Maylandia zebra (zebra mbuna): 101476540
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Entry
101476540 CDS
T02814
Symbol
npas3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mze03000
]
101476540 (npas3)
Transcription factors [BR:
mze03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101476540 (npas3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
101476540
NCBI-ProteinID:
XP_004554721
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Position
LG19:complement(2799620..3173543)
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AA seq
1065 aa
AA seq
DB search
MIRIFPDFSVQVTASAAGGTGAGGGGGGGGMVTGPPVGRVPVPVPGATNGTPQSVQGITA
YQQSDPYWERPANAGSCSAARPKTLHLAGQQHTSSPWLQALRKEKSRDAARSRRGKENFE
FYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPPNTSVKAI
GTQRRRSPSAIASEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELT
GSSVFDYIHPGDHVEMAEQLGMKLPPGRGMSLSQGAVNEDGASSASSSSHSETPEPVESS
SPSLLAPDNSLERSFFIRMKSTLTKRGVHIKSSGYKVIHVTGRLRIRMALTHSRSVPNQI
MGMVAVAHALPPPTINEVRIDCQMFVTRVNMDLKIVYCENRISDYMDLTPVDIVGKRCYQ
FIHAEDVEGIRQSHLDLMNKGQSVTKYYRWIQKNGGYIWIQSSATIAINVKNASEKNIIW
VNYVLSNPEYKDTPMDIAQLPNLPEKASESSETSDSESESKENSDNENTKAEEKPGHQTE
HSEDPETDSKRQQQPGQSHCSSEQEMKRQEEGDSSSNPESQDSDDSLEPSDGEGEEQEEA
GRGGGGGGGGRLGRLAGLGGLGSLGAIGGLGNLGGLHIKVEHYGEGEDVQLRSSQTSSSE
EEGEEEEEDEEDDEDDNGCVQDCDSVNAGSKLQKRRKRRKVQKWDGSRSRRLRLSSTTPS
PIAIGDTTPLVDPSQATTATSTHLLASSGSPNSANAASSVLKIKTEMAEPINFDNDSSIW
NYPPNREISRNESPYSMTSKPSAPGSHETFPSPQGGSLQVAIPDSVLTPPGTEGGAGGVR
KPPYNGSSAPSSASSAVSLAPPSSASSADPLSPPLSASPRDKQQGTPTTSSSSSSSSSSS
TSSSSLLYSGDLEALQRLQAGNVVLPLVHRVTGTLASTSTTAPRVYTTGTIRYAPADVTL
AMAQGNLLPNAAMNFVDGSGFGLDPKTPMEMLYHHVHRLNMSAAAAAGPFVGSPTATGGN
GALGGQMPTTANVFTTAEGLFSTLPFPVYSNGIHTTQTTLERKED
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagcgtccaggtgacggcttcggcggccggaggaacc
ggagctggaggaggaggcggcggaggggggatggtgaccggacccccggtgggtcgggtg
cccgtgccggtacccggagccacgaacgggaccccgcagagcgtgcagggaatcaccgcc
taccaacaaagtgacccctactgggagcggccagctaatgcaggcagctgctccgccgcc
cggcccaagacccttcacctggccggccagcagcatacctcctcaccatggctgcaggct
ctgaggaaggagaagtcacgggacgcggcaaggtcgcgtcggggaaaagagaactttgag
ttttatgaactggccaagatgctgccactgccaggtgccatcaccagccagctggacaag
gcctccatcatccggctcaccatcagctatctgaagatgagggatttcgccaaccaggga
gacccaccgtggaacctgcgaattgagggacctccgcccaacacctcggtcaaagctatc
ggtacccagcggaggagaagtcccagcgccattgcctctgagatcttcgaacctcaccta
ggaagccacattttacagtctctggatgggtttgtatttgcactaaacaaagaggggcgc
ttcctctacatctctgagacggtttccatctacctgggattgtcacaggtggagctcact
ggtagcagtgtgtttgactacatccaccctggcgatcatgtggagatggcagagcagctt
gggatgaaacttcctccaggccgagggatgtctctatcccagggagcagtcaacgaagac
ggggcttcttcggcttcttcatcgtcacactctgagacgcccgaaccagtcgaatccagc
agtcccagtcttctggctcctgataactccctggaacggtccttcttcatccggatgaaa
tctacactcacaaagagaggcgtgcacatcaagtcctcaggatataaggtgatccacgtc
acagggcgcctgcggatcaggatggctctgacgcacagccgctcagtgcccaatcagatc
atggggatggtggcggtggctcacgctctcccgccgccaacaatcaacgaggttcgcatc
gactgccaaatgttcgtgacccgagtcaacatggacctaaagattgtctactgtgagaac
agaatcagtgactacatggacctgactccagtggacattgtggggaagaggtgctaccag
tttattcatgctgaagatgtggaggggatcagacagagtcaccttgacttgatgaataaa
ggccagagtgtgacaaagtattaccggtggatccagaagaatggtggttacatctggatc
cagtccagtgccaccatcgctatcaatgtgaaaaacgccagcgagaagaacatcatctgg
gtcaactacgttctcagtaatccagagtataaagacacacccatggacattgcccagctg
ccaaacctgcctgagaaagcttcagagtcctctgaaacttcagactctgagtccgagtcc
aaagaaaactcagacaacgagaacaccaaggcagaggagaagcccggccaccaaacagaa
cacagtgaggacccagagacagacagcaaacgtcagcagcaacccggccagtcacactgt
tcatctgaacaagaaatgaagcgccaagaagaaggagatagctcaagtaaccctgagagc
caggacagtgatgacagtctggaaccttcagatggagagggtgaggagcaagaagaggct
ggcagaggagggggagggggaggtggaggcaggttgggaaggttagcagggcttggagga
ttagggagtctgggtgccatcggtggactgggtaacctaggtgggcttcatattaaagta
gagcactacggagaaggggaagacgtacagctgcgtagctcccaaacgtcttcatcagaa
gaggaaggagaagaagaagaggaggatgaagaagatgacgaggatgacaatgggtgcgtg
caagattgtgacagtgtcaatgctggtagcaagctgcagaaaaggcgaaagaggaggaaa
gtgcagaaatgggatggctcacgaagcaggaggcttcgtctgtcttcaactacacccagt
cccatagcaataggcgataccactccgctagtcgacccctcccaagccacaaccgcaacc
tccacccatctcttagcctcatctggctccccaaacagtgcaaatgcagcatcctcagtt
ctgaagattaagacagagatggcagaaccaataaactttgacaatgacagcagcatctgg
aactaccctcccaacagggaaatttccagaaacgagtctccatacagcatgacctccaag
ccatctgctccagggagccatgagaccttcccctcaccacagggaggatctctccaggta
gccattcctgactctgtcctcacccctcctggaactgagggaggagcaggaggagtgagg
aaacccccttacaatggaagctcagccccatcctctgcctccagcgctgtaagcttagct
cctccttccagcgcctcctctgccgaccccctatctcctcccctttctgcatccccacgg
gacaagcaacaaggcactcccaccacctcttcttcctcatcttcttcttcatcctcctca
acctcttcttcttcactactgtactctggggaccttgaagcacttcagcgcctgcaagct
ggtaacgtggtgcttccgctggtccacagagtcacaggtactctggcctccaccagcacg
acagctccacgggtctacaccactgggaccatcaggtatgcgccagcggacgtaactctg
gctatggcacaaggcaacctcctccctaatgctgccatgaactttgttgacggctcaggg
ttcggcctggaccctaagacacccatggagatgctctaccatcatgtccacaggctcaac
atgtctgctgcggcagctgctggcccctttgtcggatctcctactgccacaggtgggaac
ggtgcccttggaggtcagatgccaacaacagccaatgttttcaccacagcagagggactg
ttctcaacgctaccattcccagtgtacagcaacgggatccataccacgcagacaacactg
gagaggaaggaggattag
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integrated database retrieval system
