Maylandia zebra (zebra mbuna): 101475932
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Entry
101475932 CDS
T02814
Name
(RefSeq) thrombospondin-4-B
KO
K04659
thrombospondin 2/3/4/5
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04145
Phagosome
mze04510
Focal adhesion
mze04512
ECM-receptor interaction
mze04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101475932
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101475932
09144 Cellular community - eukaryotes
04510 Focal adhesion
101475932
09142 Cell motility
04820 Cytoskeleton in muscle cells
101475932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mze04131
]
101475932
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mze04147
]
101475932
00536 Glycosaminoglycan binding proteins [BR:
mze00536
]
101475932
Membrane trafficking [BR:
mze04131
]
Endocytosis
Phagocytosis
Opsonins
101475932
Exosome [BR:
mze04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101475932
Exosomal proteins of colorectal cancer cells
101475932
Exosomal proteins of bladder cancer cells
101475932
Glycosaminoglycan binding proteins [BR:
mze00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101475932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
cEGF
DUF7630
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
101475932
NCBI-ProteinID:
XP_004549795
LinkDB
All DBs
Position
LG7:48189364..48207020
Genome browser
AA seq
940 aa
AA seq
DB search
MNVWTALTLALQLLLKMCLHVEAQALVYDLLTSPDCLPDLLQGGLTGQGVNEAFILTSFK
LQPKTGTTVFGLHNPRDNSKYFEFTVMGKLNRAVLRYLRSDKRMASVTFNNLVLADGQQH
RLLFHLRGLQQQGPGGVELHLDCRLVETVRDLPAAFQGLPAGYGTVELKTMQAREQESLD
ELKLVVGDSFENVASLQDCHFQQRDSVQTLGVNTKQLSNQMLELTKVINELKDVLIQQVK
ETSFLRNTISECQACGLGGTEVVKPRCAPGVCFRDDMCIETAEGVECGPCPDGYTGDGFN
CDDVDECQFNPCFPGVRCVNTAPGFRCDACPLGYTGLPVEGVGIVYAQTNKQVCDDIDEC
KGPDNGGCTANSNCHNSAGSYHCGSCKSGFTGDQVKGCKPEISCGNSLTNPCDVNAQCIV
ERDGSISCQCGIGWAGNGYLCGKDTDIDGYPDEKLKCKDPNCRKDNCVFVPNSGQEDADR
DGYGDACDEDADGDGIPNEQDNCRLKANVDQRNSDKDSHGDACDNCRLVENPDQRDTDGD
GKGDACDDDMDGDGLKNFLDNCQRVQNRDQLDRDGDGVGDACDSCPDIPNPNQSDVDNDL
VGDSCDTNQDSDGDGHQDTKDNCPLVINSSQLDTDKDGLGDECDDDDDNDGIPDVLPPGP
DNCRLVPNPDQIDDNSDGVGDICESDFDQDKVIDRIDNCPENAEITLTDFRAYQTVVLDP
EGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIF
GYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSRSGPGEHLRNSLWHTGDTT
DQVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRARFYEGTELVADSGVTIDTTMRGGR
LGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSTQHGVDSL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgtggacggccctcacactggccttgcagctgctattaaaaatgtgcttacac
gtggaagcacaggctttggtctacgatctgctcacctcacccgactgcctgccagacctg
ctgcaggggggcctgaccgggcaaggggtgaacgaggctttcatcctaacctccttcaag
ttgcagcccaagaccggaaccactgtgtttggcctgcacaaccccagggacaacagcaag
tactttgagttcacagtgatggggaagctcaaccgagccgtgttacggtacttgaggagt
gacaagaggatggcctctgtcacattcaacaacctggtgctggcagatggccagcaacac
cgactgctgttccacctcagggggctgcagcagcaggggccaggtggggtggagctgcat
ctggactgcaggctggtggagacagtcagggatcttcctgctgccttccagggtttgcca
gcaggctatggcacagtggaactaaagactatgcaagccagagagcaggaaagcttagat
gaactaaagctggtggttggggactcatttgaaaacgttgcgtcgctacaagactgccac
ttccagcaaagagactcagttcagactctgggggtcaacacaaagcagctgtccaatcaa
atgctggagttaacgaaggtgataaatgagctgaaagacgtcctaattcagcaggttaaa
gaaacatcctttctcaggaataccatctcagagtgtcaggcctgtggtctaggtggcaca
gaggtggtgaagccaaggtgtgcaccgggtgtctgtttccgtgacgacatgtgtatagaa
acagcagaaggtgttgaatgtggaccatgtcctgatgggtacactggagatggttttaac
tgtgatgatgtcgacgagtgtcagtttaacccctgctttcctggagtgcgctgcgtcaac
actgccccaggcttccgctgtgacgcctgtccgctgggctacaccggcctgccagtggag
ggtgtgggcatagtgtacgctcagaccaataaacaggtctgcgatgacatcgatgaatgc
aaaggacctgacaatggaggctgtactgcaaactcgaactgccacaactctgcgggctcc
tatcactgtggtagctgtaagtcaggattcacaggagatcaggtgaagggctgtaagccg
gagatcagctgtggcaacagcctgaccaacccctgtgatgtcaacgctcagtgtattgta
gaaagagacggatccatctcttgtcagtgtggaattggctgggctggaaatggatacctg
tgtggaaaggatacggacattgatggatatccagatgagaaactcaaatgcaaagatcca
aactgcagaaaggataactgtgtctttgttcctaactctggtcaagaggatgccgacaga
gatggttatggagatgcctgtgatgaagatgcagatggcgatggtattccaaacgaacag
gacaactgcaggttaaaagccaatgtggaccagaggaacagcgacaaggacagccacggc
gacgcctgtgataactgccgcctggtggagaaccccgaccagagggacactgacggtgat
ggcaaaggggacgcctgtgatgatgacatggatggagatggtctgaagaacttcctggat
aattgccagcgtgtccagaacagagaccagctggaccgggatggagacggggtgggagac
gcttgtgacagctgccccgacatccccaacccaaatcagtctgatgttgataatgacttg
gttggggattcctgtgatacaaaccaagacagtgatggcgatggtcaccaggataccaag
gataactgcccactcgtgatcaatagctctcagctggacactgacaaagacgggctgggt
gacgaatgcgatgacgatgatgacaacgacgggataccggatgttttaccaccgggtcca
gacaactgccggctggtaccaaatcctgatcagattgatgataacagtgacggtgttgga
gatatttgtgagtctgactttgaccaggacaaagtgatagacaggattgataattgtcct
gaaaatgccgagattaccttgactgacttcagggcctatcagactgttgtgctggacccc
gagggcgatgcccagattgaccccaactgggttgttttgaaccagggaatggaaatcgtt
cagaccatgaatagtgatcctggacttgctgtcggttacacggctttcagcggcgtggac
tttgaggggacttttcacgtgaatacagtcactgatgatgactacgctggcttcatcttt
ggttaccaggactcatcctccttctacgtggtgatgtggaagcagactgaacagacctac
tggcaggcaacccccttcagagccgtggccgagcccggcatacagctgaaggctgtgaag
tctagatcaggccccggcgagcatttgagaaactcactgtggcacacgggagacaccacc
gaccaagtgcgcctgctgtggaaggacccgagaaatgtgggctggaaggataaggtgtcc
tatcgctggtacctgcagcaccgcccacaggttggatacatcagagcccgcttttacgaa
ggaactgagctggttgcagactccggcgtgaccatcgacacaaccatgagaggaggacga
cttggcgtgttctgtttctcgcaggaaaacattatctggtccaatctgaaataccgctgc
aatgacaccatcccggaggatttccaggagttcagcactcagcatggcgtcgactcgctc
taa
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