Maylandia zebra (zebra mbuna): 101476448
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Entry
101476448 CDS
T02814
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze02010
ABC transporters
mze04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101476448
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101476448
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mze02000
]
101476448
Transporters [BR:
mze02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
101476448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
101476448
NCBI-ProteinID:
XP_004554555
LinkDB
All DBs
Position
LG3:complement(24444246..24637494)
Genome browser
AA seq
2244 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVIEILWPLFLFFILVGVRTTTQPIYKGQCHYPNKA
MPSAGVIPWIQGMVCNLENPCLPYPTPGETPGQVNNFDNSIISGMLIELQTSLVDKSILS
RAQLLANGVDQWASILSQPNSANVILRNFLRDNETFSTHLKQDLSVPTAVAESLMNARIQ
INPMMGILRPDSLRSILCEGTDLDQYVQFRSQAEKKAFQNVSCSLTPQQLINTQQVLLQN
LDARKVLSELPAALNLNAADAATLLGKTTANALPLIEEVARLQNSTAFKAASSLNFQGDL
IGSINMFLCGKQPDSNSTNMTLGLLSPRQMANKTSISITGNSSDAFCQTLVDTLESTPGL
RYIWSTFKPLLQGKVLYTPDTPAARLLVKEANRTFNALAMLRELADSWDELGPRVWDFLQ
NSSQVNTIRALLVNPVFAGTLKAPLNGTGWTPVLLANFLYNGPPEDRPPGMPPSDWRNVY
NSTSEMLKLLSTFLRCLDLDKFEAASTEGQLVNRALDLLTNGTFWAGIVFENLQLNSSLP
PPYVKYKIRMDVDEVESTRTVRRRSWSPGARDNPYNDLRYIWGGFAYLQDMIDHGIIRAH
TSKTQPLGVFAQQMPYPCYVDDAFIRSIGSILPMFLILAFMYTVCMTIKGLVLEKELRLK
EVLRAVGVQNGALWFSVLTENIVLLVVPCALISVMVKYGKILQYSDPSVIFVFFLVFCVA
TISQCFFISVFFSKANLAAACGGLIYFVLYLPHVLCYAWRDVMGFGAKVAVSLLSCVAFG
YGCENFSKFEEQGVGIQWHNIAKSPEDGGRYTFITSIIMMLIDAVLYWVLTWYIENVFPG
QYGIPKPWYFPFTASYWRGTAPVIDDKPSLLTDSNVHNEHMEKPPPNMTTGVSIQNLVKI
YKTGKKLAVDGLSVDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDIRTD
MDSIRTYLGMCPQHNVLFNELTVEEHIYFYARLKGRSRQEVKTEMDQMIKDVGLPHKRKE
LAKNLSGGMQRKLSVAIAFVGGSKIIILDEPTAGVDPYARRGIWELLLKYKQGRTIILST
HHMDEADILGDRIAIISHGKMRCCGSSIFLKKCFGSGYYLTLVRDGSGKMTAQRNGILSQ
AKGGKKETDCPLSSSPDEGFGSQSWSNSDPSANLSAVGQLVQRHVPEAIFLESIGQEITY
ILPYGGAKDGTFGTLFRELDRAMADLGLTSYGISDTTLEEIFLKVAEDTGVDADIQPTKE
LFVRDSKRRSRGAKRNSIASVHSKTEQTTGKSEKFTSKVEDIRKSPSDSGRGSAVITGWK
LIRQQFLALFIKRFHHARRSRKGLIAQVVLPAFFVCLSLIFSLIVPPFTEFPPLELQPWM
YGLPQTTFYSNDGPGNMEVSQVVESLVNKPGFGTRCMKGDPIPNLPCSSTGSDWFTPSVD
QSVADIFLNGNWSMSNPSPGCECGTPKRTMMLPDCPPGAGGLPPPQRIQNTTDTLLNLTG
RNMTDFLVKTFEKSGKTRYGGISVGAINSQVRVTEAAITDTFRDLKGLFSSAQDNVTDQL
YQSAETLLKNLGTRDNVKVWFYNQLRHAVASFFSVANNGILRGNLPAGQDPRQYGISVTN
HPLNLSKEQLASAAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVSGV
NPAVYWLANFAWDMCNYIVPCFIVIVIFLAFQQKAYVSPPNLPALILLLIFYGWAITPMM
YPFSFIFSVPSTAYVVLTCINLFIGINSSVATFIMELFDDDNITHINNIVKQVLLIFPHF
CLGRGLIDMAKNQATATLFSNFGEDRFKNPLSWEMVGKNLCAMSIQGIVMFAVTILIQYK
FFCKPRLISGKWLPAEEEDIDVARERRRVYEGEARSDLLRICDLTKVYPRKSTPAVDRLC
VGVPAAECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRTEMRSVHQNMGYCPQ
FDALDELLTGREHVEFYARLRGVPAREVAMVAEWGVQKLGLAKYSNKSAGTYSGGNKRKL
STAIALIGCPPVIFLDEPTTGMDPKARRFLWDCILSVIREGRSVVLTSHSMEECEALCTR
MAIMVNGRFKCLGSIQHLKSRFGDGYTVIVRVGGSPPALKPVEDFVQKTFPGSVLKEKHH
NTLQYQFPHAQGALANIFSQFTRHQRRLRVEDYSVSQTTLDQVFVNFARQQHDEEDSEAY
SNPVDVSDELPLEYLRSSQGAEKV
NT seq
6735 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttcactctgctcctgtggaagaacttcactctacggaagaga
caaaaggtgcgactggtcattgaaatactgtggcctctgtttctcttcttcatactggtg
ggggtgcggaccactacgcaaccaatttacaaaggccaatgtcactaccctaataaagcc
atgccatcagctggtgtgattccctggattcagggtatggtgtgcaaccttgaaaatccc
tgtttgccttatccaactccaggagagacaccaggccaagtcaataacttcgacaactcc
ataatttctgggatgttgatagagctgcagacttccctagtggacaaatctattctcagc
agggcccagctgctagcaaatggtgttgaccagtgggcttcaattttgtcacagcctaac
tccgctaatgtcatcctgaggaattttctacgagacaatgaaactttctccacacatctg
aaacaagatttatcggtgccaacagcggtggctgaaagcctcatgaatgcccggattcag
atcaatccaatgatgggcatcctgaggccagacagcctgaggagcatcctgtgtgagggg
acagatctggatcagtatgtccaatttagaagccaagctgaaaagaaggcttttcagaat
gtcagctgctccctgactccacagcagctgattaacacccagcaagtactcctgcaaaac
ctggatgcaaggaaagtgctctctgagcttccagcagctttgaacctgaatgcagcagac
gcggcgacgctgttaggaaaaaccactgcaaatgctttaccgctgattgaggaggtggcc
aggttgcagaactccacggcctttaaggctgctagttcactgaatttccaaggcgacctg
attggcagtatcaatatgtttctgtgtggaaagcagcctgactccaattccactaatatg
accctcggtttactctcacctagacagatggctaacaagacgtcaatttccattacgggc
aacagttcagatgctttttgtcagactcttgtcgacaccctggagagcacacctggtctg
cgctacatttggagcaccttcaagccattattgcaggggaaagtcctctacacacctgat
acacctgctgctcgtctcctggtgaaagaagcaaataggacctttaacgccttggctatg
ttaagggagctggctgactcttgggatgaactcggaccgcgtgtttgggattttctgcaa
aatagctcacaagtcaatacaatacgggctctgctggtgaatcctgtgtttgctggaacc
ctcaaggcgcctctcaatggcacagggtggacacctgtgctgctggccaacttcctgtac
aacgggcctccagaagatcgtccacccggcatgccacccagcgactggcggaacgtctac
aactccacctcggaaatgctgaagcttctctccactttcttgcgttgtttggatctggac
aagtttgaggcggcctccactgaaggccaactggtgaatagagcgctggatcttttgaca
aacggtacgttctgggccgggattgtctttgaaaacctccagctgaactccagcctccca
cctccttatgtcaagtacaaaatccgcatggatgttgatgaagtagaaagtaccaggaca
gtaaggagaaggtcatggtctcccggagccagagacaacccctataacgacctgcgctat
atatggggaggcttcgcctacctgcaggatatgattgaccatggcattatacgggcgcac
acctcaaaaacccaaccactgggagtttttgcccagcaaatgccgtatccttgctatgtg
gatgacgccttcattcggagtattggaagcattctccccatgttcctgatactggccttc
atgtacaccgtgtgcatgaccatcaagggtttggtgctggagaaggaactccggctcaag
gaagtactgcgcgctgttggtgtgcaaaacggcgctctttggttttcagtgctcacggag
aacattgttctgctagtcgttccctgtgcgctcataagtgtcatggttaagtacggcaaa
atcctccaatacagcgacccctcagtgatctttgtcttcttcctggtgttctgcgtggcc
accatctctcagtgcttcttcattagcgtcttcttctctaaggccaacttagcagcggcg
tgcggtggcctcatctactttgtcctctacctgccgcacgtcctctgctacgcctggagg
gacgtgatgggtttcggggccaaggttgctgtgagtttattgtcatgtgtggcatttgga
tacggctgcgagaacttttctaaatttgaggagcaaggcgtcggtattcagtggcacaac
atcgccaagagtccagaagatgggggacgctacaccttcatcacatctatcatcatgatg
cttattgatgctgttttatactgggtgctcacttggtacattgaaaatgtctttccaggt
caatatggaatccctaagccatggtacttcccttttactgcatcttattggcgtggaacg
gcacccgtgattgatgataagcccagtttgctgacagactccaacgtacacaacgagcat
atggagaaaccgccacctaatatgacaacaggcgtgtcaatccagaatcttgtcaaaatc
tacaagactggaaagaagctcgccgtggacggactgagcgtggacttctacgagaaccag
atcacatcgtttcttggccacaatggagctggaaaaacaaccacaatgtctattctgact
ggactgtttccacctacatcgggaacggctctcatcaatggctacgacattcgcactgac
atggacagtatccggacgtacttgggaatgtgtccgcagcataatgtcttattcaatgag
ctgacagtggaagagcacatttacttctacgcccggctcaaaggacgcagtcgccaagag
gttaaaactgagatggatcagatgattaaggacgtcggtttgccacacaaacggaaagaa
cttgccaagaacctgtcgggtggcatgcagagaaagctgtccgtggccatcgcgtttgtg
ggtggctcgaaaatcatcatcttagatgaacctacagcaggagtggacccctatgcccgc
aggggtatctgggaactgctgttaaagtacaaacaaggccgcaccatcattctgtccacg
caccacatggacgaggcagacatcttaggtgatcgcattgccatcatctcccacggcaag
atgcgttgctgcggctcctccatcttcctgaagaaatgcttcggcagcggctactacctc
actctggtcagagacgggagcggaaagatgacagctcagcgtaacggcatcctcagtcag
gccaaaggggggaagaaagagacagactgtcctttgagcagcagcccagatgaaggattt
ggcagccaaagctggagcaactctgatccatcagcaaatttgtcagcagtgggtcagctc
gtgcaaagacacgtccctgaggcaatcttcctggaaagcatcggtcaggagatcacctac
atcctgccctacggaggagctaaagatgggacctttggcacgctcttccgagagctcgac
cgagccatggccgaccttggcctcaccagctatggcatctcggacaccaccctggaggag
atattccttaaagtggcggaagacactggagtggatgcagatatacaaccgacaaaggag
ctgtttgtgagagacagcaaaagaaggtcccgcggagccaaaaggaacagcattgccagc
gtccactcaaaaactgagcaaaccaccgggaagagtgaaaagttcacaagtaaagttgaa
gacataaggaagagccccagtgacagcgggaggggatccgcggtcatcaccggatggaag
ctgatcagacagcagttcctggcgctctttattaagcgcttccaccacgcccgaaggagc
cgcaaaggactcattgcccaggtggtcttgcctgctttttttgtctgcctgtctctgatc
ttctccctcatcgtcccgccgttcaccgaatttccacccctggagctgcagccctggatg
tatggcctgcctcaaaccaccttctatagcaacgatgggccaggaaatatggaggtgtcc
caggtggtggaaagcttggtgaacaagcctggctttgggacacgctgcatgaaaggagac
cctataccgaatctaccttgttcctccacggggtctgattggttcactccctccgtggat
cagtcagtcgctgacatctttctgaatggaaactggagcatgtctaacccctcccccggc
tgcgagtgcggcactcctaaacggacaatgatgttgcccgactgcccgcccggcgcgggc
ggccttcctccgccacagaggatacagaacacgacagacaccttgctgaatttaaccgga
cggaatatgacggacttcctggtcaagacttttgagaagtctggtaaaacaaggtacgga
gggatctccgtcggagcaatcaactctcaagttcgtgtgacggaggcagcaatcacggat
acattcagagatctaaaaggcctattcagttcagctcaggataacgtgactgatcagctc
taccaaagcgctgagacgctgctcaagaacctgggaaccagggacaacgtcaaggtgtgg
ttctacaaccagctgcggcacgccgtggcgtccttctttagcgtggccaacaacggcatc
ctgagaggaaatctgccagcgggacaggacccgcgccagtacggcatctccgtcaccaat
caccccctcaacctcagcaaagagcagctcgccagtgcggccatggccacaacctccact
gacgtcgtggtgtccatctgcgttatctttgccatgtccttcatccctgccagctttgtc
ctcttcctaatccaagagagggtgaacaaagccaagcatctgcaatttgtcagtggagta
aacccagctgtctactggttggccaattttgcctgggacatgtgtaactacatcgtcccc
tgcttcatcgtgattgtgatcttcctcgccttccaacaaaaagcctatgtttcccctcct
aacctgccggctttgatcctcttgcttattttttatggctgggctatcacgcccatgatg
tacccgttctccttcatcttcagcgtgcccagcacagcttacgtggtgctgacctgcatc
aacctcttcattggtattaacagcagcgtggccacctttatcatggagctcttcgatgat
gataatatcacccacatcaacaacatagtgaagcaggtgctgctgatattcccacacttc
tgtctgggcagagggctgattgacatggccaagaaccaggcaacggccacactcttcagc
aactttggggaggaccgtttcaagaacccgctgagctgggaaatggtgggcaagaacctt
tgtgccatgtccatccagggaattgtcatgtttgccgttacaatcctcatccagtataaa
ttcttctgcaaaccaagacttatttcagggaagtggctgcctgcggaggaagaggatatc
gatgttgccagggaacgaaggcgggtgtatgaaggcgaagcccggagcgaccttctgagg
atctgtgacctcactaaggtataccctcggaagagcacccccgctgtggacaggctatgt
gtgggcgttcctgccgcagagtgtttcggcttgctgggaatcaacggagctggaaaaacc
accacgttcaagatgctgacaggagacatcccagtctccagtggagaggccttcctaaat
ggatacagcatccgaactgagatgaggtccgtgcaccagaacatgggctattgcccccag
tttgatgctctcgatgagctgctgactggacgagagcatgtggaattttacgcccggcta
cgaggggtaccggcaagagaggtcgccatggtggctgagtggggggtccagaagttgggg
ctagccaaatattccaacaaatcagcaggaacctacagcggcgggaacaagcgcaaactt
tctacagcgatagccctgatcggctgtcctccagtgatttttctggatgagccgaccacc
gggatggaccccaaagcccgacgcttcctgtgggactgcatcctgagcgtcatcagagag
ggacgctcagtcgttctcacgtcacacagcatggaggagtgtgaagcgttgtgcacacgc
atggccatcatggtaaatggtcgcttcaagtgcctcgggagcatccagcatctgaagagc
agatttggtgatggctacactgtgattgtgagggtcggtggctctccgcccgcactgaag
ccagtcgaggacttcgtccagaagacctttccgggcagcgttctcaaagagaagcatcac
aacacgctgcagtatcagttcccacacgcacagggagctttggccaatatcttcagccag
ttcaccaggcatcagcggaggctgcgtgtggaggactactcggtgtcccagacaactttg
gatcaggtctttgtgaattttgcgaggcagcagcacgatgaagaggactctgaggcctat
agcaacccggtggatgtttcagacgagctgccgttggagtatctgaggagctcccaagga
gcagaaaaggtgtaa
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integrated database retrieval system
