Maylandia zebra (zebra mbuna): 101475408
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Entry
101475408 CDS
T02814
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03013
Nucleocytoplasmic transport
mze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101475408 (srrm1)
03015 mRNA surveillance pathway
101475408 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101475408 (srrm1)
03041 Spliceosome [BR:
mze03041
]
101475408 (srrm1)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101475408 (srrm1)
Spliceosome [BR:
mze03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
101475408 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
101475408
NCBI-ProteinID:
XP_004566623
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All DBs
Position
LG19:8948077..8961007
Genome browser
AA seq
867 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKVDEEKKEKDLRERAQSKSPRRRKTRSPSPRRRSP
SPRRRSPAKRERKRSPSRSPRRKQASPVGGSSPPPPLMQLSTKSSEEPVEPDTSGRAVPE
AVVQEASSTCETVVEVVKADSVNEVKEQSPEKTLKKEERPRSREREKDTRRERHHRSRSH
SRSRRRRSRSRSYSPRRRQSPRRRMSPRRRSPPRRAPASSRHRPRRSPVRRRRSRSASSS
GSSSSGSRSPKKAVKRISTTPPRKQVHHPDTSISPTGKNRRSPSPRARRGRGSPSPPRSS
GFKRKQGGRADSPPDNVKPRPSEGSDSEEDKNEKGATADSVQQRRQYRRQNRQSSSETGS
SSSEDEAPKRATGGSGARNGEVRRRRSRTQSPRRRHRDPSPRKRRSPSPVRRRRTPTPPR
RRRSPSPPQRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPLPSQKRKLSNSPMKRSSPAT
KRRPSRSPRHRSSPPPRRRSPPSSTSPPRHRRSPMLPPGRRSRDARSPVAASRRLSPSPA
NRSHAVRGSTTPPRRYETLSTSPSNQRRQQSPPHNKVIRRVSRTPERRDNQRPSPSPQPI
RRASSRSVSPEPAAQKRPTQASASPSPSRSASASPPPAKKASSGSGSRSPSKTSDVDGGA
KKKKKKKEKKHKKEKKHKKHKKHKKEKSSSAAVTGDTQENQAAEEDRDSRKESDSDVENT
LDDLEKHLREKALRSMRKAQMSPSQMS
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggtacgagtgcggagcaggacaaccgcttcagcaacaag
cagaagaaactgctgaagcagctgaaatttgcagaatgtttggacaaaaaggtggacatg
accaaagtgaacctagaagtcatcaaaccttggattacgcagcgagtcactgagattttg
gggttcgaggatgacgtcgtcatagagttcatatttaaccagcttgaggagaagcacccg
gatagcaagatgatgcagatcaacctgactggctttctgaacgggaagaacgcccgggag
tttatgaaggacctctggcccctgctgctgagcgcccaggagaacattgcgggcatccca
tcagcttttctggaacagaagaaagaggaaatcaaacagagacagattgaacaggagaaa
cttgcttctctgaagaaggtggatgaggaaaagaaggaaaaggaccttagagaacgggct
cagtcaaagagccccaggagacggaaaacgaggtcaccatcgccgcgaaggaggtcgcca
tcaccacggaggaggtcaccagcgaagcgggaaaggaaacgcagcccctcacgctcacca
aggcgcaaacaagctagtccagttggtggcagttcaccccctccgcccctgatgcagctg
tccacaaaatcttcagaggagccagtagaaccagatacttcaggaagagctgtgccagag
gcagtcgtccaagaagcttcttccacctgtgagacagttgtggaagtagtgaaagccgac
tctgtgaatgaagtcaaagaacagtcgccagagaaaacccttaagaaagaagagagaccg
aggtcacgagaaagggagaaggacacgaggagggaaagacaccatcgctcacgctctcat
tctcgttctcgcagacgccgctcgcgctctagatcgtactcccctcgcagaagacaaagt
cccagaaggagaatgtctcctcgtcgtaggagccctcctagacgtgcgccagctagctcc
aggcacagacccaggcgttcccccgtccgcaggaggcgctcccgctctgcttcatcctct
ggtagcagctcatcaggctctcgctcgcctaaaaaagcagtgaaaagaatatctaccaca
ccaccccgaaaacaggtccatcatcctgatacttccattagtcccacaggcaagaacaga
cgatcaccgtctccacgagctagaaggggccggggctctccttccccacccagatcatca
gggtttaagagaaaacaaggaggaagggctgattctccccctgacaacgtcaagcccaga
ccatctgaaggctccgactcggaggaggataaaaatgagaaaggggcaacagcagattcg
gtgcaacagcgacgtcagtatcgcaggcagaaccgacaatcgtcttcagaaacggggtct
tcatcctcagaagatgaggcgcccaagagggcaacaggagggtcaggtgccagaaatggt
gaggtcaggaggaggcgcagtcgtacacagtctcctcgaaggcgacacagggatccctcc
ccgaggaaaagacgctctccatctccagtacgcagacgtcgcacccctactcctcctcgg
cgtcgcagatctccctctcctcctcaaagacgcaggtctccttccccaccaccccgtcgt
agatctccatcccccagacgatattctccccctatccaacgtcgctacagtccttcacct
ttgccctctcagaaaaggaaactgtctaactcgccaatgaaacgctcttcaccggctacc
aagcgacgtccctccagatcccccagacatagaagctctcctcctccaagaagacgatcc
cctccctcctcgacatctccacccagacacaggaggagccccatgctgccacctgggcgg
cgaagcagagatgctcgatcccctgttgcggcatccagacgcctctccccatcccctgca
aaccgcagtcacgctgttagaggatccacaacccccccacggcgctatgaaaccttgagc
acatctccgtctaaccagcgcagacagcagtcacctccacacaataaagtcatccgcaga
gtttcacgcaccccagaacgccgtgacaaccagagaccatctccaagccctcagcctata
agaagagcgtcctccagatctgtttcccctgaaccagcagctcagaaacgtccgactcaa
gcatccgcctccccttccccgtctcgctctgccagtgcgtctccaccaccagccaagaaa
gccagcagcggttctggaagtcgatctccaagcaagacttcggatgttgacggcggtgca
aagaaaaagaagaagaagaaggaaaagaaacacaagaaggagaagaagcataaaaagcac
aagaagcataagaaggagaagagcagtagtgctgctgtgactggagacacacaggagaac
caggctgcagaggaggacagagattccagaaaggaatcggacagtgacgtggaaaacacc
ttggatgatctggaaaagcaccttagagagaaagcgctgcgctccatgaggaaggcccag
atgtctccatcacagatgtcctga
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