Maylandia zebra (zebra mbuna): 101477130
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Entry
101477130 CDS
T02814
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101477130 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mze03036
]
101477130 (nfrkb)
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
101477130 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHD_2nd_NFRKB
WHD_1st_NFRKB
ASXH
Motif
Other DBs
NCBI-GeneID:
101477130
NCBI-ProteinID:
XP_004564088
LinkDB
All DBs
Position
LG10:13180899..13189541
Genome browser
AA seq
1274 aa
AA seq
DB search
MDALAHMLSDPLDPKEENDEQITEECMLGNCRVSLPEDLLEDPEIFFSVLSEGTWREVLT
DSQRQHLRQFLPQFPENNSVEQDSTISDLFNNKKFNFGNPLHLAQKLFRDGYFNPEVVKY
RQLCAKSQRKRQVHCLQQYYHRLLKQILVSRKELLDFAVQNGLDFPHKRRLPTKTHAEMR
EARVTRRLSRIMKEVKAECGDSNASSDDDDISPWTPAPQSPSSPTPTVSVRVLPSLSTQD
MKSTEKIELGEQDLKVMLQNHREKRKRQPDHPDLITSDIHLGDILSRANMGRKGTMPLFD
LSLPKKKIRDERRKKKMRTIKVESEDTCDTLAPPDTPSAPPANIINSLPDAPSTPLTNIK
EEVVEEYLSSPVPVEEIVASFFSLLENILRTEGPASTSVLEEKVQIWQSSPASSINAWFS
SASCWSDLVVQALQFLAGETKDGMMALPSGFSPFVEFSDECQQWRWIGPTQDTEKDLSAL
CQLWLDSKDFIVKTENEETLDMTSPTPRLSTDYVVRPSTGDERQVFQVQEQQRYNQPHKA
FTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLVRDAAARLPNGEG
TRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRNRS
QEEFERIHQAQAAAAKARKALQQKPKPAAKPKSGSKDGGNKTGFLEAGQDIGSNPMSPIP
TTPTPNTPGTPKSPLPSTVTTPTKTRVPDTIKTSPGVLLVSPPSLPQLGTILPTSQACPP
ASQPVTSHAARIVSHLTAGSLPQVRVVPAQPGLGSSAGSQQATLVHQTPHQIRMPVSVSA
KGISQAVVSVPLRSQPASSPVQVPTTLSVSAVTVAKPQSRSPGSPATNPASPAVLQGVTS
PNIKQVSITGQLGVKSPGAGIPITATNLRIQGKDVLRLPPSSITTDAKGQTVLRITPDMM
ATLAKSPVTTVKLTSDFLGSASTGGKSISATLHVTPPHPSPSSVSSAASCTGEVQTTKAG
HVASTLLKAAGDTTIRLMPTLAVTVADQKSRTFSTVTSPDKTGATIRIMPGLGVIPQKPG
QTITMTTTTGSKPLTASTCANVVTMPASVVAGAKGITVASGASGSPLTLGTATATVRQVP
TTVVTTQTGKLPARITVPLSVLNQPLKSKSVVTTPIVKGSLNTNISSLGRNIILTTMPAG
TKLIAGNKPVSFVTAQQFQQLQQQGQATQVRIQTVPAQQVQHMAAGSPKSVSTVVVTTAP
SPKCTPDTPPAPQQ
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggacgcccttgcacacatgctttcggaccctcttgatccaaaagaagagaacgatgag
caaatcaccgaggagtgcatgctggggaactgcagagtgagccttccagaggacctcctg
gaggaccctgaaattttcttctctgtgctgagtgaaggcacttggcgtgaagtactgaca
gattcccagcggcagcaccttcgtcagtttctgccgcagtttcctgagaacaatagtgtg
gagcaggacagtaccatcagtgacctattcaataataaaaaatttaactttgggaacccc
cttcatcttgcacaaaaactattcagagatggttacttcaatcctgaggtggtcaagtac
agacaactgtgtgccaagtcccagaggaaacgacaggtgcactgccttcagcagtattac
cacaggctgctgaagcagatcctcgtctccagaaaggagctgctggactttgcagtacaa
aatggtctggactttccacataaaagaaggttaccaaccaaaacccatgcagaaatgcgg
gaggcaagggtgacaagaagattgagtcgcataatgaaggaggtcaaagctgagtgtggg
gacagcaatgcttcatctgatgatgatgatatatcaccatggactccggcacctcagtca
ccctcttctccaacacccacggtctcagtcagagtactaccaagcctctccactcaagac
atgaagagtactgaaaaaatagaacttggtgagcaggatttgaaagtcatgctgcagaat
catcgtgagaagaggaagcgacaaccggaccatccagacttgataacctctgatatccac
cttggagacatactttcaagagcaaacatgggtcgtaaagggactatgccactcttcgat
ctgtctttgcctaagaagaagatcagagatgagagaaggaagaagaaaatgaggacgata
aaagttgaatctgaggacacctgtgacactcttgcacctccagacaccccatcagctcca
ccagcaaacataatcaactccctgccagatgcaccgtctaccccgctaaccaacattaag
gaggaagttgtggaggagtatctaagcagtcccgttccagttgaggaaatagtcgccagt
tttttcagtttgctggaaaacatcttgaggacagaaggtcctgccagtacttcagtgttg
gaggagaaagttcaaatatggcagtcatctccagcaagttccattaatgcatggttttct
tcagcctcgtgctggtctgacttggttgttcaagccctgcagtttcttgcaggagagact
aaagatggcatgatggcacttcccagtggcttttctccatttgtggaattttctgatgaa
tgtcaacagtggaggtggatcggtcccactcaggatacagagaaggatttgagtgcactg
tgtcagttgtggttagactccaaagatttcattgtcaagacagaaaatgaagaaacatta
gacatgacctctcccacaccgagactttcaactgattatgtcgtgcgtcccagcactgga
gatgagagacaagtgtttcaagtccaggagcagcaacggtacaaccagccacataaggct
ttcacgtttaggatgcatggctttgaatctgtggtgggtccagttaaaggagtgttcgat
aaggagatgtcactaaacaaagccagggagcacacgctgctgcgctcagaccgaccacca
tacgtcaccattctttctctggtacgggatgcagcagccagattacccaatggggaggga
acgagagcagagatctgtgaactgctgaaagactcacagtttcttgctccagatgtcaca
agtgcacaggtgaatacagttgtcagcggggctctggatagacttcactatgagaaagac
ccctgtgtcaagtatgacatcggccgcaaactgtggatttacctgcaccgcaatcgcagc
caggaagagtttgagaggatccaccaggctcaagctgcagctgcaaaagcaagaaaagct
ctacagcaaaaaccgaaaccagcagctaaacctaagtctggaagcaaagatggaggcaac
aaaactggatttttggaagcaggacaggatataggttctaatcccatgtcaccaatcccg
acgacacccactccgaacacacctggaacccccaaatcacccttaccctccacagtcacc
acaccaacaaaaaccagagtcccagatacaatcaaaaccagcccaggtgttcttcttgtg
tcccctccatcgttgccccagctgggaactattttgcccacaagtcaggcttgtccacca
gcttcacagccagttacatcccacgcagctcgtatagtgagtcacctgacggcaggttct
cttccacaagtacgagtcgttcctgctcagcctggcctggggtcatcggcaggaagtcag
caagccacactggtacatcagacccctcaccagatccggatgccagtgtcagtgtctgct
aaaggaatttcacaggctgtggtgtctgtgcctttaagaagtcaacctgctagcagtcca
gtccaggttccaactacattgtctgtgtcagctgtaactgtggccaaacctcaatctcga
tcacctggtagcccagctaccaaccctgcttctccagctgtgctgcaaggagtcaccagc
ccaaacatcaaacaggtgtctatcacaggacaactgggagtaaagtctccaggagcagga
attcctatcacagctacaaaccttcgcatccaaggcaaagatgtcctacgcctcccacca
tcgtccataaccacagatgctaaaggccaaacagtgctgcggatcaccccagacatgatg
gcaacacttgccaaatccccagttacgaccgtcaagctcacttctgactttctgggctct
gcctccacaggcggcaagagcatatcagccactcttcacgtgacaccaccccatccttca
ccttcttcggtgtccagtgctgcatcctgtactggggaagtacagaccactaaagcagga
cacgttgcctcgaccttgttaaaggctgcaggagacacgaccattcgtttgatgcccacg
ttggccgtcactgtggccgaccaaaaatctaggaccttctccactgtgacttccccagac
aagaccggcgccacaattcggataatgccgggcctgggtgtaattccacagaaaccaggt
cagaccatcacaatgaccaccaccactggcagtaaacctctcacagcaagtacatgtgct
aacgtagtgaccatgcctgccagtgttgtggccggtgctaaagggatcacagtggcttct
ggagcttcggggtcacctctgacgctaggaacagctacagctactgtgcgacaggtccct
actacagttgtcaccacacaaacggggaagttacccgcacggatcacagtccccctgtct
gtcctcaatcagccactgaagagcaagagtgttgtaacgacacccattgtgaaaggaagc
ctgaacacaaatattagcagcctgggcagaaacatcattctcaccaccatgcctgctggc
acgaagctgattgcaggaaacaaacctgtcagttttgtcacagcgcaacagttccaacag
cttcagcagcaaggacaggccacacaggttcggatccagacagttccagcgcagcaggtt
cagcacatggctgcaggctccccaaaatctgtttcaacagtcgtagtcacaacagcacct
tcaccaaaatgtacgcctgatactccaccggctccacaacaatga
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