Maylandia zebra (zebra mbuna): 101475682
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Entry
101475682 CDS
T02814
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101475682 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101475682 (exosc2)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101475682 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
101475682 (exosc2)
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
101475682
NCBI-ProteinID:
XP_004538110
UniProt:
A0A3P9CRW6
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Position
LG7:43571413..43575637
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AA seq
293 aa
AA seq
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MAADMRLPTIRKTVSLSASAFDRKDLVVPGDVITSDTGFMRGHGTYVDDDKLTASVAGEV
QRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVQTNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFLDGALSLHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASIILGNNGFVWLYPTPGQQEEEAGGFYTSLEPVSLLDREVISRLRNC
LLALAAHKVLLYDTSVLYCYESSLQHQVKDLLKPEVMEEIVMLTQQKLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagatatgagattaccgaccattagaaaaaccgtgtcgctatcagcgtctgct
tttgaccgaaaagatctggtcgtaccgggggatgttattacttcagacactgggttcatg
aggggtcatggcacctacgttgatgacgacaagttgacagcttcagtcgcaggagaggtg
cagagggtggacaaactcatctgtgtcaggccacttaagaccaggtttaatggtgaggtt
ggagatgttgtggttggcagaattacagaggtgcagcagaaaagatggaaggtgcagaca
aactcccgactggactctgtcctcttgttgtcttctgtaaacctgccaggaggagagttg
aggagaagatcagcagaagatgagctgaccatgagagaatatcttcaggagggagatctc
atcagtgcagaggtgcagtctgtcttcttggatggagctctttcacttcacacccgtagt
ttaaagtatggaaaattgggtcaaggagtactggtccagctttccccttctctgatcaag
aggcagaaaacgcatttccacaacctgccgtgtggcgcatccattatcctggggaataat
ggctttgtgtggttgtatcccacaccgggccaacaagaggaggaagctgggggtttctac
accagccttgagcctgtcagcctgttggatcgagaggtcatttcacggttgagaaactgc
ctgctggctttggctgcgcacaaagtcctcctgtatgacaccagtgttctctactgctac
gaatcatcacttcagcaccaggtgaaggacctcttaaaaccagaggtgatggaggagatt
gtaatgttgacacaacagaagctcttggaacaggagggttaa
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integrated database retrieval system