Maylandia zebra (zebra mbuna): 101476033
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Entry
101476033 CDS
T02814
Symbol
col8a1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
mze
Maylandia zebra (zebra mbuna)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
101476033
NCBI-ProteinID:
XP_004551292
UniProt:
A0A3P9D4P6
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Position
LG16:complement(12069560..12081286)
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AA seq
744 aa
AA seq
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MPPLLAPLFLLQLVVLTFVSGGAYYGHKQHPQPYQPMQHIQHIGMGKGGFPQQQYLGKDM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NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccctccttgcccccctcttcctgctacagcttgtagttcttacctttgtgagt
ggaggagcatactacggtcacaagcagcatcctcagccataccaaccgatgcagcatatc
caacatattggcatgggcaaaggtggctttcctcagcagcagtacctaggcaaagacatg
ccctatatgcagtatccccattacagcaaggagctcccaccaatgcccatgcacaaggga
aaggaaaatgctcataaggggggaagctacaatggtggcaaagacaaaggccagacaatt
cctagtggtgctgagggaattccccaaggagagccaggccctgctgggccacctgggcca
cctggaccagagggaccttcaggacctcttgggcctccagggaatgggttgccaggacct
gcaggacggcctggacctcctggtccaccgggaattccaggagttgggaaaccaggtttt
cctgggcttcctggaaaacctggaggaactggtattgttggccctcaaggagaaatgggc
cctaggggtgaagaaggaccacctggacagccagggcctcaaggacccccaggaccacct
ggacttccaggcataggtaaaccaggtgttcaaggtttaccaggtcaaatggggcccaaa
ggtgagccaggtcacaaaggtcttccaggtttaccaggactgccgggacccaaaggagac
aaagggatggggttgccaggaccacctggacacaaagggcttccagggctccctgggcct
gctggtccaagaggattgcctggttttggtaaacctggattgaatggcacaccaggacca
cagggaccaccaggagaaaagggacatccaggacatcaagggccagctggaccaccaggt
gaaaaaggacagcctggcccagcaggtctacctggtcaagggaagccaggtcaaaatggt
ctaccaggacaaccaggcatgccaggtgtgaaaggtcttccaggaccaccaggtttgcca
ggaaagccaggattgccaggatttggtaaaccgggactcccaggaccaaagggtgataaa
ggtatgagtgggccacctggatcacctggaccaaagggagataagggttacagcggtcta
cctggtacgcctggaccttctggaccaaaaggtcctgaaggtcatccaggccctactgga
cccccggggcctatgggtgcacctggtcctaaaggagattgtggagaagaaggatctaaa
ggttttgatggagcccagggtgagcctggtcctcaagggttacctggaaaggatggcctg
ccaggagaccagggagagccaggaccaagaggcccaccaggaccaattggtgccaaagga
gacattggacctgaaggtctacctggtgttcctggttcttcgggacctcctggtcccaaa
ggagaaagaggtgaaccaggtgaagtggggccccaaggccctaaaggaatcccaggaatg
gatggtgcagcaggaccaattgggccccctggtcttcaaggaccaaaaggagattatggt
cctcctggtccaccaggcattgcagttgaaggaggtccaggtctacctggtcccatagga
cccccaggaaaagaaggcccatcaggactccctgggcaacgaggtctgcctggccctcct
ggaccaccaggtccacctggaatacctagtgtgtcacctgaaatggcaggagtgctttct
gagatgggcccaagactagacggtgttaaagctggaagttatggcaagaagggcaagtat
ggaggcaatggggcagaagtaatgggtcccagtgggctggaaatgccagcattcacagct
acagcaatgactccatttccacctgtcggcactccagtcatctttgacaagcttttgtac
aatggtcgccaaaactacaacccccagacaggaattttcacttgtgaagtacctggtatt
tattactttgcctaccacattcattgcaaaggaactaatgtttgggttgctttaatgaga
aacaatgagcctgtaatgtatacatatgatgaatacaaaaagggtttcctagaccaagca
tcagggagtgcagtattacctctacagctaggggacactgtgtatattcagctgccctca
gatcaggcttcaggactttatgctggacagtacgtgcattcctccttcactgggtacttg
ttatatccaatgtaa
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