Maylandia zebra (zebra mbuna): 101475969
Help
Entry
101475969 CDS
T02814
Name
(RefSeq) brevican core protein isoform X1
KO
K06795
brevican
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mze00535
]
101475969
00536 Glycosaminoglycan binding proteins [BR:
mze00536
]
101475969
04091 Lectins [BR:
mze04091
]
101475969
Proteoglycans [BR:
mze00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
101475969
Glycosaminoglycan binding proteins [BR:
mze00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
101475969
Lectins [BR:
mze04091
]
C-Type lectins
Lecticans
101475969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
I-set
Ig_3
EGF_TEN
Izumo-Ig
EGF_2
Motif
Other DBs
NCBI-GeneID:
101475969
NCBI-ProteinID:
XP_004560163
LinkDB
All DBs
Position
LG11:24981394..25008477
Genome browser
AA seq
1246 aa
AA seq
DB search
MKLDVPLRALLCAICFFVLLSPSTSLHEPACLFSDDSKLLHVTIPATQPVFAVLGGSLTL
PCLVSLAHPPPSPSTNGRHAVLSVPRIKWSILNHGMETEILVARGDRVRVSEAYKERASL
FNYAYSPADLTLRLESVRQNDTGFYRCEVQQGLEDANDVVQVKVKGVVFHYRDASSRYAF
TFEQAKEACEDIGADIATPEQLLASYNSGYEQCDAGWLSDHSVRYPIQMPREGCFGDMDG
LPGVRNYGLLEPDELYDVYCYVENIHGEVFHGSTPQRFTFGEAKAYCLSHGAELATTAQL
YAAWNDGLNHCSPGWLADGSVRYPIVTPRERCGGGEPGVRTVYRYSNQTGFPETHSRHDV
YCFRSDNGPYTDSPQVLATEPEDIGQDIVFVTTSSQEDVSKSEAMTDGVAQTTNPIKQGT
VDAHTVTISQLTADIPQTATPLSDHQEHMSTNDTWELVKKANYPESYQPAPEEDPDTDHE
ESYIISSPSPNTDNVVTVGYYSIIPITDVADPESGEPTEHHISMTENPDVPVSNATSGAD
EVHQEWDLPVLQKDHTPYVPEENASVTELVYVSTSYDASEQPEEASTGTIEEISVAMTSL
HTEVTDVLATSPMPAFAFDKSTADDSPDEEQEHSVTVDLDTTAITKVVTKSNLDSSYDPT
QAHSDVTESSIPIEHSAEELSSTSGDVATDDLAEQSGHNPPTVISTAEVITFSDDTGLSI
DAPVLKNQPVLLLGSPISATLSPPPVEVEASSEIITYIPESNVSSGAEPLDDIQDKPEME
GLGDSSVIILHTAQNITNIAPEETDKDVTEGPGKSSGENPENSGDTNSEGVNGDAGTNAP
HSEIKITLIPHLTLTPNWEPELSPATPQESRSDREYSAEPAAAPEETDDASNEQEINTGT
INAEHGSHGSMEVTGTDEPSVKICTWRPEEEEISSSALTTDNSDMTIIAPTIYPVYFEGN
EQTAMAASLPAAKVSAAGKGGFSDSCLENPCLNGGTCVDGESLRCFCLPGYGGDFCQKDL
EMCEPGWEKFQGYCYRHFSKRQSWEAAEQHCRMCGGHLLSVMTPEEQDYINEKYREYQWI
GLNDRTIEGDFRWSDGNPLLYENWYKGQPDSYFLSGEDCAVMVWHDGGRWSDVPCNYHLS
YTCKKGVTSCGEPPHVPHAKVFGKKRLRYETNTKVRYYCEEDFVQKMNPVIKCLPGGQWE
EPQITCMPTHSEEEDLVTVHAEQREEAMGTATEKAAPLYWDINWNV
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggatgtgcctctgcgtgcgctgctgtgcgccatctgtttctttgtcctgcta
tcgccctctacttccctccatgagcctgcttgcctcttctcagatgattcgaagcttctc
catgtaaccatcccagccacccaacctgtgtttgcggtgcttggtggctctctgacttta
ccctgcctggtgtctctggcacacccgccgccatccccctctaccaatggtcgccacgct
gtgctgtctgtcccccggattaaatggagtatcctgaatcatggcatggagacagagatc
ctggtggcccgtggtgacagagtgagggtcagtgaggcctacaaggaacgggcctctctg
ttcaactatgcctactcccccgctgacctcaccctgcgtcttgagagcgtgaggcagaat
gacactggtttttaccgctgtgaggtgcagcaaggtctcgaggatgctaatgatgttgtg
caggtcaaggtcaaaggtgtggtgtttcactaccgcgatgcatccagccgctacgctttt
acctttgagcaggctaaagaggcttgtgaggacatcggggctgacatcgctaccccagag
cagctacttgcttcttataacagcggatatgagcagtgcgatgcaggctggctctcagac
cactctgtgagataccccattcagatgccaagagagggctgttttggagacatggatggc
ttgccaggagtgaggaactatggactattagagcccgatgagctatatgacgtgtactgc
tatgtggagaatattcatggtgaggtgttccatggctccaccccccagcgtttcaccttt
ggtgaggcaaaggcctactgtctcagtcatggtgcagagttggccaccactgctcagctt
tatgcagcttggaatgacggactaaatcactgcagcccagggtggctggcagacgggagt
gtgcggtaccccattgtcacccctagagagcgctgtggaggtggtgaacctggggtcaga
accgtttacagatacagcaaccagacgggctttcctgagacccactctcgacatgatgtc
tactgcttcagaagtgataatggcccctacacagattctccccaggttttagccactgag
ccagaggatattggccaagatattgtttttgtaactacgtcctcgcaggaggatgtcagc
aaaagtgaagcaatgacagatggagttgcccagactacaaatccaataaagcagggtact
gtcgatgctcacacagtgacaatatcacaattgacagcagacattcctcagactgcaact
cctctgtctgatcaccaagagcacatgtccaccaatgacacttgggaactggtaaagaaa
gccaactaccctgagtcctatcagccagcacccgaagaggatccagacacagatcacgag
gagtcgtatataatttcatccccttctccaaacacagataatgtagttacagttggttat
tactccattatacccataactgatgtggcagatccagaaagtggagaacccacagagcat
catatttctatgactgaaaatccagatgtgccagttagtaatgccacatctggagctgat
gaggtgcatcaagagtgggatttacctgttttgcaaaaggaccacactccatatgtccct
gaggaaaatgcctcagtgactgagcttgtctatgtgagcacctcttatgatgcttcagaa
cagccagaagaagccagcactggtactattgaggagatatcagtggcaatgacttcactc
cacactgaggtaacagatgttcttgccacttcaccgatgccagcttttgcttttgataaa
agtacagctgatgattctccagatgaagaacaggagcattctgtgacagtcgatttggac
accactgccataaccaaagtggtcactaagtcaaaccttgattcaagttacgatcctact
caagcccactcagatgtaacggagtcctccatcccaattgagcatagcgctgaggaattg
agtagcacttcaggagacgtggcaacagatgatctggcagagcagagtggacacaaccct
ccaactgtaatctcaactgcggaggtcatcactttctcagacgacacaggcctcagcatc
gacgctcctgttctaaaaaaccaacctgtcttattgttgggatccccaatctctgcaacc
ttatctcctcctcctgttgaagttgaagccagttcagagataataacctacataccagaa
agcaacgtttcatctggggctgagccattggacgacattcaggataaacccgaaatggag
ggattaggagacagctccgtgattatcctccatacagcccaaaatatcacaaatattgca
ccagaggagaccgataaagatgtcacagaaggaccaggtaaatcgtcaggagaaaaccca
gaaaactcaggggacaccaattcagaaggagttaatggtgatgctggcacgaatgcacct
cattcagagataaaaatcactctgatccctcatttaacactcacacccaattgggaacct
gagctttctcctgccacaccacaggagtctcggtctgatcgagaatatagcgctgagcct
gctgctgctcctgaggaaactgatgatgcttctaacgagcaagagatcaacaccgggacc
attaatgcagaacatggatcccatggtagtatggaggtgaccggcacagacgagccttca
gttaaaatatgcacatggcgtcctgaagaggaggagatctccagctcagcactgaccaca
gacaacagtgatatgactatcattgctcccaccatataccctgtgtattttgaagggaac
gagcagactgccatggctgcctccctgcctgctgccaaagtttcagctgcaggaaaagga
ggcttttcagactcctgcttggagaatccctgtttgaatggaggcacttgtgttgacggt
gaatcgttaagatgcttttgtctacctggttatggaggagacttttgccagaaagacctg
gagatgtgtgagccaggctgggagaaatttcaaggatattgttatcgtcattttagcaag
cggcagagctgggaggcagctgagcagcactgtcggatgtgcggcgggcatctgctctct
gtcatgactcctgaggagcaggactacatcaatgaaaaatacagagaatatcagtggatt
ggactaaatgacagaaccattgagggagatttccgctggtcagatggaaacccactgctc
tatgaaaactggtacaaagggcagcctgacagctacttcctgtctggtgaggactgtgcg
gtgatggtgtggcatgatggaggccgctggagcgacgtgccatgcaactaccacttgtca
tacacctgcaagaagggcgtcacctcctgtggtgagcccccccatgttccccatgccaag
gtgtttgggaaaaagcggttgcgttacgagacaaacaccaaagtgcgatactactgtgaa
gaggattttgtccagaaaatgaatcctgtcattaaatgcctgccaggtggccagtgggaa
gagcctcaaattacctgcatgccaactcattcagaagaagaggacctagttaccgtacat
gctgagcagcgcgaggaggccatgggtacagccacagagaaagcagccccgctctactgg
gacattaactggaatgtttaa
DBGET
integrated database retrieval system
