Maylandia zebra (zebra mbuna): 101476700
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Entry
101476700 CDS
T02814
Symbol
vps13a
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mze04131
]
101476700 (vps13a)
Membrane trafficking [BR:
mze04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
101476700 (vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
DUF4770
Motif
Other DBs
NCBI-GeneID:
101476700
NCBI-ProteinID:
XP_012773473
LinkDB
All DBs
Position
LG12:18959018..19005844
Genome browser
AA seq
3294 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDSSQLKLGIWGGDAVLNNLEIKENALSQLDIPFKVKAG
HIGRLQLKIPWKNLYTQSVEATLDGVYLLIVPTASIKYDAEKEEKQFQEARQRELQRIEQ
TKLKAAEQENPKLEKQDTFTEKLVTQVIKNLQVKISNIHVRYEDHVTNPNCPLSFGVSLK
NLSLQTADAKWRPSLLDEKSKFFFKLVQLDNLFAYWNVNSVLFSSHTSDRALQHLQSSME
VHSSHDFIFRPISADAKLRMNPRSDVDFSSPKVDLMVNLREVAIELNKAQYISILELLCS
VDMMSRNLPYRKYRPEVHVHKNAKTWWKYVITGVLEIDVKPGLHMWSWQHIRRHRQMVKS
YRELYKTKITSKKPSDEVLKDLEKPEKTLDIFNITLARQQAEVEASKAGLRIYRPGMKME
EEESQGWISWMWNWGAQPDTERKEVKTGGFDELLTPAEKAKLYTAIGYSETAANPNLPKD
FENMKVNFHMEKLSVSINDDKDKNEIIRLTVGELYSTLTQRPGAQAIKITAKLTLFEVTG
LTNKQPPPILLSSRKAAIGAGTPLLCILFETNPLDESANQRLHVESQPLEIIYDAITVNS
ISAFFRPPDDMQLDELTNATLMKLEQFRDRTATGLLYVIETQKVLDLKVNLMASYVIIPQ
TGFYNGTQNILLLDLGHFKMSSQSRKHLPQLCVSSSNIEDIMSRAYDSFDVQLESLQFLY
SKPDGNWKKARKQKQSPLHILEPVDLKVVFSRAMINKDSRMPKYKMSGELPLLSLRISDV
KLRSVLELVDSIPLPESKPATRGNAPSSTPKPRQSFTPHLTPRKPLNFDQRSSLIFESCE
TISITSLGSEEDLFYDAPSSPIGEKPFFPDNPMPLRYVDASKRKSLIKEDAQKNMTDFFM
TFEISEFSVQLCRLSGSMEVTVLHLDIEGLGTELKLRTFDMTSNTYLREICLKCPEYMDS
EDKQVQLITTLDNKEVDLLTLEYIKADKNGPDFKSQYNNTEQLIKVTFSSLDVHLHTEAL
LNTMNFLSKLLPESNKKEGQQEELPTIPEEDDAEAEKEEEKKEETAVTKKKPSKRSKFAD
VVNLHIKTDLRCLKVFIRGQKARISEISIEGLVSEVLMRKKGMEVSAKLKNIVILDCNKE
AFYKKAVSIADKEVFHFHMVNYTDATEGDAYLDMSNVDTTVTLSVGCIQVIFLNKFLSSI
LEFVNNFQEAKEALTEVTVQAAEKAASGVKELAERTTRIALDVHFNAPIIFLPQSSSSSN
GIVADLGLLSIKNRFAKQPCKSDASIPPVVDIMTVRLTDLKMFRAKFKNERFEEEIQLLK
PVSLDLEIRRNLSSSWYHEIPDIDIGVHLKPMSLLLCQNDMIIVLRTLNENLSEKSDAGP
PPAALPATDPSSDSVSNKDSQESGTTGPPSSNTVVTAAVVETQKNSKLRKNTLKLNFKFD
SLTVVLYSSNEDKQLEPQRELSGPHHDQSHPQHEPSDPHDEQLKLAEFTLGTISTSVHMY
SDSSMKASVQLAECLLDDKRPKAKSITPRMMAMCPGAEQNNMVEVSYRQTREGTTLDTVV
QDVYLCASMEFLLTVADIFLKATQQGFAQVPQPKNSTGAGDKKNINSSVTSKESATATAT
VTKTEMNVVVRNPEIVFVADLTRDDAPALVMTTYCELVMKNGGEGSRTTAVIKDLKVVAC
PFLRQKRRNNVTTVLQPCQVYFESTQSPTSPQAMEVTINALSLKVSPVIINTVITIQSAL
TPTAETPEKLDSPVAVNLWDKQSWKELKLWFLEEDDDEDTKLVTCLIPQGESLKVNIRSI
CVTLEAGVGHRTIPMLLAKSSFKGDVENWSTLINLYSQLTLEVHYYNEVMGVWEPLLEPL
EDETRDGFRPWVLKLKMKKKPVKYTEMSDEVDSNIPDYKTVIVIDSKDQLNITLSKCGLA
MLSNLGTAFAEAAKQTAECFQKDEAPFVVKNRLGLPVSVRHSEMFCPVGQQSIANTVKLQ
NGESLGMDYSTTTDTDHFSAMTSLSGKDYYIQPTPDGHTSASVIPLIKVGRGMYSVMHNN
SGVTRFLVCQISSVEGSKYIKIRSPFQLINHFSIPFNVFEGPTLLGTALPAEEFCVPLDS
YRSELSLQPVIESTDDSQGEQYDCSEGFSYEDVNNLEPEKRLQQICRRRGNQGGVMTINI
VPLKDAVTCKETGDVGENFDVPFVLHLWPSILLRNLLPYTITYSLKNSGISAPEATLDPG
HSAQLHTGVINQSSLDLRLIEYLAQDWSSVYRLNSDQEEITFIVFKSLREDADEDGDAVE
RKRAELDIAVHVKYDLGQMVVAIHSPYWMINKTDRLLQYKADDIHRKHPMDYKMPLLFSF
KPRYFLRNNKVRLMISESELSDEFSLDTVGSHGDVKCKGRFKDYLVGVKIDASSFSLTRI
VTFVPFYMLVNRTKHSVFICEDGQETWTEAKPEESAIPFWPESDTKKLKIKVEASLSPPV
TIDFKRPENCLLLHLDNKAGGIIVDMNLSEHSATIQFSDYHDGAAPFLIINHTKNQTLQF
HQSVRTESSWVADEILDLSFSVEEDSSQKKAEHEELEAGKAVYYTWTEPTGSRALSWKCS
TYSGTLKSEEDLREDVNKEGKLFVISFYEGLQRVVLFTEERRVFKMLCDNEKVQVAQQEI
ILTLRHVGLSLVNNSTNQEVAFIGITSSDVVWEFKPKKKSRWKPLTIKEAEIMEDKFKDY
QESGAVDKAIFDLENGFQVFFNPTGQDMQIMKPCDAPLRRHFLPGVKVEYSISPRQSAYR
IQVHRIQIQNQLPGAIFPYVFYPVKLPKSVAMETEPKPLTDISIVTRAAGHSDISRIKYF
VVLIQEMDLKLDLGFLYAILELFSLENDSITSAEQEVELFEKDIMNIKTELNHVSAADKS
PISLYEYFHISPIKLHLSFSLSTGGEDGLKQKRDSELIPVQSLNLLLKSIGATLTDVQDV
VFKLAFFELTYQFYTTQQLQWEVLRHYSKQAIKQMYVLVLGLDVLGNPFGLIRGLSEGVE
DFFYEPYQGAIQGPEEFVEGMALGVKALVGGAVGGIAGAASRITGAMAKGVAAMTMDEEY
QQKRREAMNKQPSGLREGLTRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKG
LVGAVARPTGSIIDMASSTFQGIKRAAETSQDVQSLRPPRFIHEDGVIRPYKELEGLGSQ
MLQKIENGRFASYRYFAHAKVNESDFLMITKRGIFFVTKGTFGQLTCEWQYLFEEFTKDP
TIIEDRRLRIEAKERVKLVFHAKEFGKIINFKTPEIAKWVLTKLEDARESLPKY
NT seq
9885 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcgaaagcgtggttgtagatgtcctcaaccgatttttaggggactacgttgtc
aaccttgacagctcgcagctaaagctcggcatatggggaggtgatgctgtgcttaataat
cttgaaataaaggaaaatgccttgagccaacttgatattccttttaaagtgaaggctggt
catatagggcgtctccaactgaagataccatggaagaacctatacacacaatccgtggag
gccacgttggatggtgtctacctgcttatagttcccacagcaagcataaagtatgatgca
gaaaaggaggagaagcagtttcaggaggctcgccagagggaactacagcggatagagcag
acaaagctgaaggctgctgagcaagagaatcccaagcttgagaaacaggacacttttacg
gaaaagcttgtcactcaggtcattaaaaacctgcaagtcaagatctctaacatccacgtg
cgctatgaagatcatgtaacaaatccaaactgccctttgtcatttggagtgtcactgaaa
aacctcagccttcagacagctgacgcgaagtggagacccagtcttttagatgagaagtcc
aagtttttcttcaagctggtacaactagataacctgtttgcctactggaatgttaactca
gtacttttctccagtcacacttcagatcgggccctgcaacatctccagagcagcatggag
gtccactcctctcacgacttcatttttcgccccatttcagctgatgcaaaactgcggatg
aatcccaggtcagatgtggatttctcctcccctaaagtggacctgatggtcaatctcaga
gaggtggcaattgaactcaacaaagcccagtacattagcatcttggagctgctgtgctca
gtggatatgatgtcacgtaatctgccatacaggaagtacagacccgaggtccatgttcac
aagaacgccaaaacatggtggaagtatgtgatcacaggcgtcttggagatagatgtgaag
ccaggtctccacatgtggtcatggcaacacattcgccgacaccggcagatggtaaaaagc
tacagagagctctacaagacaaagatcaccagcaagaaacccagcgatgaggttctcaaa
gacttagagaagcccgagaagactttggatatttttaacatcactttggccagacagcag
gctgaagtggaggcaagtaaagcaggcctgcgtatttaccgtcctgggatgaagatggag
gaagaagagtctcagggttggatcagctggatgtggaactggggggcacagcctgataca
gaaagaaaagaagttaagactggagggtttgatgagctgttaacccctgctgagaaagcc
aaactctacactgccattggatacagcgagactgctgctaatcccaacctgccaaaggat
tttgagaacatgaaggtcaacttccacatggagaaactgtccgtgtcaattaatgatgac
aaggacaaaaacgagatcatcaggctgactgtgggagagctgtactccacactcacacag
agacctggagcacaagccatcaaaatcacagccaagcttactttgtttgaggtcactggc
ctcaccaataagcaacctccaccaattctcctttcatcaaggaaggcagccataggagca
gggaccccactgctttgtatcctgtttgagaccaaccccctggacgagagcgctaaccag
cggcttcacgtagaatcacaacccttggaaatcatctatgatgctataactgtgaacagc
atatcagcgttcttcaggcctcctgatgacatgcagctggatgagctcacgaatgcaacc
ctgatgaaactggagcagtttagagaccgcacagccactggtttactgtatgtgattgaa
acacagaaggttctcgacctgaaggtgaacttgatggcctcctacgtgatcattccacag
accggtttttacaatggcactcagaacatcttgctgttggatcttggtcatttcaagatg
tccagtcaaagcaggaaacatctacctcagctgtgtgtgagttccagcaacattgaggac
atcatgtccagagcttacgatagctttgatgtacaacttgaaagcctacagtttctttat
agcaaaccagatggtaactggaaaaaggcccgcaaacagaaacagtcacccctccacatc
ctagagccagtggatctaaaggtggtttttagcagggcaatgatcaacaaagactcccgc
atgccaaaatataagatgtctggagagcttcctctgttgtctcttcgtatttctgatgta
aaacttcgaagtgttctggagctggtggacagtatcccgctgcctgaaagcaaacctgct
acacgtggcaatgctccatcatcaactccaaagcctaggcagtctttcacccctcatctc
actcccagaaaacctctgaactttgatcaacgctcttctctcatttttgagtcatgtgag
accatcagcatcacctcattagggtcagaggaggatctgttctatgatgcgcccagctct
cccatcggggagaaaccattttttccagacaatcccatgccgctgcgctatgtcgatgca
agcaaaagaaaaagtctcatcaaggaagacgcacaaaagaacatgactgacttctttatg
acatttgagatcagtgagttttctgttcagctctgtcgtttgtctggaagtatggaggtt
acggtgctccacttagatatagagggtctgggcactgagctgaagctgcgcacctttgac
atgacgtctaatacctacttgcgagagatctgcctcaagtgtcctgaatacatggattct
gaagacaagcaagtacagctgatcactacactggacaacaaagaagtcgacctgctcact
ctggagtatatcaaagctgacaagaatggtcccgacttcaagtctcaatataataacact
gagcagctcatcaaggtgaccttttcatcactggatgttcacctccatacggaggctctc
ctcaataccatgaacttcctcagtaagctccttcctgaatctaataagaaggaaggacag
caggaggagcttcccactatccctgaggaagacgatgctgaagcagagaaggaggaagag
aaaaaggaggaaactgctgtaaccaagaaaaaaccttcaaaaaggtcaaaatttgcagat
gtggttaatctgcatatcaaaactgatctccgctgccttaaagttttcattcgaggacag
aaggccaggatctcagagatcagtattgaaggtctggtttccgaggtcctgatgaggaag
aaggggatggaggtttcggccaaattgaagaacattgtgattctggactgtaacaaagaa
gctttttacaaaaaggctgtgtccatagcagataaggaagtgtttcacttccacatggta
aactatacagatgcgactgaaggagatgcctatctggacatgtctaacgttgacactact
gttacactaagtgtgggctgcattcaggtcatcttcctcaacaagtttctctcatctata
ctggagtttgtcaataacttccaggaggctaaagaggcactaactgaggtaacagttcag
gctgcagaaaaagcagcatcaggcgtgaaagaactggctgaacggaccactcggatcgct
cttgatgtccacttcaatgcacccatcatcttcctcccccagtcctcctcttcatcaaat
ggcattgtagctgaccttggtctgctttctatcaaaaatcgttttgccaagcaaccctgt
aaatcagatgccagcatcccacctgttgtggatataatgactgtgagactgactgacctt
aagatgttcagagccaaatttaaaaatgaacgttttgaagaagagatccaactgctgaag
ccagtgagcctagacttggaaatccgtagaaatctatcttccagctggtaccacgaaata
cctgacatagatattggggtccatctaaagcccatgagtctgctcctatgccagaatgac
atgatcattgtcctgaggactctgaacgagaacctgtcagagaagtctgatgctggtcca
cctccagctgctctgcctgccactgacccgtcctctgactctgtatccaacaaagactcc
caggagtctggcaccactggaccacccagcagtaacacagtggtgacagctgctgttgta
gagacacagaaaaacagcaagctgagaaagaacacactgaaactaaacttcaagtttgac
tcactgactgtggttctgtacagctccaatgaggataagcagttagaaccacaacgtgag
ctgtcaggcccacatcatgaccagtcacacccacaacatgagccgtcagacccacatgat
gagcagctgaagctagcagaatttactctgggcaccatctccacctctgtccacatgtac
tccgacagctccatgaaggcctcagtacaacttgctgaatgccttctagacgacaagagg
ccaaaagccaaaagtatcaccccaaggatgatggcaatgtgtcctggtgcagaacagaac
aacatggtggaagtgagctatcgtcaaacccgtgaaggcaccactttagatacagtggtg
caggatgtgtatctatgtgccagcatggaatttctgctcacggtggccgatatcttcctt
aaggccacccagcagggttttgcccaagtgccacaacccaagaacagtactggtgctggc
gataagaagaacattaactcatcggtcacatctaaagagtctgctacagctacagccacg
gtaacaaagactgaaatgaatgttgtggtgcgaaacccagagattgtatttgtagctgac
ctgactcgtgatgacgccccagctctggtgatgaccacatattgtgaactagtaatgaaa
aatggtggtgaaggatcacggacgactgctgttatcaaggacctcaaggttgttgcctgt
ccattcttaagacaaaagaggagaaacaatgtgactacagtgcttcagccatgtcaggtg
tacttcgaaagtactcagtctccaacctcccctcaggctatggaggtcaccatcaacgct
ctctcacttaaggtatctccagtcataatcaacaccgtgattactatccagtcagcactc
actccaacagcagagacccctgagaagctggacagccctgttgctgtgaacctgtgggat
aagcagagttggaaggagctcaaactctggttcctagaagaagatgacgatgaagacacc
aaattagtgacctgcttaataccacagggagagtccctaaaggtgaacatcagatcaatc
tgtgtgactctggaggctggagtgggacatcgcaccatccccatgcttctggcaaagtcc
tccttcaagggagatgtggagaactggtccacgctcattaacttatacagtcagcttacc
ctagaggttcactattataatgaagtgatgggagtgtgggagccactgctggagccctta
gaagatgagacaagagatggtttcagaccatgggtgctgaaactgaagatgaaaaagaaa
cctgtgaagtacacagaaatgtcagatgaagtggattccaatatcccagactacaagaca
gtcattgtcatcgacagtaaagatcagctcaacatcacactttccaaatgtggactggct
atgctgagtaacctgggcactgcatttgctgaagctgccaaacagacagcagagtgtttt
caaaaggatgaagctccatttgtagtcaaaaaccgtcttggcctaccagtttctgtgcgc
cacagtgagatgttttgtcctgttggacagcagagtatcgctaacactgtgaagctgcag
aatggcgaatccctcggaatggactattcaaccacaacagacactgatcatttctcagca
atgacctctttgagtggaaaagactattacatacagcctactccagatggtcacacctca
gccagtgtgatccctttgatcaaagtgggccgtggaatgtacagtgtaatgcacaacaac
tcaggagtcactcgtttcctggtctgtcagatttcctctgtagaaggcagcaagtacatc
aagatccgctctcctttccagctcatcaatcatttctcaataccattcaacgtttttgaa
ggaccaacccttctgggtactgccctccctgccgaggagttctgtgtgcctctggactcg
tataggtctgagctgagccttcagccagtaatagagagcacagatgatagtcagggtgag
cagtatgattgctcagaaggcttcagttacgaggacgttaacaacctggagcctgagaaa
cgcctacagcaaatctgccgtcgccgtggaaaccaaggtggtgtgatgaccatcaacatt
gtgccattaaaagatgcagtgacgtgcaaggagaccggagatgttggggagaattttgac
gtgcccttcgtgcttcacttgtggccttccatcctgctacgcaaccttctgccttacacc
atcacctacagtctaaagaacagtggaatctctgcacctgaggctactttggaccctggt
cactctgctcagcttcacactggagtcatcaaccagtcaagtcttgatcttcgcttgatt
gagtacttggctcaggattggtcttctgtatatagactcaacagtgatcaggaagagatc
accttcattgtgttcaagtctctaagagaggatgcagacgaagatggagatgcagtggag
aggaagagggctgagctggatatagcagttcatgttaaatatgatctggggcagatggtg
gttgctatccattcaccgtactggatgataaataagacggacaggttgttgcagtacaag
gctgatgacattcaccgcaaacatcccatggactacaagatgccgttgctcttttcattc
aagcctcggtacttcttgcgaaacaataaggttcgtcttatgatctcagaaagtgaacta
tctgatgaattctctctggacacagttgggagccacggggatgtgaaatgcaaaggcaga
ttcaaagattatctggtcggtgtgaagatcgatgcaagcagtttcagtctgacccgcatt
gtgacctttgtgcccttctacatgctggtcaacagaactaagcacagtgtgttcatatgc
gaagacgggcaagaaacttggactgaggcaaaaccagaagagtcagccatccctttctgg
cctgagagtgacactaagaagcttaaaattaaagtagaagcttccttatcgcctccagtg
actatcgacttcaaacgaccagagaactgcttattgctacatctggacaacaaagcgggt
gggattatagtagacatgaatctgtcggaacactcggccactattcaattttctgactac
catgatggcgcagcccctttcctcatcatcaaccacactaaaaatcagactcttcagttc
catcagagtgtccggacagaatcctcgtgggtggctgacgagatacttgacctctccttc
tcagtggaggaggacagctctcagaaaaaggcggagcatgaggagctggaggctgggaaa
gctgtgtactacacctggactgagcccactgggtcacgagcgctctcctggaaatgcagc
acttactctgggacactaaagagtgaagaggacctgcgagaggacgtaaacaaggagggc
aaactttttgtgatttctttttatgaaggtctccagcgtgttgtgctgttcactgaggag
cgacgggtcttcaagatgctctgtgacaatgagaaggtgcaggttgctcaacaggaaatc
atcctgacactacggcatgtgggcctatcgctggtgaacaacagcaccaaccaagaggtt
gccttcattgggatcacaagctctgatgttgtgtgggaattcaaacctaagaagaagagt
cgatggaagcctctgaccattaaagaagctgaaattatggaggacaagttcaaagactac
caggaatctggggccgtagacaaggcaattttcgatctggaaaacggctttcaggtgttc
tttaatcccactggccaggacatgcagataatgaagccatgtgatgctcctcttaggagg
cacttcttgccgggtgtgaaggtggagtacagcatttcaccacgacagagcgcctatcgt
atccaagttcaccggatacagatccagaatcagctacctggggccatcttcccttacgtt
ttttaccccgtgaaactgccaaagtctgtcgccatggagacagaacccaaacctctaact
gatatcagcattgttacccgagcagcggggcactctgacatctcacgcatcaagtacttt
gtggttttaattcaggagatggatctaaaacttgatctgggtttcctgtacgccatcctg
gagctgttctccctagagaacgacagcataacgagcgcagaacaggaggtggaactgttt
gaaaaggacataatgaacataaagacagaactgaaccatgtctctgctgctgacaaatct
cccatcagcctctacgagtacttccacatttcccccattaagctgcacctgagtttctct
ctgagcacaggcggagaggatggcttgaagcagaagagagattcggaactgatccctgtg
cagtcgctaaatctgttgctaaagagtatcggcgcgacgctcactgatgtgcaggatgtt
gtcttcaagctggccttttttgaattgacctaccagttctacaccactcagcagctccag
tgggaggtcctcagacattattctaagcaggctattaagcagatgtatgtgctggtgctg
ggcctcgatgttcttggaaacccatttggactgatcagaggattgtcagaaggggtggag
gatttcttttatgagccctatcagggagccatccagggccctgaggagtttgttgaagga
atggctcttggggttaaggcgctggtgggaggagctgtaggcggtattgcaggtgcagcc
tccaggataacaggtgccatggcaaagggtgtcgcagcgatgacaatggatgaagagtac
cagcagaagagacgagaagctatgaacaaacagcccagcggtctgagagaggggctgacc
aggggtggaaaaggactggtgtctggatttgtcagtgggatcacagggatcgttaccaaa
cctattaaaggggcccagaaagagggggcagcgggcttttttaaaggtgttggaaaaggt
ttggttggtgcagtagctcgaccaacaggaagtattattgacatggccagcagcactttc
caagggatcaagagggcagcagagacttcacaagatgttcagtctctacgtcctcctcgc
ttcatccacgaggatggtgtcatacgaccatataaggagctggaaggcctcggcagtcag
atgcttcagaaaattgagaatggacgttttgccagctacaggtactttgctcatgctaaa
gtcaatgaatctgactttctcatgatcaccaagaggggaatattttttgtgaccaaaggc
acttttggtcagctgacctgtgagtggcagtatctgtttgaagagttcaccaaggatcca
accattatagaggaccgccgacttcgcattgaggccaaggagagagtgaagttagtcttt
catgccaaagagtttggaaagataataaacttcaaaactccagagatagccaaatgggtt
ctcaccaaattggaggatgcaagagagagtttacccaagtactga
DBGET
integrated database retrieval system
