Maylandia zebra (zebra mbuna): 101477324
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Entry
101477324 CDS
T02814
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X3
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101477324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101477324
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101477324
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
101477324
NCBI-ProteinID:
XP_004564257
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Position
LG6:21469599..21482780
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AA seq
555 aa
AA seq
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MSAEEADKTATTDASAGDEEEEWLYGDESESKDEDEEAKLNAAVSAPADASTDDAAAHAT
GNGVASEPTGEAAGEDVESDSDSDDDDDDVRVTIGDIKTGAPQYTTYGAPPVNLNIKSTG
SRPYGQVSAKLKGVDLDAPGNINGVPVLEVDMESFEEKPWRKPGADLSDYFNYGFNEDTW
KAYCEKQKRLRMGLEVSTVGSVTSKITVQQGRTGNEKDIPSLPVHTSKPDFTSPVSLYKS
AVSQVTRISPPQWTGPPPQDMSYYTKSSGTIDVIGGQLATISRVEGRRRHNLEGNNIQVI
SEHSTSEAEPAPAKIPTFFPPGPLPPNIPPPPFLPPPPNVSTAPPLIPPPRLPITVPPPS
FPPPTSGPPPSIIPTMDSSHPGGYDGRSVPPYPFPQGAYPPPMVGGVPPPWPPMIDNSKP
WDYYSRRDDKRDKDRERPRERTHEREREREHSPSAMSYTSDEERYRYRDYQERGYAERHR
DRASREKEERHRERRHREKEEGRHKSSRSSSRRRHDSEEGDSHRRHKHKKSKRSKEGKEA
SEEISADQENQEAME
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggaagcggacaaaacagccaccactgatgctagcgccggagacgaggag
gaggaatggctgtatggagatgagtcggagagcaaagacgaggatgaggaagccaagctg
aacgctgctgtcagtgcccctgctgatgcttcaacagatgatgctgctgcgcacgctaca
ggaaatggagttgcctctgagcccacaggtgaggctgcaggcgaggatgtggagagcgac
agcgacagcgatgatgacgacgatgatgtccgtgtcacgattggagacataaaaaccgga
gcgccacagtacacaacttatggagccccacctgtcaacctcaacatcaaatcaacaggc
tccagaccttatggacaagtttccgcaaagctgaagggagtggatctcgatgcacctgga
aacattaacggtgttccagtgctagaggtggacatggagtcttttgaagagaaaccatgg
aggaaaccaggagccgatctgtcagactacttcaactatggcttcaatgaagacacatgg
aaggcttactgtgaaaaacagaagaggctgcgtatgggcctggaggtctctacagttggc
tcagtgacaagcaagatcactgttcagcagggcagaactggtaatgaaaaagacataccc
agtttgccagttcacacctcaaagccagacttcacatctcctgtcagcttgtataagtct
gctgtcagtcaggtcaccaggatctctccccctcagtggactggcccgcctcctcaggac
atgtcttattatacgaaatcgagcggcacaatcgatgtgattggtggacagttggcaact
atcagcagagttgagggtcgtcgccgacataatctagagggcaacaatattcaggtgatc
tctgagcactcgacatcagaggctgaacctgctcctgctaagattcccacattcttccct
cccggaccacttcctccaaacattcccccaccgccatttctccctccgccaccaaacgtc
agtactgcacctccactcatccccccacccaggttgcccattactgtccctcctcctagt
tttcctccaccaactagtgggcctcctccttctatcatccccactatggacagcagccat
ccaggaggttatgatggacgctctgttcctccgtatccgtttcctcaaggtgcttaccct
ccccccatggttggaggtgtgcctcctccttggcctccgatgatagataactccaaacct
tgggactattattcccgccgagatgacaaaagagacaaggacagagaaagacccagagag
aggacacatgagcgggaacgagagagggagcacagcccttcagctatgagctacaccagc
gacgaggagcggtatcggtaccgtgattatcaagagcgtggttacgcagaacgccaccgt
gaccgtgcaagccgggagaaagaggaaagacacagagagaggcggcacagagagaaagaa
gaggggcgccacaaatcctcacgcagcagtagcaggaggaggcacgacagtgaggagggg
gacagccacagacggcacaaacacaagaagagcaagaggagcaaggagggcaaagaggcc
agcgaggagatcagcgcagaccaagagaatcaggaagccatggagtag
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