Maylandia zebra (zebra mbuna): 101476287
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Entry
101476287 CDS
T02814
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X3
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04150
mTOR signaling pathway
mze04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101476287
04150 mTOR signaling pathway
101476287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mze04131
]
101476287
Membrane trafficking [BR:
mze04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
101476287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
SGL
DUF5050
EGF_LRP2
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
101476287
NCBI-ProteinID:
XP_004564919
LinkDB
All DBs
Position
LG17:complement(14261397..14308906)
Genome browser
AA seq
1617 aa
AA seq
DB search
MGVALRSLLLCSFCFLIRGEPLLLYANRRDLRLVDAAHEKANSTVVVGGLEDAAAVDYVF
SKGLIYWSDVSEEAIKRTFFNQSGASALETVVSGLASPDGLACDWLGSKLYWTDSETNRI
EVAELDGSLRKVLFWQELDQPRAIALDPERGFMYWTDWGEIPKIERAGMDGTNRSMIIDK
EIYWPNGLTLDYSQQKLYWADAKHSFIHRSNLDGSFREVVVKGELPHPFALTLFEDTLFW
TDWTTHSIHSCRKQTGGGQRVVHSNIFSPMDIHVFSTKRQPTAVNTPCSLNNGGCSHLCL
LSPVRPFYRCACPTGVQLLEDGKTCRDGATEMLLLARRTDLRRISLDMPDFTDIILQVDN
IRHAIAIDYDPVEGYVYWTDDDVKAIRRSLLDGSDAQFVVTSQVDHPDGIAVDWIARNLY
WTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGDVPKIERADLDG
MERVVMVNTSLGWPNGLALDYEERKIYWGDAKTDKIEVMNMDGTGRRVLVEDKLPHIFGF
TLLGDYIYWTDWQRRSIECVHKRTAVREFIIDQLPDLMGLKATNVHEAFGTNPCADDNGG
CSHLCLYKPQGVQCGCPIGLELIADMKTCIVPEAFLLFSRHTDIRRISLETNSNNVAIPL
TGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKN
LYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDRAAM
DGTGRITLVADVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGLDREVIADDLPHPFGL
TQYQDYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQGGWNACASTNG
HCSHLCLAVPVSSFVCGCPAHFSLNYDNKTCSAPTSFLLFSQKTAINRMVIDEQQSPDII
LPIHNLRNVRAIDYDPLDKQLYWIDSKQNVIRRAQEDGNQSMTVVSGSLGGHSQGLQLYD
LSIDIYSRFIYWTSEVTNVINVTRIDGSRVGVVLREEHDKPRAIVVNPERGYMYFTNLME
RSAKIERAALDGTEREVLFFSGLMKPVALAIDNEVGKLFWVDSDLRRIESSDLSGANRIV
IADSNILQPVGLTVFGNHLYWIDKQQQMIERIDKTTREGRTKIQARIAYLSDIHAVHELD
MREYSKHPCTWENGGCSHICIVKGDGTTRCSCPVHLVLLPDELSCGEPPTCSPEQFSCTS
GEVDCIPQAWRCDGYAECDDGSDEEDCPVCSDSEFQCDSRQCIELSLRCNGEINCQDKSD
ENKCEVRCPADQFTCFNGQCIGKHKKCDHNMDCMDNSDETGCYPTEEPPPPPHNTIGSIV
AVVMALFVVGAIYFVCQRVLCPQMKDDGETVTNDFVVHGPSSVPLGYVPHPSSLSSSLPG
MSRGKSVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATVRSQY
TVEFGYSSNSPSTHRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGRRAPLKSSATAKGY
TSDLNYDSEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcgcgctgcggagtctgttgttgtgtagtttttgttttctcatacgaggtgag
cctctattactatatgcgaataggcgagatcttcggctcgtggatgcggcacatgagaag
gctaactccacggtggtggttggagggttggaggacgccgcagctgtggactatgtcttc
tccaagggcctcatctactggagtgatgtgagcgaggaggccatcaaacgcaccttcttc
aaccagtcgggggctagtgcattggagacggtggtatcaggtctggcctccccagatgga
ctggcgtgtgattggttagggagtaaactttactggacagactcagaaaccaatcggatt
gaagtggctgagctggacggatcgttgaggaaggttctgttctggcaggagctggaccag
ccgagagccatcgccctggatccagaacgaggcttcatgtactggactgattggggcgag
atcccaaagattgagcgggcgggcatggacgggacaaatcgctccatgatcatcgataag
gagatctactggcccaacgggttgacgctggactacagccagcagaaactgtactgggcc
gacgccaagcacagcttcatccaccgctccaacctggacggctccttcagggaggtggtg
gttaaaggtgagctgcctcacccgtttgccctcactctgtttgaggacacgctcttctgg
actgactggaccacccactccatccactcatgcagaaagcagacaggaggtggccagcgt
gttgtccactccaacatcttctctcccatggacatccacgtcttcagcaccaagagacaa
cccaccgcagtgaatactccttgctccctgaacaatggaggatgctcccacctctgcctc
ctctcacctgtcaggcctttctatcgctgtgcctgccccactggggtccaactgctggag
gacggcaagacctgcagagacggtgcgacggagatgctgctgctcgcccggcgaactgac
ctgaggcgaatctctcttgacatgccagacttcactgacatcatcctgcaggtggacaac
atccgtcacgccattgccatcgattatgacccggtggagggatacgtctactggaccgat
gacgatgtgaaggccatccgccgctcccttctggatggcagtgacgctcagttcgtggtc
acatctcaagtggaccaccctgacggcatcgccgtcgactggatcgctcggaacctctac
tggaccgacactgggactgaccgcatcgaggtgacccggctcaatggtaccatgcgcaag
atcctgatctccgaggacctggatgagcccagagccatcgttctagaccccgtggctggg
tacatgtactggaccgactggggtgatgtgccgaagatcgagcgggccgacctcgatggg
atggagagagtggtgatggtgaacacgtctttgggttggcccaacggcctcgcactcgac
tacgaagaacgcaaaatctactggggagacgccaagacggacaagatcgaggtgatgaac
atggatgggacggggcgacgggtgctggtggaggacaagcttcctcacatctttggcttc
accctgcttggagactacatctattggacagactggcagcggcgcagcatcgagtgcgtg
cacaaacgcaccgcagtgagagaattcatcatcgaccagctacccgacctcatgggcctc
aaggccacaaatgtacatgaagcttttggtacgaacccgtgtgcggatgataatggcggc
tgcagtcacctctgtctgtacaagcctcagggcgtgcaatgtggctgtcccatcggcctg
gagcttattgccgacatgaagacctgcatcgtccccgaggccttcctgctcttctctcgt
cacacagacatccgccggatctccctggagaccaacagcaacaatgttgccatcccgctc
actggtgtcaaggaggcttcagcactcgactttgacgtcaccgacaatcgcatctactgg
accgacatcactctgaagaccatcagccgggccttcatgaacggcagcgctctggagcac
gtggtggaatttggtctggattatccggaggggatggcggtggactggctgggaaagaac
ctgtactgggctgacactggcacgaaccgcattgaggtagccaaactggacgggcagcac
cggcaggttctggtctggaaggatctggacagtccccgagctctggctctggatccggcc
gaagggtacatgtactggacagagtggggggggaagccaaagatcgaccgagcggccatg
gacgggacaggacggatcacgctggtggccgatgtggggcgagccaatggactcaccatc
gactacgcagagcgccgcctgtactggaccgacctggacacaacgttgatcgagtcctcc
aacatgctgggtctcgaccgtgaggtgattgccgacgacctccctcacccgttcggtctc
acccagtatcaagactacatctattggacagactggagccagcgcagcattgagcgtgcc
aacaagaccagcgggcagaaccgcactgtcatccaaggtcacctggattacgtcatggac
atcctggtgtttcactcgtccagacagggcggctggaacgcctgtgcctccaccaacggt
cactgctcccacctctgccttgctgtccctgtcagcagcttcgtctgcggctgccccgcc
cacttctccctcaactatgacaacaagacctgcagcgctcccacatccttcctgctcttc
agccagaagacagcgatcaaccgcatggtgattgatgagcagcagagccctgacatcatc
ctgcccatccacaacctgaggaacgtccgcgccatcgactacgacccactggacaagcag
ctgtactggatcgactccaagcaaaatgtcatccgccgtgctcaggaggacgggaaccag
agcatgacagtggtgtcgggctctctgggcggacacagtcagggtctgcagctgtacgat
ctcagcatcgacatctacagccgcttcatctactggaccagcgaggtcaccaacgtcatc
aacgtcacccgcatcgatggcagtagagtcggtgtggtgctgcgggaggagcacgacaag
ccgcgggccattgtcgtcaacccggagagagggtacatgtacttcaccaatctaatggag
cgctccgcaaagatcgagcgggcggcgctggacggtacagagcgtgaggtgctcttcttc
agcggcctgatgaagcccgttgctttggccatcgataacgaggtggggaagctgttttgg
gtcgactcagacctgcggcgcatcgagagcagtgacctctcgggagccaatcgcatcgtg
attgcggactcgaacatcctgcagcccgtgggcctgactgttttcgggaaccacttgtac
tggatcgacaaacagcagcagatgatcgaacgcatcgacaagacgacgagggagggacgg
accaagatccaggcccgcatcgcctacttaagtgacatccacgcagtccacgagctcgac
atgagggagtacagtaaacatccttgtacgtgggagaacggcggctgctctcacatctgc
atcgtgaaaggagatgggacgacgcgctgctcatgtcctgttcacctggtgctgctgccc
gacgagctttcatgtggagagccgcccacctgttcgccggagcagttctcctgcacgtcg
ggcgaggtggactgcatcccacaggcctggcgctgtgatggttatgccgagtgcgacgac
ggcagcgatgaggaggactgtccggtctgctccgactcagagttccagtgcgatagccgg
cagtgcatcgaactgagccttcgctgcaatggagagatcaactgccaggacaaatctgac
gagaacaagtgtgaagttcggtgtcccgccgatcagttcacctgcttcaacggccagtgt
attgggaagcacaagaagtgcgaccacaacatggactgcatggacaactcagacgagacg
ggctgctatccaactgaggagccaccgccgcctcctcacaacaccatcggctccatcgtg
gccgtggtcatggcattgtttgtggtgggcgccatctactttgtgtgtcagagggtcctc
tgtcctcagatgaaggacgacggcgaaacggtcaccaacgacttcgtggttcacgggccg
tcgtctgtgccactgggatacgtgccgcatccgagctcactgtccagctcgctgccaggt
atgtccagggggaagtctgtgattggctccctcagtatcatgggtgggagcagcggcccg
ccctatgatcgcgctcacgtcaccggggcttcatccagcagctcatccagcacaaaggga
acgtacttcccaccgatcctgaaccctcctccgtctcctgccacggtccgctcccaatac
acagtggagttcggctactcctccaacagcccctccacgcacagatcctacagctaccgg
ccctacacctaccgccactttgcccctcccaccaccccctgcagtaccgacgtgtgcgac
agcgactacactccgggacgccgagcgccgctcaagtccagcgccaccgccaagggctac
accagcgacctcaactacgactcagagcctttcccgccaccgccgacgccccgcagccag
tacctgtctgcggaggagaactgtgagagctgcccgccgtcgccttacaccgagcgcagc
tactcccatcacctctatccgccgccaccgtcgccctgcacggactcctcatga
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integrated database retrieval system
