Maylandia zebra (zebra mbuna): 101477123
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Entry
101477123 CDS
T02814
Symbol
taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mze03021
]
101477123 (taf1c)
Transcription machinery [BR:
mze03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
101477123 (taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
Beta-prop_WDR36-Utp21_1st
RAI1
Motif
Other DBs
NCBI-GeneID:
101477123
NCBI-ProteinID:
XP_004538592
UniProt:
A0A3P9B329
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MDYQFPQELFPSFYNCGPPNLVQKHNAGGWASYDQVKPQVGSGPLSTWTFTSRHQVGGEL
WRQVEPVPVPLLAPKHAILSPLTPPDPMNFTEHMNNFFMDHSLDAFGCMSNVLSEHFSFK
LKGQKEKYFKDAVRMGRVTYFLDLLKVKMCEQKYPCRKLARHSCQLYDVVHSIPPELLGS
LLYDELAEQRDRLLFSEGTTGGALSFVPFSQSDGGSQHGCLLYPGNPALNTLNFHKVELQ
HHRSGPFCVDTSSKPFSFPLRGPVRQISTASLFGECCVAVRSDYLCGVWRFSERNEPQAL
QVVSTSEVATCISASPHVLGEVLVASESGAANLWTVGKGMQKVRHEDSNLYFNAKSPWRW
CEFTAHPRVVLYADRTGVDLTDIRVSPASCHTLFRISSTADCRSGERLVLSRYLGDSHSF
HHLITTQYSAYIMDERFPCVPMLKWDHMMTSPPIFCHIVPGCASSSLSAGEATTKVLLSS
QSSQEIMMLQYAGGRGNACFSRGPPQALLRPRDSLKHLPVQIPHRLDVATNRLSSYAAGL
TCIQKAAEGGGGGEECMCVLQLTEAGDIFYQILEHKQPDTDESQPRAEEGDLKPRQQISP
GMTTRARKTAESLPPDSQLIISETSSDEDVVGPTQGPSRIVPETPERGQQASSFSEDSES
EMNRNRRRMQLQVVVNDDSGAEEEIGFDVGVNDKAVEVEEIVSGASRRKTPVKLSSGALV
TWKHWLQKLMQKTYENKHRSHLLQHFKANTQGLLCIPEGDQGTSRQDKCMQSLRKELRLG
MSRRSLLVHSMVSTSLRPPHVVPLPNQFNTNVWTDPLSHRLTLSWQGEEAWQKWWKDQLG
FTKEAKVQALRRRRRKEKEAKQATGRRLNLSASFTSSVSYQSALDDLSDSAGWSSGVSQA
AWSDTEDRGRLSQFLSMSEGETSRAATPSTVLNDTPTATPTPTPTATPQRDKRSNPQQTP
SRTTTLPQTQTLGLDFTPASQRRSKRPADDYLESLFAPQDDPSQSHYLDEGSSTNPLLAS
SQLRSSQSIPLRNYSVDLTRMNFGSPGSSQSKSQSYSQSQSSQGRLSQASQPKKKSRMGF
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggattaccagttcccacaggagctttttccatcgttttataactgcgggccgccgaat
ttggtgcagaaacacaatgctggaggctgggccagctacgaccaggtcaaacctcaggtt
ggttctggtcctctctccacctggactttcacatccaggcatcaggtcggaggggagctg
tggcgtcaagtcgagcctgtgccggtccccctcctggctcctaaacacgctattctttcg
cctttgacacctccggatccaatgaacttcacagagcatatgaataattttttcatggat
cactccctggacgccttcggctgcatgagcaacgttctgtccgaacacttctcctttaag
ctaaaagggcaaaaagagaaatattttaaggatgcagtgaggatggggagggtgacctac
ttcctggatttgctgaaggttaaaatgtgcgagcagaagtatccctgccggaagctggcc
cggcacagctgccagctgtatgacgtggtgcactccatccctccagagctgctcggctca
ctgctgtacgatgagctggcggagcagagggaccgcctgctgttctccgaaggaaccaca
gggggtgctctgagtttcgttcccttttcacagagtgatggtggctctcagcatggctgc
ctcctctatcctggaaaccctgcactgaataccctcaactttcacaaggtggagctgcag
caccacagaagcggtcctttctgtgtggataccagcagcaaaccgttcagcttcccactt
agaggccccgtcagacagatcagcaccgcctcgctgtttggcgaatgttgtgtggctgtg
cggtcggattacctctgtggtgtttggaggttcagtgagagaaatgagccgcaggcactc
caggtggtcagcacgtcggaggtcgcgacctgtatcagcgccagtcctcatgttttaggt
gaagttctggtggcgagcgagagcggagccgcaaacctgtggacggtggggaaagggatg
cagaaggtgcgacatgaggacagcaacctgtacttcaacgccaagtctccatggagatgg
tgcgagttcactgcccacccgagagtggtgctgtatgcggacaggacgggggtggaccta
acagatatcagggtgagtccggcctcctgccacactctgtttcgtatcagcagcaccgct
gattgtcggagcggagagagacttgtcctgtccaggtatctaggagactcccactccttc
caccacctaatcaccactcagtactcggcctacatcatggacgagcgcttcccgtgcgtc
ccaatgctcaaatgggatcacatgatgacgtctccacctattttctgtcacattgttcct
ggctgcgcctcgtcaagcttgtcagctggcgaagcaaccactaaggtcctgctcagctcc
cagagttctcaggaaattatgatgctgcagtatgcaggaggcagagggaacgcctgtttc
agtcgaggtcctcctcaggctctgctcaggcccagagacagtctgaaacacctcccagtc
cagatccctcaccgcttggacgttgcaaccaacagactgtcctcatatgccgcaggtctc
acttgcatccagaaggcagcagaaggtggaggtggtggcgaggagtgcatgtgcgtcctc
cagctgacggaggcaggagatattttctatcagatcctggagcacaagcagccggacacc
gacgagtcacagcctcgagccgaggagggtgatctgaagcctcggcaacaaattagtcca
ggaatgacaacacgggcaaggaaaacagctgagagccttccacctgattctcagctgatc
atctccgagacatcaagtgacgaagacgtcgttgggcccacacagggtccatcgaggatt
gtacctgaaacaccggaaagaggacagcaagcatccagcttctcggaggattcagagtca
gagatgaaccggaaccgaaggcggatgcagctgcaggttgttgtcaacgatgattcaggg
gcggaggaagaaattggatttgacgtcggtgtgaatgataaagctgttgaagtggaggaa
attgtcagtggtgcatctcggagaaagactccagtaaagctaagcagtggtgctctcgtc
acatggaaacattggctccagaaactgatgcaaaaaacctatgaaaataagcaccgctca
cacctcttgcagcacttcaaagccaacactcaaggtctgctttgtattcctgaaggcgat
caaggcacttcacggcaggataagtgcatgcaaagcctgaggaaggagctgaggttgggc
atgtccagacggtcactgctggttcacagcatggtctccacctctctcaggcctccacat
gtagtacccttaccaaaccagtttaacacaaatgtctggacagatccactcagtcaccga
ctgaccctctcctggcagggtgaggaggcatggcagaagtggtggaaggaccagctgggc
ttcaccaaggaggcaaaggtgcaggctctgcgaaggaggaggaggaaagaaaaagaggcg
aagcaagccactggacgtcgattgaatctgagcgctagctttacctcgtctgtcagctac
cagtcggcgctggatgacctctctgactctgcgggctggtcctccggagtcagccaggcg
gcgtggtcagacacagaggacagagggaggctgtctcagttcttaagtatgtccgagggt
gagacttcgagggctgcgacgccttccaccgttctaaatgacactccaacagcaactcca
actcccaccccgaccgccacaccacaacgtgataaacgtagcaaccctcagcaaaccccc
agcaggaccaccacccttcctcagacccagacactcggactggacttcacaccagccagt
cagaggaggagcaaacgaccagcagacgactacctcgaatctctgttcgcgccacaggat
gatccttcgcagagccattacttggatgaggggagctccacaaatccactcttggcctca
tctcagctccgcagctcccagtccatccctctccgaaattacagtgtggatttgaccaga
atgaacttcggctcgccaggctcctctcagtcaaagtctcaatcctactctcagtcccag
agttcacagggtcgactgtcacaggcatcgcaaccaaagaagaagtctcgaatgggattt
tga
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