Maylandia zebra (zebra mbuna): 101476640
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Entry
101476640 CDS
T02814
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101476640 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101476640 (gspt1)
03012 Translation factors [BR:
mze03012
]
101476640 (gspt1)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101476640 (gspt1)
Translation factors [BR:
mze03012
]
Eukaryotic type
Release factors
101476640 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
101476640
NCBI-ProteinID:
XP_004557678
UniProt:
A0A3P9BHL8
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Position
LG8:5820627..5831465
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AA seq
587 aa
AA seq
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MDTRDTAPDSWELEEDAEAPAAAAGLPTAFAALNVNAKPFVPNVNAPVFVPSFLQASAVE
MPASDGTPDPAASMEVSETVAPVENGSTEADMPTEEETWEQKEEPGGDEGGGGQEDLGSG
ETCAEEGGAAGKEDEEMMEEEEEEMLLPKVAPAPPDAPKKEHVNVVFIGHVDAGKSTIGG
QIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKK
HFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGV
KHLIVLINKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDP
VSECPWYTGLPFIAHLDSLPNFTRSSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQL
VMMPNRHTVEVLSLLSDDVETDDASPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRT
FDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQV
CIARLRAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggacacgagagacacagccccggattcgtgggagctggaagaggatgccgaggcccct
gctgccgcggcgggactcccaaccgccttcgccgcccttaacgtcaacgccaagccgttt
gtccccaacgttaacgccccggtgtttgtaccaagcttccttcaagccagcgctgtggaa
atgccggcttcagatggtacccctgatccagctgccagtatggaggtgtcagaaacagtc
gctccagtggagaatggaagcacagaggcagacatgcccacagaggaagagacgtgggag
cagaaggaggagcccgggggagacgaaggaggtggcggacaggaggatctggggtctggg
gagacctgcgcggaggagggaggcgcagcagggaaagaggacgaggagatgatggaggag
gaagaggaggagatgctcctgcccaaagtggctccggcgccaccagacgctcctaagaaa
gaacacgttaacgtggtcttcattggtcatgttgatgccgggaaatcgacgatcggagga
cagatcatgtacttaactggaatggtggacaaacgaaccctggagaaatatgaaagagaa
gcgaaagaaaaaaacagggagacatggtacctgtcgtgggctctggatacaaatcaggag
gagagagacaaagggaagacggtcgaggttggaagagcttacttcgagacggagaaaaaa
cacttcaccatcctcgatgcccccggacacaagagctttgtccccaacatgatcggtggg
gcgtcacaagctgacctagcagtcctggtgatttcggcaagaaagggcgagtttgagacg
ggattcgaaaagggtgggcagacgcgggagcatgccatgctggctaaaacggcaggagtt
aaacatctcattgtcctcatcaacaagatggatgaccccactgtcaactggagcctagaa
aggtatgaggagtgtaaggagaagctggtgccatttctaaagaaggtgggcttcaaccct
aagaaggacatccactttatgccttgctctggactcacaggtgccaacctcaaggaccct
gtatccgaatgcccctggtacacgggtttgccatttattgcccacctggacagtttgcca
aacttcaccagatcaagcgacgggcctgtcagactacctatcgtagacaaatacaaggat
atgggtactgttatccttggaaagctggaatctggatccattagtaaagcccagcagctg
gtcatgatgccaaacaggcacacggtggaggttttgagcctgctgagtgacgatgtggag
acggacgacgcaagtcctggggagaacctgaagttgcggctgaagggcatagaggaggaa
gagatccttcctggttttatcctctgcagccccgacaacctctgccactctgggcgcacc
tttgatgcgcagatcgtcatcatcgagcacaaatccatcatttgtcctggttacaatgca
gtccttcacatccacacctgcatcgaagaagtgcaaattacagccttaatctgtctggtg
gacaagaagacgggagagaaaagcaaaacacgaccacgctttgtgaagcaggaccaggtt
tgtatcgccaggctccgggcagcaggagtcatctgcttagagaccttcaaagacttccct
cagatggggcgattcacactgagagacgaaggcaaaacaatcgccattggcaaagtgctg
aagctggtgccagaaaaggactaa
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