475367
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101475367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mze03041
]
101475367
Spliceosome [BR:
mze03041
]
Common components
Common spliceosomal components
SR proteins
101475367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
101475367
NCBI-ProteinID:
XP_004558249
UniProt:
A0A3P9BKS2
LinkDB
All DBs
Position
LG14:25829531..25834095
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AA seq
244 aa
AA seq
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MSGVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFE
DPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGSRGGFGIGGAPRGRYGPPSRRSEYRVVV
SGLPQSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEG
ETAYIRVKLDGPRSPSYGRSRSRSRGSRSRSRSRSASRSRSNSRGRGRGSPRYSPRHSRS
RSRS
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgttgtgcgaggccccgctgggaacaacgactgccgaatttacgtgggaaac
ctcccgccagatatacgcacaaaagatgtggaagacgtgttctacaagtatgggacgatt
cgagatatcgacttgaagaaccggagagggggacccccgttcgcctttattgaattcgaa
gaccccagggacgctgatgatgccgtctatggacgtgatggatacgactacgacggctac
agactgcgagtggagtttcctcggagcggcaggggatccagaggagggtttgggatcgga
ggagcgcccagaggcagatatggacccccttccagacgatctgagtacagagtcgttgtg
tcagggctccctcagagcggcagctggcaggacctgaaggaccacatgcgtgaggcaggc
gacgtgtgctacgccgacgtttacagagacgggactggagtggtagaatttgtgcgcaaa
gaagacatgacctatgccgttcgcaagctggacaacaccaaattccgctcccatgaggga
gagactgcttacattcgtgtgaaattagacggtccccgcagcccaagttatggaagatca
cgctctcgcagccgtggcagccggagcaggagccgcagtcggagcgccagccgcagtcgc
agcaattcccgtggtcgtggcagaggatctccccgctactcaccccgtcacagccgctct
cgctcccgttcctaa
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