Maylandia zebra (zebra mbuna): 101476906
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Entry
101476906 CDS
T02814
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101476906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101476906
04121 Ubiquitin system [BR:
mze04121
]
101476906
03036 Chromosome and associated proteins [BR:
mze03036
]
101476906
03400 DNA repair and recombination proteins [BR:
mze03400
]
101476906
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
101476906
Ubiquitin system [BR:
mze04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
101476906
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
101476906
DNA repair and recombination proteins [BR:
mze03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
101476906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
zf-RING_6
Ank_2
Ank_4
Ank_3
Ank_5
BRCT
BRCT_2
Ank_KRIT1
zf-RING_5
PTCB-BRCT
ANK_LRRK2
zf-C3HC4_3
zf-RING_10
zf-C3HC4_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
101476906
NCBI-ProteinID:
XP_004555570
LinkDB
All DBs
Position
LG16:21659959..21683713
Genome browser
AA seq
813 aa
AA seq
DB search
MDEHSSVQTVDWKKTKEAAANFRRLLLCSKCSDLMKEPVCLGLCEHMLCRSCAGPRAGDG
CVVCHSPAWVKDIQINRQLSSIIELFCGLESLLTPIKNPDSSVAEIQPDGPVPKNNKKNF
KIWFSPRSRKVRCTVEKAAEITVLDNRSPGETSAAQQDTLTAQCQDLSVFNFTSSSQDSG
SSSSQRCNGETKNDRKKRSTKKNATSRNVPVQGATRTTRKQTKQNLKKKRLEAINQQWGI
SEEAHLSENEQVCADGARRSSKRVSFLSPVVTSDGPQPEMAQRSTDKLSPARSTVRESLS
QGSETVLNCQTELVQPLPESAFQHDQLSADVPKPNDNPKNHKNVSPSEHSSKRSRTKDRN
STLDNTPKRPRPSPGRRGRKSLSPISPVVLNPPSLTTPKSTKKSRKEGRDSPSVQASPST
ESYRRSSCFNGASVGRSSPGSPAVMKRNHKGETLLHLAAIKGDVEAVKDLLDQGADPNLK
DNAGWTPLHEACNLGHLAVVELLVSMGALLNTPGYENDSPLHDAVRNGHSSIVKLLLQLG
ASQNVLNLYGKRPADYAASLEMLEIFQEASEGTQYANARISHSPSASLSVVNDCVRREQT
IVLLSSKLSPAERHQLVKLGQLLGGRMADTFSGSVSHIVVPEGQMPTTYSTLMGLLAGCW
IVRYKWVEACLQVGKWVPEAEHEAGEGPQRSRINRCSLLPPLFDGCFFFLLGSFKTPTKD
ELTKLLREGGAQLLNRQPKPDSDVTQTVNATAYHALPGSDQALCTHYIIYDPQAPHKPSV
VRRGKVWSAPTTWVINCITAFSLLPVPDPELLV
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcacagttccgtgcaaacagtggactggaagaagactaaggaggcggcggca
aacttccgacggttgctactttgttccaaatgttcagatttgatgaaggaacctgtttgc
ttaggtttatgtgagcatatgctgtgcaggtcctgtgctgggccacgtgcaggagatggc
tgtgtggtatgtcacagccctgcctgggtgaaggacatccaaatcaacaggcagctcagc
agcatcatagaactcttctgtggcttagagtccctgctcactcctattaaaaatccagac
tcatctgtggctgagattcagcctgatggccctgtacctaaaaacaacaagaagaatttt
aaaatctggttcagtccccgcagccgcaaggtacgctgcacagtcgaaaaggctgcagag
atcaccgtactggacaacaggtctcctggagaaacatctgcagcacagcaagacaccctc
actgctcaatgccaggacctgtcagttttcaatttcacctcgtcctcccaagactccggc
tcctcttcttctcaaagatgcaacggtgaaacaaaaaacgacaggaagaagaggtcaact
aagaaaaatgctaccagcaggaatgtgccggtgcaaggagccaccagaaccacacgaaaa
cagacgaagcaaaatctgaagaagaaaaggttggaagccataaaccagcaatggggcatc
tcagaagaggctcatctctctgaaaatgagcaggtgtgtgctgatggagcaagaaggtcc
agtaaaagggtttcattcctaagccctgttgtcacttctgatgggcctcagcctgagatg
gcacagcggagcactgataaactcagtcctgccaggagcacagtgagagagagtctctca
caaggcagcgagactgtactgaattgccaaactgaacttgttcaacccttgccggaaagt
gcctttcagcatgaccagctgtctgcagatgtacccaaaccaaatgataaccccaaaaat
cacaagaacgtgtctccttccgagcattcctcaaaaagatctaggaccaaagacagaaac
agcactttggacaacactccaaaaagaccaagaccttctccaggcagaagggggagaaaa
tcattgagtccgatctctccagttgtgctaaatcctccatctctgactacccctaagagc
accaaaaagtccagaaaagagggcagagacagcccctctgttcaagccagcccctccaca
gaaagttacaggagatcttcctgttttaatggtgcatctgttggacggtccagtccagga
agccctgcagttatgaagaggaaccacaagggagagaccctgcttcatctagctgcaatc
aagggagatgtagaggctgtcaaggatcttctggatcagggggctgaccccaatctaaaa
gataatgcggggtggacacctctgcatgaagcatgtaacctgggtcatctggcagttgtg
gaactactggtctcaatgggagccctcttgaacacgcctgggtatgagaacgactcccca
ctacacgatgctgtcaggaatggacattcatctattgtaaagctactattgcagcttggc
gcctcacagaacgtattaaatctgtatggaaagcggcctgcagattatgcagcgagtctg
gagatgctggagattttccaagaagcctcagaaggaactcaatatgcaaatgctcgtata
tctcatagcccctcagccagtctctccgtggtaaatgactgtgtgaggagggaacaaacc
atagtgcttttgtccagcaagctctcgccagctgaacggcatcaactggtcaaactggga
cagctactgggagggaggatggctgacacattttctggctcagtgagtcacattgtggta
ccggaagggcaaatgcccaccacctactccaccctcatgggtcttcttgctggctgctgg
attgttagatacaaatgggtggaggcatgtctccaggtggggaaatgggtgcctgaagct
gagcatgaagcaggagaaggcccccagcgaagtcgcatcaacagatgcagcttgcttcca
ccactgttcgatggatgtttcttcttccttcttggctcttttaagacgcctaccaaagat
gagctcacaaaactactccgggagggaggagctcagctactgaaccggcaacccaagcca
gacagtgatgtgactcaaactgtgaatgccacagcctatcatgccctgccagggtccgac
caggccctttgcacacattacatcatctatgaccctcaagcccctcacaagccgtcagta
gtgagacgaggcaaggtgtggtcagctcccaccacctgggtcatcaattgcatcactgcc
ttcagccttctccctgtaccagaccctgaactattggtctaa
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