KEGG   Maylandia zebra (zebra mbuna): 101475682
Entry
101475682         CDS       T02814                                 
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
mze  Maylandia zebra (zebra mbuna)
Pathway
mze03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mze00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101475682 (exosc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mze03019]
    101475682 (exosc2)
Messenger RNA biogenesis [BR:mze03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     101475682 (exosc2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     101475682 (exosc2)
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 ECR1_N_2 RRP40_S1
Other DBs
NCBI-GeneID: 101475682
NCBI-ProteinID: XP_004538110
UniProt: A0A3P9CRW6
LinkDB
Position
LG7:43571413..43575637
AA seq 293 aa
MAADMRLPTIRKTVSLSASAFDRKDLVVPGDVITSDTGFMRGHGTYVDDDKLTASVAGEV
QRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVQTNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFLDGALSLHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASIILGNNGFVWLYPTPGQQEEEAGGFYTSLEPVSLLDREVISRLRNC
LLALAAHKVLLYDTSVLYCYESSLQHQVKDLLKPEVMEEIVMLTQQKLLEQEG
NT seq 882 nt   +upstreamnt  +downstreamnt
atggctgcagatatgagattaccgaccattagaaaaaccgtgtcgctatcagcgtctgct
tttgaccgaaaagatctggtcgtaccgggggatgttattacttcagacactgggttcatg
aggggtcatggcacctacgttgatgacgacaagttgacagcttcagtcgcaggagaggtg
cagagggtggacaaactcatctgtgtcaggccacttaagaccaggtttaatggtgaggtt
ggagatgttgtggttggcagaattacagaggtgcagcagaaaagatggaaggtgcagaca
aactcccgactggactctgtcctcttgttgtcttctgtaaacctgccaggaggagagttg
aggagaagatcagcagaagatgagctgaccatgagagaatatcttcaggagggagatctc
atcagtgcagaggtgcagtctgtcttcttggatggagctctttcacttcacacccgtagt
ttaaagtatggaaaattgggtcaaggagtactggtccagctttccccttctctgatcaag
aggcagaaaacgcatttccacaacctgccgtgtggcgcatccattatcctggggaataat
ggctttgtgtggttgtatcccacaccgggccaacaagaggaggaagctgggggtttctac
accagccttgagcctgtcagcctgttggatcgagaggtcatttcacggttgagaaactgc
ctgctggctttggctgcgcacaaagtcctcctgtatgacaccagtgttctctactgctac
gaatcatcacttcagcaccaggtgaaggacctcttaaaaccagaggtgatggaggagatt
gtaatgttgacacaacagaagctcttggaacaggagggttaa

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