Maylandia zebra (zebra mbuna): 101476588
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Entry
101476588 CDS
T02814
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101476588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101476588
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101476588
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101476588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
Motif
Other DBs
NCBI-GeneID:
101476588
NCBI-ProteinID:
XP_004569823
UniProt:
A0A3P9AZS2
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Position
LG22:complement(4255918..4299785)
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AA seq
918 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANTNQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEEVGTWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKKFIERHRYHI
RMLETILRMLDNDSVQVEAIRKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPQSLVA
TSPPGHSHLEDEIFQQSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSP
VKNGNPSSSLSSSSSSSASSSVSGLTSSSMISMATIAGGGSSSSGGNSHHSNSAGHLTNT
SAGSYSNATQQPPHPSAQQQQAKNSVSSSSSSSAPISNSSTSTNSHPASLAASPPNASTQ
ELRASNSQPQAPSGSTPTSNSLGLSLGLSLGKGISGAITTSPMSGGLGLSGMPASLTGTM
AGLLSSNTPAPYAQAVGSSLPGSLGGVSTATTNSAVGSIGSGNMTVGGPTSSTGLLGAAP
GVVGSGILGLGSSQSGVQGSSLVSPSSVGGLAPGSGVGVIGSNGGSSGSAGSGVVGGNSL
PVRPPSRQKQNGSTSYSAVVADNTADSALNSASQSQSSQPSSLTSTANQPKDTGPSLLGS
MSLSSNSPSPASYSEAKTVSGSNLLNGPMSYSQQSSDSIKPQEPLSSLKSMAERAAMSSG
IEGDVTSLHLTSEIFPSSTTAPSGPPSGPQPSLSEVSIPPSLGVCPLGPVPLSKDQGYQQ
VMQEQAWTHMPHPSDSERIRQYLMRNPCPTLPFHHQVPPPHSDTVEFYQRLSTETLFFIF
YYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQR
KKEGFTFEYRYLEDRDLQ
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaactccaaggtgaaatagatcgatgtctgaaaaaagtagcggag
ggagtggagcagtttgaggatatttggcaaaagcttcacaatgcagccaacacaaaccag
aaggagaaatatgaagcagacctcaagaaagagattaaaaagctacagcgtcttcgagac
cagatcaagacgtgggtggcatcaaacgagatcaaagacaaaaggcagctagtagaaaac
cgcaaactcatagaaacgcaaatggagcgattcaaggtagtggaaagagaaaccaagaca
aaagcatactctaaagaagggctcggtctggcacagaaggtggacccagcccagagggag
aaggaggaggtcggcacgtggctaacgaatacgatagacactctgaacatgcaggtggac
cagtttgagagcgaagtggagtctctctcagtccagacgagaaaaaagaaaggagacaag
gagaagcaggaccggatcgaggagctgaagaaattcattgagaggcatcggtaccacatc
cggatgctggagacgatactgaggatgctggacaacgactctgtgcaggtggaagccatc
aggaagatcaaggatgacgtagagtattatatcgactcgtcgcaggatcccgactttgag
gagaacgaattcctttacgacgatctggatttggaggacattcctcagtcgctggtcgcc
acttcaccgccggggcactcgcacttggaggacgagatcttccagcagtccagcagcaca
cccacctccaccacctcatcttcacccatccccccgtcgcctgctacttgcactacagag
aactcagaagatgataagaagaggggacgttcgacggacagtgaagttagtcagtcgcct
gtgaagaatggaaatccctcctcttcgttatcctcttcttcctcctcctctgcttcttct
tccgtctcgggactgacctcatcttcaatgatctctatggcgaccatcgctgggggagga
agcagtagctctgggggcaacagtcatcacagcaactcagcaggtcatctcaccaacact
tccgctggcagctacagcaacgccacccagcagccgccgcacccgtcagcgcagcagcaa
caggccaaaaactccgttagctcctcttcctcctcctcagctcctatctccaactccagc
acctccaccaacagccaccctgcctcactggccgcctctccacccaatgccagcacacag
gagctccgtgcttcaaattcgcagccgcaggctccatcagggtccacgccaacctccaac
agcctgggccttagcctgggcctctctttggggaaaggcatttcgggcgccatcaccacc
agccccatgtccggaggcctcggcctgtcggggatgccggcatccctgacgggcaccatg
gcaggccttctgtccagtaacacccctgcaccctacgctcaggcggtcggctccagctta
ccaggctctttgggtggagtcagcacagcaacgaccaacagtgctgtaggctccatcggc
agcgggaacatgacagtcggcgggccgacatcctcgacaggtctgctgggtgcagcgccg
ggcgtggttggctctgggattctgggtttgggctctagtcagtcaggggtgcagggctca
tccttggtgtcaccgagctcggtgggaggtttagccccaggtagcggagtaggagtcatc
gggagcaacggcggcagctcgggatcagcagggagtggagtagtaggaggaaattcgctc
cctgtccgaccaccgagccgacagaagcagaacggtagcactagttacagtgctgtggta
gcagacaacacagcagactccgccctcaacagtgccagccaatcgcaaagcagccaaccc
tcatctttgacctctacagccaatcagcctaaggacactggtcccagtctactgggctct
atgagtttgtcatccaactctccatccccggcctcttacagcgaggccaaaacggtgagc
ggcagcaacctgttgaatgggccaatgtcctactcacagcagtcctccgacagcatcaag
ccccaagagcctctgagcagcctcaagtccatggccgagcgagcagcaatgagctcaggg
atcgagggagatgtgacctccctgcacctcacctcagaaatattccccagcagcactacg
gccccttcaggccccccatcaggacctcagccctcgctgtcagaagtcagcatcccccca
tcgttgggggtgtgtccgctgggcccggttcccctgtccaaagaccagggctaccaacag
gtcatgcaggagcaggcgtggacgcatatgccacacccatccgactccgagagaatcagg
cagtacctgatgagaaacccctgccccaccctgcctttccaccaccaggtgccaccgccc
cactcagacactgtagagttttaccagaggctttccacagagaccctcttcttcatcttt
tactacctggagggcactaaggcccagtatctggcagccaaagccctgaagaagcagtcg
tggaggttccacacaaagtacatgatgtggtttcagaggcacgaagaacccaagaccatc
actgatgagtttgagcagggaacatacatttactttgactatgagaaatggggccagcgg
aagaaggagggcttcacgtttgagtaccggtacctcgaagaccgagacctccagtga
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