Maylandia zebra (zebra mbuna): 101477218
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Entry
101477218 CDS
T02814
Symbol
arhgef40
Name
(RefSeq) rho guanine nucleotide exchange factor 40 isoform X1
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mze04131
]
101477218 (arhgef40)
Membrane trafficking [BR:
mze04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101477218 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
PH
IQ_SEC7_PH
KIAA1755_C
DHC_N2
PH_10
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
101477218
NCBI-ProteinID:
XP_004563633
LinkDB
All DBs
Position
LG3:complement(29479153..29525560)
Genome browser
AA seq
1741 aa
AA seq
DB search
MCVYLCGSEAMEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDYFVPA
KHLLHKLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRLLRSNDFYLQVVPFSTR
CPRLALKCLAPGGRTVQEILVPESQHPLVFTTEWLHIINKERGHKREVGGGLDTCLVSTC
DGVVRLPWKEVVYPKFIHDPSEELGLMSNRLPSEGGSSLGGWGGSSSGELDSWSWDEEED
EDLQPDGLDSDCVLPRRRRSEDGLGRTSRQPQLDGDYVELLEPRGGPDGGVDPRQRYQEM
HGICKTKTLPLCRRGKAIKVRRGKAWGYGRTERSGSFRAILGIKGDAVAAKGEALPPLPV
PGVAEPGRGRRSFSSSVHDSDEGDKTNRDSEGLESRRLCFDGPFKERRPGVGKERDSNGH
TQLCKDDHKSKESKSNNSLDTGEIHELTNHKDGHVVEGHSDHGSHSDSVFEDADKPLSGD
SEANTPTSDAPQRPFAAVSKSGEITNTGSKKKSLSNQKSMDEKDEGKVEDRVCPRGKEVK
TAGFRAPRRKRKGKGAKGKAKTGGRVKEKALKMQVKTPQPSPATCTASTKLPTAKESQTE
EAEQADQTEGASAADSEATDNTVKSSAEAESSLPVCNGQSGTSFFNHSNEEAASPDKQNG
DASKEPALLRELDADLLQSGKLKLTGTVDRLGRVLVFTEADASEVGFSGEEMARVLACYH
TITRPAAKEKGLTVLMDSRRAPPSALLFSALKLFQGSVPGGLGSLLVLVEEQQESPSHSL
EGAEVHTVRGTSVLQQYVDKQQLPKEVDGDFIHCHADWLAFRLSLESLTERCESALSLLG
EALQSMDAEPMPDNIKAVPLSIDKHRQLMASVLADQRLTELQQKGGAWLAGLTNRASGLA
QKSPDCRAALAVTSKLYDSVDDALHRLVRVSNQRGRDLEALGRLAGLVDKLEKCDKEIEQ
VQSQLEDYKDPPLSLSRLSLKQQRFKTFKETANELHSETLSLLSDLEGWCELDWAGLSDV
QIRLPPVREKLRDMSHCLSDCWTTLDNTQRLLSTLTEATQWCDAVSSTSSSSSSSTCPLA
SLPPIPPSRFQDARSLAIELGGGALLDLWTQTVERYQRTVAQVKPRFLQSDRTQNQGQGK
TKTPSASSLWDLMGPEGEGDSWGLGAGGGEGGLQSWGSLASLFRPQTCSTLKIGEEKGNK
KEGTAGGSGAGGGGAGGGKFLSNLLNPTKKSPTEAPLPFKPPRKRHPSFDLQALLAPRRG
TATPKPAESPVAGASRNSPMSWLGRRALADPVITTSMAAAIPGWSGGGSSGGGVLIRGVE
VSSKEVVDHTGSPRQHVLLGRTDRETGTDRAGSTAQSKLYLLWCRMLSSERQYVTVLKGV
EETYLPLLELSDTPASIRGKADSLFPNWASLTTFHSQDLLPAMEGALVQSLLQQDCFSKF
RDQFLQYSQYIRTKPDLDSPLVTQAADFFKSKLPQASPVSPLAFPHCLQAPIQRLEQYCE
ALEELGGINPASDSALSILRHAQRHGEDLRASDLIVGCPIPVTERGELVRQGELTVSGGT
RRKRAGVRNVFLYQHVVIFTKHKNPSPGRTAYSYKHSIKTNEMGLTQSVGEEGVKFEVWV
RQAPRTRDCITLQARDREDREAWTHDIAHLLWTHAINNTELCLKESLCMGVSSRLLLDAT
GTPGSELDSIYSLSDRIHSSCSDTSSVGSQKEGGSPASGRDPRRSSGSTSCSQSQSPSTA
V
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtatatttatgtggttcagaggcaatggaggactgcgtgcagggggcgctctca
tcgctttatcctccttttgagagcacagccccacccctcctctcccaggtcttctcagtc
ctggagtcgacctatcaacacgacagtcttcgctatctcctggactacttcgtacctgca
aagcacctcctgcacaaactccagcagcatgcctgttctcagtacctgggttgcttgttc
cttcactctggctggcctctctgcctgggcgaaaaagtggttgtccaactttccactttg
gactggaggcttctgcgcagtaatgacttctacctacaggtggttcccttctctacacgt
tgcccaaggctggcactaaaatgcctggctcctgggggacggactgttcaggaaatcttg
gtgcccgagtcacagcatccccttgtgttcaccactgagtggcttcacatcatcaacaaa
gagcgaggtcacaagagagaagttggaggaggacttgacacctgtctggtcagtacatgc
gatggtgtggttagacttccatggaaggaggtagtctacccaaaatttatccacgacccc
tctgaagagttgggcctaatgtccaaccgtctgcctagcgaggggggtagcagcctcgga
ggctggggtggctcatcctctggggaattagactcctggtcctgggatgaagaagaagat
gaggatttgcaaccggatggcttggactctgactgtgtgcttcctcgacgaaggcgcagt
gaagacggccttgggcggacatcgagacaacctcagctcgatggggattatgtcgagctt
ttggaacccagggggggtcctgatggaggagtcgatccaaggcagcggtaccaagagatg
catggaatctgtaagaccaagactctacctctttgcaggagaggaaaggctatcaaggtt
cgcagaggaaaagcatggggatatgggcgaacggaaaggtcaggaagctttcgggctatt
cttggcatcaaaggagacgctgtggctgccaagggtgaagcattaccgccactgcctgtg
ccaggagttgccgagcctggccgagggaggaggtctttctcctcctcagtccatgactct
gatgaaggagataaaacaaacagagactctgaaggcctggaaagccgccgcctttgtttt
gatggcccattcaaggaaaggagacctggagtgggcaaggagagagatagcaatggtcac
acacagctatgtaaagatgaccacaaaagtaaagaatccaagagcaacaacagcttggac
acaggtgaaatccatgagttaacaaaccacaaagatggacacgttgtagagggccactct
gatcacggatcacattcggactctgtttttgaggatgctgataaaccactgagcggagac
agtgaggctaataccccaacatcagatgcaccacagagaccattcgctgctgtttcaaaa
agtggtgaaattacaaacactgggtctaaaaagaagagtttgtcaaaccaaaaatccatg
gatgaaaaggatgaaggaaaagtggaggacagagtatgccccagaggaaaagaggttaaa
acggcaggattcagagcaccaaggaggaaaaggaagggaaagggggccaaagggaaagct
aaaactgggggtcgtgtaaaggagaaggccttgaaaatgcaggttaaaactcctcaacca
agcccagccacctgcactgcttcaacaaaactgccgactgccaaggagagccaaacagag
gaagcagagcaggctgaccaaactgaaggtgcttctgctgcagatagcgaggcgacagac
aacacagtgaaaagcagcgcagaagctgaatcatctctgcctgtgtgtaacggacagtcg
ggcacatctttttttaaccactctaatgaggaggctgcgtcacctgacaaacagaatggt
gatgcttcaaaagagcccgccctgctgagggaactggacgcagaccttctccagtcaggg
aagctcaagttgacaggtacagtggacaggctggggcgtgttctggttttcacagaggcc
gacgcatcagaagtgggtttctctggggaggagatggcccgcgtcttggcctgttaccac
acaatcacgcggcctgcagccaaagaaaagggtttaacagtgttaatggacagcaggcgc
gccccaccctccgctctcttgttctctgctcttaaattgttccaggggtcggtccccggt
ggtcttggatcccttctggtgttggtggaagagcagcaggagtccccttctcattccctg
gaaggagcagaggtccacacagtgcgaggaacgagtgtccttcagcagtatgtagacaaa
caacagctgcccaaagaagtagacggggactttatccactgccacgcggactggctggcc
ttcagactgagtctggagagtctgacagagcgctgtgagagcgccctctcactgcttgga
gaagcactgcagtctatggacgctgagccaatgccagacaacataaaggctgttcctctg
agcattgacaaacacaggcagctcatggccagcgtcctggccgaccaacggttaactgag
ctgcagcagaagggcggggcctggcttgctggattgacaaatagagcatctggactggca
caaaagtcaccagactgcagagctgctcttgccgtaacttctaaactttatgacagcgtg
gacgatgcactccatcggcttgtccgagtgtccaaccaaagaggtcgtgacctggaggcg
ttggggcgtctggcggggttggtggacaaactggaaaagtgcgataaagagattgagcag
gttcagtcgcagctggaggactacaaggatcctcctctctccctcagcagactctcgctc
aaacagcagaggttcaagacgttcaaagaaacggccaatgagctgcacagtgagactcta
tcactgctcagtgatttggagggctggtgtgaactggactgggcaggcctgagcgacgtc
cagatccgactccctccggtcagggagaagctcagggacatgtcccactgtctgtctgac
tgctggaccactctggacaacacgcagaggttgttgtccactctgaccgaggccacccag
tggtgcgatgcagtctcctccacctcctcctcttcctcttcttccacctgccctctcgcc
tccctccctccaatacccccgtcccgtttccaggacgcacgctctttagcaatagagctg
ggtggcggggcactgctggatctctggactcagacagttgagcgataccagcgaacagta
gcacaggtcaagccccgattcctccagtctgaccggacgcaaaatcagggacaggggaaa
accaaaactccctctgccagcagcctctgggacctgatgggccccgagggagagggtgac
tcctgggggctgggagctggcggaggggaaggcggattgcagtcctggggatccctggca
tcactgttcagaccgcagacctgctccacactgaagataggagaggagaaagggaataag
aaagagggaacggcaggaggaagtggtgcgggaggaggtggggccgggggagggaagttt
ctatcgaaccttctgaatcctacaaagaagagccccacagaggctccacttcccttcaag
ccacctcggaagcgtcacccaagctttgacctccaggctctcctggccccccgtcgaggt
acagccacccccaaacccgctgagtcgccggtggctggggcgagccgtaactcccccatg
tcctggctgggacgacgggctttggccgacccagtcattactactagcatggctgcagct
attccaggatggagcggtggtggtagtagtggcggaggagtgttgatccgaggagtggag
gtcagcagcaaggaggtggtggatcacacggggtcaccgcgccagcatgtactgctgggg
aggacagacagggagacggggacggatagggccggttcaaccgcacagagtaagctgtac
ctgctctggtgtaggatgctaagttcagagaggcagtacgtgactgtgctaaagggggta
gaagagacgtacctgcccttactggagctctcagacaccccagcttccatcagggggaag
gcagactcgctgtttcccaactgggccagcctcaccacctttcactcgcaggacctactc
ccagccatggagggcgctcttgtgcaaagcctgttgcaacaggactgcttcagtaaattt
cgggaccagtttctgcagtattcccagtacatcaggaccaaaccagacctggattctcca
ctggtcacacaagcagccgactttttcaagtcaaaacttccccaagcctcccccgtctcc
cctctggccttccctcactgtctgcaggctcccattcagaggctggagcagtactgcgag
gcgctggaggagctgggaggcataaaccccgcctcagactccgccctctccatcctgaga
cacgcccagcggcacggcgaggacctcagggccagtgacctcatcgtcggatgcccgatc
cctgtgacggagcgcggcgagctggtgcggcagggtgagctgacggtgagcgggggaact
cggaggaagcgggcgggcgtgaggaacgttttcctttatcaacacgtcgtaatcttcact
aaacacaagaatcccagcccgggacgcaccgcctacagttacaaacacagcatcaagacg
aatgagatgggtctgactcagagcgtcggcgaggagggagtgaagttcgaggtgtgggtc
cgacaggccccgaggaccagagactgcatcaccctgcaagcgcgcgacagggaagaccga
gaggcctggactcacgacatagcccatctgctgtggacacatgccatcaacaatacagag
ttgtgtttgaaggagtcactgtgcatgggagtttccagtaggcttctgttggatgcaaca
ggaactccaggctcagagttggactccatctacagtctcagcgacagaatccacagtagc
tgttcagacacttcttctgtcgggagtcagaaggaggggggatctccagcgtctgggagg
gaccccaggagaagctctggatcaacaagctgctcacagagccagtctccctctacagct
gtgtga
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integrated database retrieval system
