Maylandia zebra (zebra mbuna): 101477353
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Entry
101477353 CDS
T02814
Symbol
zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mze04121
]
101477353 (zswim8)
Ubiquitin system [BR:
mze04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
101477353 (zswim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Ribosomal_L24e
Motif
Other DBs
NCBI-GeneID:
101477353
NCBI-ProteinID:
XP_024660420
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All DBs
Position
LG13:complement(29775196..29838437)
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AA seq
1957 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSSSRRPRALSELEGWRKQSAGPNSPLSRLKDG
QVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGSP
DEFQRGEQLYRIRAVKDPLQIGFHLSATVVSTQSSQSKGAYNVAVMFDRCRITSCSCTCG
AGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPTA
QRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSPV
VFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLEI
LTEQCLTYEQIISWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLAV
LDPTMSPCRRLELAGQLRQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVESCYFNWEVAYP
LDGITYCSADKKSATFCWSRAMLHQRGIKSPAGGGVDSSESGARAEGGPAGEYKGRASSN
STQQEVAVRPKETILTKRKGLSVSGGGGMLVRLGGSVSLSLEDGGGKCMYKGPGSSSGGK
LKLTQGGGKGATGGGPGGGGGLGSSKHTSAKRRTSSEDSSLEPDLAELSLDDGCNLALGA
EASNTFEFLPPPPEMLPSPSPLLRDSRKCNSGGSKIFETKHSSRDSAAIAAAEPAPPCFP
LKENGVIVVGMPSTAEKEAEVEPALNIDEDVDSAGSNQPLVSAVTVRSGTLQTSAKPVLG
CKELVSAAAVAGSGAVVVGGAAREGAEAVRAAAEGEAVGEDDYQAYYLSAASEEGVDRQL
ADNHQEEEPDIFAGIKPLEQEGRMEVLFACAEALHAHGYSNEACRLAVELARDLLANPPD
LKVEQPQTKGKKSKVSTTRQTQVATKTLSKAAFLLTVLSERLELHNLAFNTGMFSLELQR
PPASTKALEVKLAYQESEVVALLKKIPLGLIEMSAIRERAEQLRDGNFCDYRPVLPLMLA
SFIFDVLCTPVVSPTGSRPPSRNRNNEMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEG
TRRVKGDLALALMITYKDDQSKLKKILDKLLDRESQTHKPQTLSSFYSSKPAAGSQRSPS
KHTSSSHSGVGGATGVVSKHATSSSSASTLVASSSSSSSALTIGGEGVAPQADLNPVPNN
TAGESAAETREHDGPSSSSDQQNDIASFKEATVPSRLALGARCGYSQRCWGSPVRQKKKH
TGMASIDSSAPETTSDSSPTLSRRPMRSGWAAASWGRGQDSDSISSSSSDSLGSSSSSGS
RRAGGGARAKSTDTSRYKGRRPECHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSI
FTQPSASGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGS
AALNILVECWDGHLTPPEVASLADRASRARDPNMVRAAAELALSCLPHAHALNPNEIQRA
LVQCKEQDNVMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQSVGGGSSQQRETSG
RCGANGGSGRRPPESNCGVLDSGVNMESPGVATVTASVTAAAVVPVISVGSTIYQSHAMP
GQAMAHPHTPGLHPYTTIQAHLPTVCTPQFLGHPLQHVPRPTVFPVSGAAYPQGMHPAFI
GAQYPFSVATGPQPSMAATAVAFPGVPVPSMTQIAVHPYHTEAGLPLSTTVAVGGVHPGP
TIQAIQGASLPSLSSQPASLVSSPFPAEDEQHSQPISQQGLHYLHSAYRVGMLALEMLGR
RAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVNYVYQFCVGAAKGVLSPFVLQELIMEAL
QRLNPAHIHAHLRTPAFQQLVQRCQQAYLQHIHHRLIHLTPADYDDFVNMIRSARGAFCL
TPVGMMQFNDVLQNLKRGKQTKELWQRISLEMATFSP
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatgtttgccgagtgggaggatggggagaggttctcctttgaagactcggac
cgattcgaagaagactctctctgctcttcatctcggaggccgagagctctgtcagaactg
gagggatggaggaagcagtctgctggacccaactccccactgtcaagattaaaggatggt
caggtgattccactggtggagttgtcagcaaaacaggtcgcctttcacatcccatttgaa
gtggtagagaaggtctatcctcctgtcccagaacagctccagcttcgcattgcctactgg
agcttccctgagaatgaagaggacatcagattatattcctgccttgctaatgggagtcca
gatgaattccagcgtggagaacaactctataggatcagagctgtcaaagaccctttgcaa
attggctttcatctcagtgctacagtagtctccactcagtccagtcagtctaaaggagcc
tacaacgtggcggtcatgtttgatcgctgtcgcatcacctcctgcagctgtacctgtggt
gcaggagccaagtggtgtgcccatgtggtggcactctgtctcttcaggatccacaatgca
tcagcagtgtgtcttagggctccagtttctgagtctttgtccagactgcagagagaccag
cttcaaaagtttgcccagtacctcatcagtgagctgcctcagcagatcctgcctacagcc
cagcgactcctggatgagttgctgtcctcacagtccactgccatcaacactgtgtgtgga
gctccagatccaacagcaggcccttcagcatcggaccagagcacctggtatttggatgag
tcaaccctcagtgacaacatcaaaaagactctacacaagttctgtgggccttcacctgtt
gttttcagtgatgtgaactccatgtacctgtcatccaccgagccaccagcagctgctgaa
tgggcatgtctgttgcgacctctgaggggtagagagccagaaggcatctggaaccttctg
tccattgtcagggagatgtttaagaggcgagacagcaatgctgccccgctgctggagatt
ctcactgaacagtgcctcacctacgaacagatcattagctggtggtatagcgttcgcaca
tcagcgtcacacagcagtgctagtggtcatactggccggagcaacggacagtcagaagta
gccgctcatgcctgtgcaagcatgtgtgatgagatggtggttctttggaggctggcagtg
ctcgaccccactatgagcccctgcaggcgtttggaactggccggtcagctgaggcagtgg
cacctgaaagttatagagatagtgaagcggggacagcatcgcaagtccctggataaactg
tttcaaggctttaaacctgctgtggagtcctgctatttcaactgggaggtggcctaccca
ttggatggcattacctactgcagtgcagataagaagagtgccacgttctgctggtccagg
gcaatgctgcaccagagaggaatcaagtcgcctgcaggaggtggtgttgactcttctgaa
tcaggggccagagctgaaggcggaccggcaggagagtataaaggcagggcaagtagtaac
tccacacaacaggaggtagcagtgcgacctaaggagaccattctgaccaagaggaaggga
ctgtcagtgagtggaggtggagggatgcttgttcgactgggagggagtgtctcactatcc
ctggaagatggaggaggaaagtgcatgtacaaaggcccgggttcctcctctggaggaaag
ttgaaactgactcagggaggtgggaagggggcaacaggaggaggacctggcggtggtgga
ggattaggaagtagtaagcatacaagtgccaaacgcagaactagtagtgaagatagctcc
ttggagccagacttggctgagctcagtctggatgacggctgcaatctggctttgggggct
gaggctagtaacactttcgagtttctcccaccaccaccagagatgttgccctctccaagt
ccactgctccgagattcacggaagtgcaacagtggagggagcaagatttttgaaacaaag
catagcagccgtgactctgcagcaattgctgctgcagagcctgctccaccttgtttccct
ttgaaagagaatggagtgatagttgtgggcatgcccagcacagcagaaaaggaagccgag
gtggagccagcacttaacatagatgaagatgtagattcagctggtagtaaccagccttta
gtttcagcagttacagtgagatcaggcacccttcaaacatctgctaagccagtgctaggc
tgcaaagagttggtgtctgctgcagcagtagcaggaagtggagcagtagtggtaggtgga
gcagctcgtgaaggagctgaagctgtacgtgcagctgctgaaggagaagctgtgggtgaa
gatgactaccaggcatactatctgagtgctgcttcagaagagggtgtagacagacagcta
gctgacaaccatcaggaggaggagccagacatctttgcagggatcaaaccactggagcag
gagggacgcatggaggtgctgtttgcatgtgctgaagccctccatgcacatgggtacagt
aacgaggcatgcaggctggctgtggagctggctagagaccttttggccaaccctccagat
ttgaaagtggagcagccacagactaagggaaagaagagcaaggtgtcaaccacccgccag
acacaggtagccactaagacactgtcaaaagctgccttcctcctgacagttctcagtgag
cgactggaactccataatctggccttcaacactggcatgttctcactggaactccagaga
ccaccagcatctaccaaagctctagaggtgaagctggcctaccaggagtcagaggtggtt
gctctgttgaagaagatccctctgggtctgatagagatgtccgccatcagagagcgagca
gagcagctccgggatggaaacttttgtgattacagacctgtgctacctctcatgttggcc
agcttcatcttcgatgtactgtgtaccccagttgtgtctccaacgggttcccgtccacca
agccgcaaccgcaacaatgagatgcctggagatgaggagctgggttttgaggctgctgtt
gctgcacttggtatgaaaaccacagtcagcgaggcagagcatcctctgctatgtgaagga
actagacgagtgaagggtgacctggccctggctctcatgatcacctataaggacgaccag
agcaagctcaagaagatattggataagctattggacagagagagtcagacccacaagccc
caaactctaagctccttctactcaagcaagccagcagctggcagtcagcgtagtccatcc
aaacatacatcctccagccacagtggagtgggtggggccacaggagtggtctccaaacat
gctacgtcatcttcctcagcatctactttggtggcttcatcctcaagctcttcctctgct
ctgacaattggcggagagggggtggctcctcaggctgatctgaacccagtgccaaataac
acagcaggggagagtgccgctgagaccagggagcatgatgggccttcatcttcaagtgac
cagcagaatgacatcgcttcatttaaggaggccacagtgcccagtcggttggcactgggg
gcacgctgtggatatagtcaacgctgctggggctcacctgtacggcagaagaaaaaacac
actggtatggcgagtattgatagcagtgctccagagaccacctcagacagttctcctact
ctcagtcggcggccaatgcggagcggctgggcagcagcgtcttgggggcggggtcaggac
agcgacagcatcagtagttcatcatctgattctttaggctcctcctcctccagtggctct
cgcagagcaggaggtggggccagagccaagagcacggacacaagcaggtacaaaggacga
cgtcctgagtgtcatgccccccatgtccccaatcagccctcagaagcagcagctcacttt
tactttgaactggctaagactgtgctgatcaaagctggaggaaactcctccacctccatt
ttcactcagccctcagccagtggggggcaccaaggtccacatagaaacctgcacctatgt
gcctttgagattggcctgtatgctcttggcctccacaatttcgtttcacctaactggttg
tccaggacctattcctcccacgtgtcctggatcacgggccaagccatggaaatcggcagt
gctgccctcaacattttggtggaatgttgggatggtcacctgacccctccagaggtggca
tcccttgcggaccgagcatcgcgagcaagggaccccaacatggttcgggcagcagcagag
ctggccttgagctgcttgcctcatgctcatgccctcaatcctaatgaaatccaaagagct
ttggtgcagtgtaaagagcaggataatgtcatgctggagaaggcctgcatggcagtagag
gaagcagctaagggtggaggtgtctaccccgaggttctgtttgaggtggctcaccagtgg
tactggttgtatgagcagtcagtaggtggaggatcaagccaacaacgggaaacatccggc
cgatgtggggcaaacggcggttcgggcaggaggcccccagagtctaactgtggtgttctt
gacagtggagtcaacatggagtctccaggggtagcaacagtcacagcttccgtcactgca
gccgctgtcgtaccagttatctctgtagggtccaccatttaccaatcccacgctatgcct
ggccaggctatggctcacccccacaccccgggcctccacccatacaccactatccaggcc
catctccccaccgtctgcacgccccaattcctagggcaccctctgcagcatgtcccccgg
cccaccgtcttccctgtgtctggggctgcatatccacagggaatgcacccagcattcatt
ggtgcccagtatccattctcagtggccactggcccccagccatcaatggcagccacggct
gtcgccttccctggtgttcctgtaccgtccatgactcaaattgctgtccacccctaccac
actgaggctggtctgccactcagcaccactgtagcagttggtggtgttcaccctggcccc
accatccaggccatccagggagcatctctgccctctctatcctctcagcctgcctccttg
gtcagcagtcctttcccagcagaagatgagcagcacagccagcccattagccaacaaggc
ctgcactacttgcattctgcttatagagttggcatgttggcattagagatgttgggcaga
agggctcacaatgaccatcccaacaacttctccaggagccctccttatactgaggacgtc
aaatggttgctgggacttgctgccaggctaggagtcaactatgtgtaccagttctgtgtt
ggagcagcaaaaggcgtcctcagtccatttgtcctgcaggagttaatcatggaggccttg
caaaggctgaaccctgcccacatccatgcccatcttcgaacacctgctttccaacaactt
gtccagcgctgccagcaagcctatctgcagcatattcaccaccggctcatccacctgaca
cctgctgactacgatgactttgtcaacatgatccgcagcgcaagaggtgctttctgtctg
actcctgtgggtatgatgcagtttaatgatgtgctgcagaacctgaaaaggggcaaacag
accaaggaactatggcagcgtatatccctggagatggcaaccttctctccgtga
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integrated database retrieval system
