Maylandia zebra (zebra mbuna): 101476485
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Entry
101476485 CDS
T02814
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mze03021
]
101476485 (chd1)
03036 Chromosome and associated proteins [BR:
mze03036
]
101476485 (chd1)
Transcription machinery [BR:
mze03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
101476485 (chd1)
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
101476485 (chd1)
SLIK complex
101476485 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
101476485
NCBI-ProteinID:
XP_004564635
LinkDB
All DBs
Position
LG7:complement(57329252..57353332)
Genome browser
AA seq
1791 aa
AA seq
DB search
MAGRSEDESVSNSSGESSNSDDESGSGSGSASGSGSGSSSSSSSSSSQSGSSDSGSGSDS
GSQSDSDIEKSKEKIEPPNKSNIDGAEFWKSNPSILAVQRSAMLRRQQLQQQQQQQRQSS
SNSGSDEDSSSSDESDSSSGSKMRRKSGSSDSGSGSESGSGSGSDSSAEESETASDYEPS
HKIKSRKPPTKMNFRNGKKSNTQRKKAQKSSSSDDEDDNFKKITSGGPRRQATVNISYKE
DEELKTDSDDLVEVMGEDVPQPEEDEFETLERVMDSRIGRKKATGSSTTVYAIEADGDPN
ANFDPNKEAGDIQYLIKWKNWAHIHNTWETEETLKLQNVKGMKKLDNFKKKDQEKKKWLK
AASPEDIEYFNCQEELMDDLRSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWE
DGCLIAKKFQKCIDDYMSRNQSKTIPFRDCKVLKQRPRFVPMKKQPAYIGGDGLELRDYQ
LDSLNWMAHSWCKSNSCILADEMGLGKTIQTICFLNYQFNEHQLYGPFLLVVPLSTLTSW
QREIQLWAPQMNVVVYLGDISSRNMIRTHEWMHSHSKRLKFNILLTTYEILLKDKSFLGS
VNWAFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKF
HSWELFEDEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQY
YKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEDNEFLNRAEALQHLIR
SSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLRSRQFLFQRLDGSIKGEMRKQ
ALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKR
QVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSAPFNKEEL
SAILKFGAEELFKEQEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFS
MMEDEEIDIDSERSQRSWDDIIPEEQRRRMEEEERQKELEEIYMLPRMRNCAKQIYQNAN
EGRQSRNRRYSGSDSDSTSDRKRPKKRGRPRTIPRENIKGFSDAEIRRFVKSYKKFGGPL
ERLDAIARDAELVDKSEHDLKRLAETVHNGCLRTLRENPSGPEKNSGGRRGKVKGPTFRI
SGVQVNAKLVISHEEELAPLHKAIPADPEERKKYVIPCHSKAAHFDIEWGKEDDSSLLIG
IYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQK
QAGNASSRKRKPRSKKSKTQKSTKTDEMVKSPSSDLPSDKRSDDEDEMETDKDLAPMKLP
NRRSRADRLVVKEEDDEEDDEEENYDEECEQEASSSGEQEVKEREIKKEIKKEKKEESFE
IKDTKELKEKKETKPLEVVHKQEESKEKNEAKNEVRERTKKTYDTPVHITASGENVQAAE
DSEELDQRTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKE
YSNPDLIKQWRKNLWIFVSKFTEFDARKLHKLYKHAVKKRQENAQALEQNTRSINTHGYR
HADIERLKDSSHQDESSRDSYSSDRHQPSGRHFESSTSKERHSSDSHRKSTAGESRKRPY
SSFSNGKDHRDHYRPDSRDRDKQDRYYDDSKHRKLEEFRSSRDHRLDMKDHHSDHRSSYR
YHSEWQTEQRGSASGQRSPYDSRSPLGHRSPFDYSSDHKSTPEQIWSSRKT
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgcagtgaggatgaaagtgtaagcaacagcagtggagaatccagtaattct
gatgatgaatccggttctggatcgggttcagcttcaggatccggctcaggctcgagttcc
agctcttccagcagcagcagccaatcagggagcagtgactcaggaagtggctcagactct
ggcagccaatccgattctgacatagaaaagtcaaaggagaagatcgaaccaccaaataag
tcaaacattgatggagctgagttctggaagtcgaacccaagtatcctagcagtgcaaaga
tctgctatgctcaggagacagcagcttcagcagcagcaacaacaacagagacaaagctca
tcaaatagtggatcggatgaggactcttcaagtagtgatgaatcggactcctccagtgga
tccaaaatgagaagaaaatctggttcttctgactctggatcaggttcagaatctggtagt
ggttctgggtcagactcatcagcagaagagtctgaaacagcatcagactatgagccaagt
cacaaaatcaaaagcaggaagcctccaaccaagatgaactttcgaaatggaaaaaaaagc
aacacccagagaaaaaaagcccagaaaagttcatcatctgacgatgaggatgataacttt
aagaaaattacatctggagggccacggcggcaagccacggtcaacattagctataaggag
gacgaggagctgaagactgactcagatgatctggttgaagttatgggtgaagatgttcca
cagcctgaagaagatgagtttgaaacactggagagagtaatggacagcaggatagggagg
aaaaaagcaacgggcagttcaacaactgtatacgctatcgaggcagatggagatccaaat
gcaaattttgatcccaacaaagaagctggtgatatccagtatttgataaagtggaagaac
tgggcccatatccataacacctgggagactgaggagacactcaagttacagaatgtcaag
ggcatgaagaaattggacaattttaagaagaaggaccaggagaagaaaaaatggttgaag
gcagcatctccagaggatattgaatatttcaattgtcaggaagaattaatggatgacctg
cgttctcagtaccagcttgtagagcgaataataggacattcaaaccagaagtcagcagct
ggttatccagactacctgtgcaaatggcagggcttaccatactctgagtgtagttgggaa
gatggttgtctgattgctaaaaaattccagaaatgcatcgatgattacatgagcagaaac
caatctaagaccattccattcagagactgcaaggtgctgaaacagagacctagatttgtg
cccatgaagaagcaaccagcttacataggaggtgatggtttggagctcagagactaccag
ttagacagcttgaactggatggcccactcctggtgcaaaagcaacagttgcatccttgct
gatgagatggggttagggaagacgatccagaccatctgcttcctgaactaccagtttaat
gagcaccaactgtatgggcccttcctgctggttgtgcctctttcaacactaacatcttgg
cagagagaaatccagctgtgggcccctcaaatgaatgttgtggtctacctgggagacatc
agcagcaggaatatgatcagaacacatgagtggatgcattctcacagcaagagactgaaa
tttaacatcctccttacaacatatgagattctcctcaaagacaagtcatttttgggcagt
gttaattgggccttcattggtgtggatgaggcgcacagactgaaaaatgatgactccctc
ctctacaagacaatgatcgacttcaagtccaatcacaggcttctgataacgggaacacca
ctgcaaaattccctgaaagagctctggtccctgctgcacttcattatgcctgaaaagttt
cattcgtgggagctgtttgaggatgaacatggcaaaggtagagactctggctacaccagt
cttcacaaagagctggaaccttttctactgcgccgtgtcaagaaggatgtggagaaatct
cttccagctaaagtggagcagattctcagagtggaaatgagtgccattcagaaacagtat
tacaagtggatcctaacaaggaactacaaggctctgagtaaaggtaccaaaggcagcacg
tcaggtttcctcaacatcatgatggagttgaagaagtgctgtaatcactgttaccttatt
aaacctccagaggacaatgagttccttaacagagctgaagctttacagcatctgatccgc
agcagtggaaagctggttctcttggacaaactgttggtgcgtttgaaagaacggggacac
agagttctcatcttctcccagatggtacgaatgcttgatatcctggctgaatatctgagg
agcagacagttcctgtttcagcgattagatggctccatcaaaggggagatgaggaagcaa
gcattggaccactttaatgcagagggttcagaggatttctgcttcttgttatctacacgt
gctggaggtctgggcatcaatctggcttcagctgacacagtggtcatctttgactcggac
tggaacccccaaaatgacctgcaggcgcaagccagagcccacaggattggacagaaaaga
caggtgaatatctaccgactggtaacaaagggttcagtggaggaggacatcattgagagg
gcaaagaagaaaatggtactagaccatcttgttattcagaggatggatacgactgggaaa
actgtactccacacaggatctgctccgtccagttcagcaccattcaacaaggaggagctc
tctgcaatcctgaagtttggggctgaggagcttttcaaagaacaagagggggaggagcaa
gagcctcaggaaatggacattgatgagatcctcaaaagagctgagaccagggaaaatgac
cccggaccttcaacagttggagaagaactgttgtctcagtttaaggtggccaacttctcc
atgatggaggatgaggaaatagacatcgactctgagcgaagtcagcggagttgggatgat
atcattccagaggagcaaaggaggagaatggaagaggaggaaagacagaaagagctggaa
gaaatctatatgctaccacgcatgaggaattgtgccaaacagatttatcagaatgcaaat
gagggccggcaaagtagaaacaggagatactctggttccgacagtgactccacatctgat
cgaaagaggccaaagaaacgagggcggcccagaaccattccaagggaaaatatcaaaggt
tttagtgatgctgagatccggaggtttgtcaagagttacaaaaaatttggaggaccactg
gaaaggttggacgcgattgctcgtgatgctgaactcgtggataagtctgagcatgaccta
aaacgcttggcagagactgttcacaatggatgtttgagaacactacgagaaaacccctct
gggccagagaaaaattcagggggcagaagagggaaggtgaaaggccctacgttcaggatc
tctggagtccaggtgaatgcaaagcttgtgatctcgcatgaggaagagctggctccactg
cacaaggctattcctgctgacccagaggagagaaagaagtatgtcattccatgtcactca
aaggcagcacattttgacattgagtgggggaaggaagacgactccagcctcctcatagga
atctacgagtatggttatggcagctgggagatgattaagatggacccagaccttaatctc
acacacaagctcctgccagatgaccctgacaagaaaccacaagccaaacagttacagacc
agagcagactacctcatcaagttactgagcaaggacttggccaaaaaagaagcacagaaa
caagcaggaaatgccagctcacgaaagaggaaacccagaagtaaaaagagcaaaactcaa
aagtcaacaaagacagatgagatggttaagagcccatcctcagatctcccatcagacaag
aggtcagatgatgaggatgaaatggagacagacaaggatctggcacctatgaagctacca
aaccgacgaagccgagcagacaggttggtggttaaagaggaggatgacgaggaagatgac
gaggaagagaactatgatgaggaatgcgagcaggaagcttcctcatcaggggagcaggaa
gtcaaagagagggagataaaaaaagaaatcaaaaaggagaagaaggaggaaagctttgag
attaaggacacaaaggagctaaaagagaaaaaagaaacaaaacctcttgaggttgtacat
aaacaagaggaaagcaaagaaaagaatgaagccaaaaatgaggtacgagaacggacaaag
aaaacttatgacacgccggtccacataacggctagtggagagaatgtgcaagcagctgaa
gattctgaggaactggatcagaggacctttagtgtgtgtaaagagaggatgcgcccagta
aaagcagctctgaagcagctggacagaccggagaaagggctgtcggagcgcgagcagctc
gaacacacacggcagtgcctcataaagataggagaccacataaccgagtgtttgaaggag
tattcaaatccggacctgatcaaacagtggagaaaaaacttgtggatatttgtttccaaa
ttcactgagtttgatgcaagaaaactacacaaactttataagcatgcagtaaagaaaagg
caagagaatgcccaggcattggagcagaacactagaagtataaacacccatggctacaga
catgcagatattgaaaggctgaaggacagctctcaccaggacgagagcagcagggacagc
tacagctctgacaggcatcagccttcaggaagacactttgagagcagcaccagtaaggag
agacacagctctgactcccacaggaaatccacagctggagagtcccgaaaaagaccgtat
tcctctttcagcaatggaaaagaccacagagaccactacagaccagacagcagggataga
gacaaacaggacagatactatgacgacagcaagcacaggaagttagaggaattccgcagt
agccgagaccaccggctggacatgaaggatcatcactcagaccaccgctcttcctaccgc
taccactcagaatggcagacagagcagcgaggctcagccagtgggcagcgctcaccctac
gactcccggtcaccactggggcaccgctcaccttttgactactcatcagaccacaagagc
acaccagagcagatttggagcagccgcaaaacataa
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integrated database retrieval system
