Maylandia zebra (zebra mbuna): 101475390
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Entry
101475390 CDS
T02814
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
mze
Maylandia zebra (zebra mbuna)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
101475390
NCBI-ProteinID:
XP_004540387
UniProt:
A0A3P9AXR3
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Position
LG19:complement(18616477..18621299)
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AA seq
647 aa
AA seq
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MDIRVATILLLVVASAAAHGKGYVVRKVMPVKSHVVSVAGEPGPPGEPGPEGPSGPPGPP
GENGVGYAGPQGPPGPPGSPGRSIAGKPGSPGGPGKPGRPGDSGEKGDTGATGPQGPRGV
PGSPGSPGPAGLSATGKPGPSGLPGAMGPRGEPGLKGHPGIPGLPGSKGDRGVGAPGPQG
ETGPEGPMGPPGATGSSGVGKPGKPGSPGEPGKSGSPGSDGAPGPMGPQGPKGHTGAPGV
GIPGKPGENGAPGLPGPSGPKGNQGPTGSTGAPGVPGYGKPGANGEKGERGATGSTGATG
PKGEQGPTGYTGATGATGPTGPTGPQGERGFTGAPGAVGSKGDTGATGPQGPKGNKGDQG
AQGFQGKQGYPGPAGPAGARGETGPTGEKGNGGAPGTPGAPGIPGPAGPKGHPGRPGEQG
PSGSDGAPGSRGPTGPQGPAGAPGLKGHPGLPGAPGPAGLAAKGLTGPEGPPGQPGEPGS
DGEPGPAGPPGPPGPPGEVAFEKGKGMEVSEIMVKSPMSAFTAALTTPYPPAGSPIKFDH
IVYNAENHYDPESGIFTCQVPGVYFFSYSIHVNGAHALVALYKNGQPVMFTYDEYNKGFL
DQMSGSAVLLLDEQDTVYVQIPDDEANGVFAAENVHCSFSGFLIAST
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggacatacgtgtagcgaccatcctcctccttgtggtggcctctgcagcagcccacgga
aagggttacgtagtgaggaaggtgatgcctgtgaagagccatgtggtgtcagtggcaggt
gagcctggtcctccaggtgagccaggccccgagggaccttctggccctcctggcccacca
ggtgaaaatggtgtaggctatgctggacctcaaggacctcccggaccccctggatctcct
ggccgctccattgctggtaaacctggatctccaggtggtcctggcaaacctggcaggcct
ggagactctggtgagaagggagatactggagccactggccctcaaggacctaggggagtc
cctggatcaccaggaagccctggacctgctggcctctctgctactggcaagcctggacca
tcaggtcttcctggagcaatgggacctagaggagagcctggtctgaaaggacatccaggt
atccctggactgccaggttctaagggtgatagaggggtgggagcacctggacctcagggt
gagacaggacctgaagggcctatgggtccacctggagctacaggttcatctggagttgga
aagccaggaaaaccaggttccccaggtgagccaggaaaatcaggtagcccaggtagcgat
ggtgcccctggtcccatgggacctcagggacctaaaggacacaccggtgccccaggtgtt
ggtattccaggtaaaccaggtgagaatggtgcccccggtctgcctggtccaagtggccct
aaaggcaaccagggacctactggatccactggtgcccctggagtgcctggatatggaaag
ccaggtgcaaatggagagaaaggagaaaggggagctacaggtagcactggtgctacaggc
ccaaagggtgagcaaggtccaactggatatactggtgctactggtgcaactggcccaact
ggtcctactggacctcagggtgaaagaggtttcacaggtgcacctggtgctgttggctct
aaaggtgacacaggagcaactggtcctcagggacctaagggaaacaagggagatcaggga
gcacagggtttccaaggtaagcagggttacccaggaccagctggtcctgctggggccaga
ggggaaactggacccacaggtgaaaaaggaaatggaggtgccccaggtaccccaggagcc
ccaggtatcccaggccctgctggacccaaaggtcatcctggtcgcccaggtgagcaaggt
ccctctggatcagatggtgcaccaggttcaagaggacctactgggcctcaaggtcccgct
ggtgctccaggcctcaagggacacccaggtctccctggtgcccctggccccgctggtttg
gctgctaagggtctcactggacctgagggtcctcctggtcaacctggtgagcccggctct
gatggagaacctggcccagctggccctcctggtccccctggccctccaggtgaggttgca
tttgagaagggcaagggcatggaagtgagcgagattatggtgaagtcccccatgtctgct
ttcactgcagctctgaccaccccctaccctcctgctggcagccccattaaatttgaccac
atagtgtataatgctgagaatcactatgaccctgagtcaggcattttcacttgccaggtt
cctggagtgtacttcttctcttatagcatccatgtcaatggagctcatgccctggtggct
ctgtacaagaatggccagcctgttatgttcacttatgatgagtacaacaagggtttcctt
gaccagatgtctggtagtgctgtcctcttgctcgatgagcaggatacagtttacgtccag
atccctgacgatgaggccaatggcgtctttgctgcagagaatgtccactgctctttctct
gggttcctcatcgcttcaacgtga
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