KEGG   Maylandia zebra (zebra mbuna): 101475542
Entry
101475542         CDS       T02814                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
mze  Maylandia zebra (zebra mbuna)
Pathway
mze03030  DNA replication
mze03410  Base excision repair
mze03420  Nucleotide excision repair
mze03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mze00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101475542 (rfc3)
   03410 Base excision repair
    101475542 (rfc3)
   03420 Nucleotide excision repair
    101475542 (rfc3)
   03430 Mismatch repair
    101475542 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mze03032]
    101475542 (rfc3)
   03036 Chromosome and associated proteins [BR:mze03036]
    101475542 (rfc3)
   03400 DNA repair and recombination proteins [BR:mze03400]
    101475542 (rfc3)
DNA replication proteins [BR:mze03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101475542 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    101475542 (rfc3)
Chromosome and associated proteins [BR:mze03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    101475542 (rfc3)
DNA repair and recombination proteins [BR:mze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101475542 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    101475542 (rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_16 AAA_11 ABC_tran DUF2247 ATPgrasp_ST DUF1409
Other DBs
NCBI-GeneID: 101475542
NCBI-ProteinID: XP_004550189
UniProt: A0A3P9DF12
LinkDB
Position
LG10:16413803..16418953
AA seq 356 aa
MSLWVDKYRPSSLGKLDFHKEQAAQLKNLVQGGDFPHLLVYGPSGAGKKTRIMCLLRELY
GPGVEKLRIEHQTIVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQRDFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRLILCSTSTSKVIGPIRSRCL
AIRVPLPSTEEVCNILTSVCKKEGLVLPPELAKQIGEKSGRNLRKALLMCEACRVQQYPF
SVDQDVPETDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPEIIMKCLVKELL
NNCDGQLKTEVAHIAAYYEHRLQLGSKAIYHLEAFTAKFMAIYKKFMEDGLDAMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtttgtgggtggacaaatatcgtccgtcgtccctcgggaaactggactttcataaa
gagcaggcggcgcagctcaaaaacctggttcagggtggtgacttcccacacttgttggtg
tacggtccatcaggtgcaggcaagaagactcgcatcatgtgtctgctgagggagctctac
ggtcctggggtggaaaagcttcgcattgagcaccagaccattgtggctccctcaaagaag
aaaattgagattaacaccatagccagcaactatcacttggaagtaaatccaagtgatgcg
gggaaccaggaccgcgtggtgattcaagagctgatcaaaactgtggcacagtctcagcaa
atccagtcgagcacacagagagacttcaaagtggtgttgctaacagaggtggacagactg
acgaaggatgcccagcacgctttgcgtcggacgatggaaaagtacatggccacctgcaga
ctcatcctctgctccacctctacatccaaagtcatcgggccaattaggagccgttgtctg
gcgattagagttcctctgccgagcacagaagaggtttgtaatattcttacgtccgtctgt
aaaaaggagggtctcgtcctcccgcctgagctggccaagcaaatcggcgagaaatctggt
cgcaacctccgtaaagcgcttttgatgtgcgaagcctgccgagtgcagcagtatccattc
tcagtggaccaagacgtcccggagacagactgggaggtttatcttagagaaacggctaat
gccatcgtcagccagcagagtcctcaaaggttgttggaggtccgagccagactgtatgag
ctcctgacccactgcatccctcctgagattatcatgaagtgtctcgtgaaagagttgctt
aataactgtgatgggcagctgaagacggaggtggctcacattgcagcctactatgagcac
agactacagctggggagcaaagccatctaccacctggaggcgttcactgccaagttcatg
gccatctacaagaagttcatggaagatggtctggatgcgatgatgttttga

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