Maylandia zebra (zebra mbuna): 101477333
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Entry
101477333 CDS
T02814
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03030
DNA replication
mze03410
Base excision repair
mze03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101477333 (pole)
03410 Base excision repair
101477333 (pole)
03420 Nucleotide excision repair
101477333 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mze03032
]
101477333 (pole)
03400 DNA repair and recombination proteins [BR:
mze03400
]
101477333 (pole)
Enzymes [BR:
mze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101477333 (pole)
DNA replication proteins [BR:
mze03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
101477333 (pole)
DNA repair and recombination proteins [BR:
mze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
101477333 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
101477333
NCBI-ProteinID:
XP_004544589
LinkDB
All DBs
Position
LG12:16852474..16867447
Genome browser
AA seq
2292 aa
AA seq
DB search
MVLQNSGRYKADRGPSGDPENQDDGSSLSALKRLERSQFTDEMDARFGFDRMKEPGEKTG
WLINMHPAEILDEDKRMISAVDYYFIQEDGSRFKVSLPFKPYFYIATKKNCEREVISYLS
KKFQGKVAKLEILPKEDLDLPNHLVGLKRNYIKLAFNTVDDLVKVKREIAPAVRKNRERE
QSNDAYTSMLSSALSGGNVTSVDEDGMSKSISDQLDNIVDMREYDVPYHVRVSIDLKIHV
AHWYNVRNRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDNEAALIQRWFDHVQETKPNIFV
TYNGDFFDWPFIEVRAALHGLSMHREIGFQKDNQGEYKASQAIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQIFNKLTDDGHVLDSETYV
GGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMRHAIEEEEKIPLEQVTNFNEVC
DEIKKKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ATCQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPPRAFHTLNREEQAKHEK
KRLADYCKKAYKKTHVTKLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
SAQDSGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKTKVTISYPGAMLNIM
VKEGFTNDQYHELVDPASVTYNIRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSK
AANMPDAELFDLISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVI
SRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDMDIRSILDWSYYIERLGSA
IQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQIAHQPL
EAGPAADIEDFGMPPKPLQPAILISTKRKRASHGDDSQVESQDLELTQSWREILGPPPPT
GKTREERQVWLRYHKKKWELQLKQRKERKKRRRLLDGEAQPVGGGVIRGGPITGLGSFLR
RTARSILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGAT
YKKVNRMLPRSNMVYYLYEYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALVQ
LGCVCMVNKHVVRDMAGREADTFDLEHLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKALF
GLFIPSQRKASIFVLDTVRSNQMPNLSNLYTAERTALLEKTTEELLPPEKHNFEVRAEND
MKAISRALQRILLNYKEERRGPTLIAVQSNWELRRLTAGMPVLEEFPVVPVHVVDEISYN
VLDWQRLGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKH
NHLLWLSPTSRPDLGGKEADDSRLVMENDDRSSVEINAQGCYSTACVELDLQSLAVNTIL
QSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALCSNTFRILKSMVV
GWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKRLG
STVVYGNFNRIILCTKKRRIDDAIGYVEYITNSIHSKEIFHSLSISFSRCWEFLLWMDPA
NYGGVKGKLPSSVMYGEEGAQQKKTRQEEGDEDGSEDEDEENAEEEDGDGETDEVEDLIE
SNWNIMQYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNGPGATPVKRRGNSQASQQA
IGDLSALPGMISFSQEYVSSELTQNIFTITQKIQKKVTGTRSVTHTSEMFPILPGSHLPL
NNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEEAQFRDPCNSYILPEVI
CHHCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQAQYDTESIEMALVEALQKKLMSYTLQ
DLVCSKCKGVKETNMTLYCKCAGDFDLTFPAKSFSEQITVFRNIASHYNMSFLEETIGWL
LVMSPQINQGVH
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcagaacagtggacgctacaaagcggaccgaggaccgagtggggatccggaa
aaccaggatgatggatcctccttatcggccctcaagcggctggagcgcagtcagttcacc
gacgagatggacgctcgcttcggattcgacaggatgaaggagccgggagagaaaacgggc
tggctgatcaacatgcaccccgcagagatcctggatgaagacaagaggatgatcagcgcg
gtggactattattttatacaggaggatggaagcaggttcaaggtgtctctgcccttcaag
ccatacttttacattgcgacgaaaaagaactgcgagagagaagtcatctcatatttatct
aagaagttccaaggaaaggtggcaaagctcgaaattctcccaaaagaggacctggacctg
ccaaaccaccttgtcggactgaagagaaactacatcaagctggcgttcaacaccgtggac
gacctcgtgaaggtcaagcgtgagattgccccggcggtacgtaaaaacagagagagggag
cagtccaacgatgcctacacctcaatgttgtcaagtgcgctatcaggtggcaacgtgacc
tcagtggatgaagacgggatgtcaaagagtatttcagatcagttagacaacatagtggac
atgagagagtatgacgtgccctaccatgtgcgtgtgtccattgacctgaagatccacgtg
gctcactggtacaatgttcgaaacagaggcagcgcttacccgccagagattgtacggaga
gacgatcttgtggagcgaccggaccctgtcgttttggcgtttgacatcgagaccaccaag
cttccgctgaaattcccagacgcagagacggatcaaattatgatgatctcctacatgata
gatggacaggggtttctgatcacaaaccgagagatcgtctctgagaacattgaggatttt
gagtttacccccaaacctgagtatgaagggccattcactgtttttaatgaggacaatgag
gcagctctcattcagaggtggtttgatcacgttcaagaaacaaagccaaacatctttgtg
acctacaatggagacttctttgattggcctttcattgaggttcgggctgccctccatgga
ctgagcatgcacagggagatcggtttccagaaagataaccagggagagtacaaggccagt
caggccatccacatggattgtttaaggtgggtaaagagagacagctacttgccggtggga
agccacaatctgaaggcagcagcgaaggccaaactgggttatgaccccgtggagctcgac
ccagaagaaatgtgccgcatggcaaccgaggagccgcagactctagcaacctattctgtg
tcagatgccgtggccacatattacctgtacatgaaatatgtccaccccttcatcttcgct
ctgtgtaccatcatccccatggagcccgatgaggtgctgcgtaaaggttcgggaacgctg
tgtgaagctttacttatggtgcaggccttccacgccaacatcatcttccccaacaagcag
gagcagatcttcaacaaactgacagacgacggccacgtcctagactccgagacttacgtg
ggcggtcacgtggaggcgctggagtctggagtgtttcggagtgacatcccgtgtcgtttc
aaaatgaacccggctgcatttgacttcctgctgcaaagagttgagagaacgatgcgtcat
gccatcgaggaagaggagaaaatccctctggagcaagtcactaactttaacgaggtttgt
gacgaaattaagaaaaagctgacgtccctcaaggaggttccaaacaggattgaatgtccc
ctcatctatcatctggacgttggggcgatgtaccccaatattattctcaccaaccgcctt
cagccatctgctatggttgatgaggccacgtgcgctgcctgtgacttcaacaagcctggt
gccacgtgtcagaggaggatgacctggcaatggagaggcgaaatcatgcccgccagccgc
agtgagtttcaccgcatccagcagcaacttgagtctgagaagttcccgccactgttcccc
aacggtccacctcgggctttccacacgctcaacagggaggagcaggccaagcatgagaag
aaacgtcttgcagactattgtaagaaggcctataaaaagacacacgtcaccaagctggag
gagcgagttaccaccatctgtcagagggagaactccttctatgtggatactgtaagagct
ttcagagatcgccgttatgaattcaaaggacttcacaaggtgtggaagaagaaactttca
tcagctcaggacagtggagacgccgctgaggtgaagcgctgcaaaaacatggagatcctg
tacgaatcccttcagctcgctcacaagtgcatcctcaactctttctacggctacgtcatg
aggaagggggcccgatggtactctatggagatggccggcattgtgtgtttcactggagcc
aatattattactcaggccagagagctcattgagcaaatagggaggcctcttgagttggac
actgatggtatctggtgtgtcctccccaataccttcccggagaactttgtggtgaagacc
agtaacgagaagaagaccaaggtgactatctcctacccgggtgccatgttgaacatcatg
gtaaaagagggatttaccaacgatcagtaccacgagctggtcgaccccgcgtccgtcact
tacaacatcagggcagagaacagcatcttctttgaggtggacggaccgtatctggcaatg
atcctgccagcctccaaagaggagggcaagaagctgaaaaagaggtacgctgtgtttaat
gaggatggttctttagccgagctgaagggttttgaagtgaagagaagaggagagctccag
ctcatcaagatttttcagtcgtctgtgttcgaggctttcctcaaaggaactactctagag
gaggtctacgcttcagtggccaaagtggccgactactggctggatgtactttacagcaag
gctgccaacatgccagacgcagagctttttgacctgatttcagagaatcggtcaatgtct
agaaagctcgaagattacggtgagcagaagtccacgtccatcagcacagctaagaggctg
gcagagttcctgggggatcaaatggtgaaagatgccggtctgagctgtcgctatgtcatc
tcccgaaaacctgagggttcccctgtcacagaaagggccattcctctagccatctttcag
gccgagccgagcgtcaagaaacatttccttcgcaagtggttgaagatgcccagcttgcat
gacatggacatccgctctatccttgattggagctattacatagagaggttgggtagtgca
atccagaaaatcatcaccattcctgctgctctgcaacaggtgaagaatcctgttcccaga
gtgaggcatcctgactggctacacaagaaactcctggagaaaaatgacatatacaagcag
aagaaaattagtgagctgtttaccagcgagggcaagagacagattgcccatcagcctctt
gaagcaggtcctgctgctgacatagaggattttgggatgccacccaaacccctgcagcca
gctatccttatcagcactaagcggaagcgggcgtcacacggagacgacagccaggtggag
tctcaggatttagagcttacgcagtcctggcgagagatcctgggaccgccccctcccacg
ggaaaaacacgggaggaacgtcaagtttggctgcgctaccataagaaaaagtgggagcta
cagctgaaacagagaaaggagaggaaaaagaggaggaggctgctggatggggaggctcaa
ccagtgggcggaggagtgatcagaggtggtcccatcacaggcctggggagcttcctccgc
agaacagctcgcagcatcctcgatatgccgtggcaaattgtccagattgcagaaactagt
caccctggtctgtataagctttgggctgtgattggaaatgacctccactgcatgaaactc
aacatcccacgtgtcttctacgtcaatcaaaaagtcccaaaacaggaggagggagcgacg
tacaaaaaggtgaatcgcatgctgcctcgctccaacatggtttactacctctatgagtac
tctgtgccagaggacatgtaccaagagcacatcaatgagatcaacgcagacctctctgca
cctgacatcgaaggagtctatgaaacacaggttcctttgctgtttcgagctttggtgcag
ctaggatgcgtgtgcatggtcaacaaacatgttgtgagagatatggccggaagggaggct
gacacgtttgatctggaacatctggagatgaggtcgctggcccagtttagctacctggaa
cctgggagtgttcgccacatgtatttgtatcatcacagccaaggccacaaggctctgttt
ggcctcttcatcccctctcagcgcaaagctagcatcttcgtcctggacacggttcgaagc
aaccagatgcccaacttgagtaacctctacacagctgaacgcacggcactcctggagaaa
acgacggaggagcttctgcctccggagaaacacaactttgaggtgcgggctgaaaatgac
atgaaggcgatctcacgtgcactccaacgaatactcctaaactacaaggaggagcgccgt
gggcccaccctcatcgcagtgcagtcaaactgggagttgcgtcgattgacggccgggatg
ccggtgctcgaggagttcccggtcgttccggttcatgtggttgatgagatcagctataat
gtgttggactggcaacggctcggtgcccggcgcatgatccgccactacctcaacctggac
agctgtctgtcacaggcttttgacatggccagatattaccacttacctgtggggaacttg
ccacaggatgtgtccatctttggctcagacttgtttttggcaagacatctacggaagcac
aaccacctgctatggctttcacccacatccaggcctgacctgggaggaaaagaggctgat
gacagccgtctggtgatggaaaatgatgacagaagctctgtggagatcaatgctcaggga
tgttattcaacagcatgtgtggagttggacctgcagagcctggcggtgaacaccatcctc
cagtctcagcatgtcaacgacatggagggcggagccagcctgggcgtcagttttgatgtg
atccagcaggcatctttggaggacatgatgtcaggaaaccagggagcaagcgctctggct
agctacgatgagacagctctctgctccaacaccttcaggatcttaaagagcatggtggtg
ggatgggtcagggagatcacacagtaccacaatgtgtatgcagacaaccaggtgatgcat
ttctaccgctggctgcgctcccccagctcgctgctgtatgaccccgccctgcaccgcacc
ctgcataacatgatgaagaaagtgtttctgcagttggttgcagagttcaaacgtctcggc
tcgactgtggtgtacggaaactttaataggatcattctgtgtactaaaaaacgcaggatt
gatgatgccattggctatgttgagtatatcaccaacagcatccattccaaagaaattttc
cactctttgtccatctccttctcgcggtgctgggagttcctgctgtggatggaccctgcc
aactatggtggcgtgaagggcaaactgccctccagcgtcatgtatggagaggaaggagcc
caacagaagaaaaccagacaagaggagggggatgaggatggcagtgaggatgaagatgaa
gaaaatgctgaggaggaggacggagatggagagacagatgaagtagaggatttgattgag
agtaactggaatatcatgcagtatcttcctcaaaccgcctcctgtcagaagtacttcctc
atgatcgtctcagcgtacattgcagcggtctatcacagtatgaaagaggagctgagacgt
aacggcccaggagcaacaccagtaaagagacgtggcaacagccaggcttcccagcaggca
attggggatctgagtgcacttcctggaatgatctccttctcccaggagtacgtgtccagc
gagctgacacagaacattttcaccatcactcagaaaatccagaagaaggtcactggtacc
aggagtgttacccacacctcagagatgttccccatcctgcctgggtcacaccttccactc
aacaacccagcactggagtttatcaaatatgtctgccaggttctttcactagacgccaac
attgtaaatcaggtgaacaagctgaagagagacctcctacgtcttgtggatgttggagag
ttttcagaggaagcccagttccgtgacccgtgtaactcctacatcctgccagaggttatc
tgtcaccactgcaatttctgtcgggaccttgacctctgcaaggacccgtcagtggcacag
gatggttcagttttgcctcagtggttctgctccaactgtcaggcgcagtatgacaccgag
tctattgagatggctctggtagaagctctgcagaagaaactgatgagctatacgctgcag
gatctggtgtgtagcaaatgtaagggagtgaaggaaaccaacatgaccctctactgcaaa
tgtgctggagactttgacctcaccttcccagccaagagcttctctgagcagatcacggtg
tttaggaacatagcatcccactacaacatgagcttcctggaggagaccataggctggctg
cttgttatgagccctcagatcaaccagggtgttcactga
DBGET
integrated database retrieval system
