Maylandia zebra (zebra mbuna): 101477098
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Entry
101477098 CDS
T02814
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03440
Homologous recombination
mze03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101477098 (top3a)
03460 Fanconi anemia pathway
101477098 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mze03032
]
101477098 (top3a)
03400 DNA repair and recombination proteins [BR:
mze03400
]
101477098 (top3a)
Enzymes [BR:
mze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
101477098 (top3a)
DNA replication proteins [BR:
mze03032
]
Eukaryotic type
DNA Topoisomerases
101477098 (top3a)
DNA repair and recombination proteins [BR:
mze03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
101477098 (top3a)
FA (Fanconi anemia) pathway
101477098 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
101477098
NCBI-ProteinID:
XP_004575542
UniProt:
A0A3P9B4D0
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MLVACLLRRSVLLSGLRRPGVQRRYFCAAQSVLQDTLQQEADMIRSRGQIRRVLCVAEKN
DAAKGISEIMSSGRARRREGMSKFNKIYEYEYHLFGQNVTVSMTSVSGHLLGLEFKAPFQ
KWHSCNPVLLFDAEVEKYCPDNMLQIKRTLEKEVRLCQALVIWTDCDREGENIGFEIIDV
CKAVKPNLQVFRAKFSEITPNSIRRACETLTEPDANVSDAVDVRQELDLRIGASFTRFQT
LRLQKIFPESLANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVIHEVEEDCVEF
NWKRNRLFNHTACLVLYQICMEDPIATVTSVTSKPKSKWRPLPLDTVELEKLASRKLRIS
AKETMKIAEKLYTQGFISYPRTETNIFPANLALTPLVEQQAHSPVWGAFAQRVLDQPGGP
NPRQGKNSDQAHPPIHPTKFTNTLQGNEGRVYEFIVRHFLACVSQDALGQETVVDIDIAQ
EKFSVSGLMIIARNYLDVYPYDRWSTKVIPVYEQGSQFQPSAIEMVDGQTSPPQLLTEAD
LISLMEKHGIGTDATHADHIETIKSRMYVGLTADQRFTPGELGMGLVEGYNSMGYEMSKP
NLRAELEADLKLVSEGRKDKQSVLQHHIQKYKTVFIESVRKAKKLDEALSPYLGAAHEIP
EAEQQDMEIPLPVRKCPNCGRDMVLKKKREGNSKYLSCVGFPACKTAVWFPDVVLEVSRD
ESTCPTCQPHPIHMLKFKFRRGSLPPMMPLEFVGCIGGCDEILREVLDLKYLRPGGGGGG
AGVGGGGGRGDDPHPPPPRPPRPDPSRTRISNPRHSLPPVPSWTPQPTSPPGGRSMSINA
SSDAIVCNCGQDALLLTVRKDGPNQGRQFYKCNAGSCNFFLWADQPSQQGAPQNRGLPPP
APRTSQPPRPSLGFRNTSEGSRGQEAGAPGHLEQVMCNCNEAAVTRTVQKDCPNKGRMFH
TCGKPREQQCGFFQWADENVPPPGGFGGGFYSDGDGGRKGRKMMGGPSANRPPAAKKPRT
CGICHMPGHTRVTCPQR
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgctagtagcgtgtctcctcaggagatctgtgcttttatcgggactacggcggccggga
gtccagcggaggtatttctgtgcggcgcagagtgtcctccaggacacattgcagcaggag
gcagacatgatccgaagccgggggcagatccgtcgggtcctctgcgtggccgagaaaaat
gatgctgctaaggggatctctgaaattatgtccagcggcagggccaggaggagggaagga
atgtcgaagtttaataaaatctatgagtatgaatatcatctctttgggcaaaatgtgact
gtctcaatgacatcagtatcagggcatttactgggtctggagtttaaagctccatttcag
aaatggcacagctgcaatccggtgctgctgtttgatgcagaagtagagaaatattgtccg
gataatatgttacagattaagcgaacgctagagaaggaggtgaggctgtgccaggccttg
gtcatctggactgattgtgatagagagggagaaaacattggcttcgaaatcatagatgtt
tgcaaagcagtgaagccaaatttacaagtctttcgggcaaagttttctgagatcacgccc
aactcaatccgaagagcctgtgagactctaacagagcctgatgctaacgtcagcgatgca
gttgatgtccgccaggagctggacttgcgtataggtgcatcttttactcgattccagaca
cttcgcctgcagaagatcttcccagagtccctggccaatcagctgatctcatacggcagc
tgtcagtttcccactctgggttttgtggtggagcgcttcaaagccatccaggcattcata
cccgagactttctataagatcaaagtgatccacgaggtggaggaggattgtgtggagttt
aactggaaacgaaaccgcctcttcaatcacacagcttgtctagtgctctaccagatctgc
atggaggatcccatagcaacagtcacctcagtaaccagcaaacctaagagtaaatggagg
ccactgcctttggacactgtggaactggagaaactggcttcacggaagctcagaataagt
gccaaagagaccatgaaaattgcagaaaagctttatactcaggggttcatcagctatccc
cgcacagagaccaacatttttccagcaaacttggctcttaccccactggtggagcagcag
gctcacagcccggtgtggggggcattcgcccagcgagtgcttgaccagccggggggaccc
aacccaagacagggcaagaactctgaccaagcccaccctcccatacatcccaccaagttc
actaacacactgcagggcaatgaaggacgtgtgtatgagttcattgttcgccatttctta
gcttgtgtatcccaggatgctttgggacaggagactgtggttgatatagatatcgctcag
gagaagttctccgtctcgggactcatgatcattgcaaggaactacctggatgtttacccc
tatgacaggtggagcacaaaggtgattccagtgtatgaacaaggctctcagttccagccc
tctgctattgagatggtggatggacagacgagtcctccgcagctgctcactgaagccgac
ctcatatcgctgatggagaagcacggcattggtacagatgcaacccacgctgatcacatt
gagactataaagagtcgcatgtatgtgggcttgacagctgaccagaggtttacgcctgga
gagctgggcatggggctggtggagggttataactccatgggctatgagatgtcaaaaccg
aacctgcgtgctgaattggaagcagacctcaagctggtgtcagaaggccgaaaggacaaa
cagagcgtgctgcagcatcacatccagaaatacaagaccgtcttcattgagtctgtcagg
aaagcgaagaagttagatgaagcgctgtctccctatctcggtgcagctcacgagatccct
gaagcagagcagcaggacatggagatcccgctgccggtgaggaagtgccctaactgtggt
cgggacatggtgctgaagaagaagagagagggaaacagtaaatacctgtcgtgtgtgggc
ttcccagcctgtaaaacagcagtgtggtttcccgacgtggtgctcgaggtcagcagagat
gaaagcacatgtcctacctgtcagccacaccccattcatatgttgaagttcaagttccgc
aggggtagccttcctcccatgatgcctctggagtttgtcggctgcatcggtggctgtgac
gagatcctccgagaagtgctggacctgaaatatctcagaccagggggaggtggtggtggt
gcaggagttggaggagggggtggaagaggagatgaccctcatcctccacctccaaggcca
cccagacctgatccgtccagaacccgaatctctaatcctcgccattctctcccgcctgtg
ccctcctggaccccacagccgacgtctccaccaggtggccgcagtatgagtataaacgcc
agcagtgacgcgatcgtgtgcaactgtggtcaggatgcactcctcctgactgtgcgcaaa
gacggccctaatcaaggccggcagttttacaagtgcaacgccgggagctgcaacttcttt
ctttgggcagatcaaccaagtcagcagggggcgccacagaatcgagggctgccaccgcca
gcaccaaggacttcccagcctcctaggccatctctgggattcagaaacacatctgaagga
agcagagggcaggaagcgggtgcaccaggacatttggaacaggtgatgtgcaactgcaac
gaggcagccgtgacgcgaacggtgcagaaggactgtccaaacaagggtcgcatgttccac
acctgtgggaagccaagagagcagcagtgtggcttctttcagtgggctgatgagaacgta
cctccaccaggtggttttggtggtggattttatagtgatggagacggcgggaggaaggga
aggaagatgatgggaggtccgagtgctaacagaccccctgctgctaagaaacctcgcacc
tgtggcatctgccacatgccaggacacacccgagtcacctgtcctcagcgatga
DBGET
integrated database retrieval system
