Maylandia zebra (zebra mbuna): 101477643 Help Entry 101477643         CDS       T02814                                  Symbol rad50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism mze  Maylandia zebra (zebra mbuna) Pathway mze03440   Homologous recombination mze03450   Non-homologous end-joining mze04218   Cellular senescence Brite KEGG Orthology (KO) [BR:mze00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     101477643 (rad50)    03450 Non-homologous end-joining     101477643 (rad50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     101477643 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:mze03032]     101477643 (rad50)    03400 DNA repair and recombination proteins [BR:mze03400]     101477643 (rad50) DNA replication proteins [BR:mze03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     101477643 (rad50) DNA repair and recombination proteins [BR:mze03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      101477643 (rad50)     BRCA1-C complex      101477643 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      101477643 (rad50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_21 AAA_15 SbcC_Walker_B SMC_N ABC_tran zf-met AAA_29 AAA_13 AAA_16 AAA_22 Motif Other DBs NCBI-GeneID:  101477643 NCBI-ProteinID:  XP_004550391 UniProt:  A0A3P9B013 LinkDB All DBs Position LG10:19354443..19386091 Genome browser AA seq 1312 aa AA seqDB search MSKIDKMSILGVRSFGIEDKDKQVISFFTPLTVLVGPNGAGKTTIIECLKYATSGELPPG SKGGAFVHDPKDAHETDVRAQIRLLFSDVNGEKVTIQRSMSCTQKAKSYTFKSLEQVITR WKDGEKVSLSSKCGELDREMISALGVSKPVLNHVIFCHQEESNWPLSEGKALKDKFDSIF AATKYIKALETMRQLRLKQSQTVKECQVELRYLKQNKEKAQQIRETVDTKEAQLMASKAS VQQIENQIEPLENRLMDIDLKLGKVMKLDNEIKALDSRKKQMEEDNKELEETMEQVFQGS DEELQDIYQNHQGTVREKERRLTECQKELERAGRECQRLNRIKAELLGEQGRLQSEADHH TQNIRKRDTQVRSLSTYLEMEGYDRPPFTALQLESFHRHVTQRLEQEKGTLGQVMVDLQE KEQQKQQSIDEMRDKKTGLERTVELKRDMQGKKQQELRSVRAELQRLEGSSTRLQDLENE LAKVERELQSAIQNSNVEELKAEVSELQREKAELDRKQRRLDQEMETLNTHMTARTEMDM LKKNKGEKEEQVRKFKSRHSEDLVSLLGHFPNKRELEDWIYSKSKEINSTRNRLAKLNKD LASSEQNKSHISAELRKKEQQLTSDEEKFFNVCGSQDLDQDLGKLQEDLEKISKQRAMLA GATAVYTQFISQLTEDREPCCPVCQRTFPSESDLQEVINDMQSKLRLVPDKLKNTEQDLK RKERKKDEMMALKPVRQSIVQLQEKELPELKNRLQTVNREIERLKGDVEEQETLLGTLMS EEETAKACLQDISLMDRYLMDLKDVERKIAQHAAKLQGVDLTRTTQQVSQEKQETQHKLD TTSSKMELKRKLIQDQQEQIQMLRSAVNETRAEKLQLSSDMQKQQQLEEQCAEFTTEIQS LTRDIREAKEQLSPLSATLEKLQQEKQELLERKRQKQEEGQEKISSIKEKLKAITTLEKD ITKYVDEGKDEYKEQKESELHETNTQLHEAEKHKEKINKEMGNIRQDIDTQKVQERWLQD NLTLRKRVEELKEVLGKREALMKDMGNMQVMQLRKERREAERKLEDLKRNRSIALGRQNG FEEEILHYRKELREDQYDKADERYRNKMITMRTTELVIKDLDLYYKALDQTIMKFHSMKM DEINKIIRDLWRSTYRGQDIEYVEIRSDVDENSSAGVRRRVYNYRVVMVKGDTALDMRGR CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQR NFQLLIITHDEDFVELLGRSSYIEHFYRIRKNQDQNSEITKCSINSLSSYLH NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atgtcaaagatcgacaagatgagcatcctgggggtgaggagctttgggattgaggataaa gacaaacaagtcatctctttcttcactcctctgactgttctggtcggacccaatggagca gggaaaacaactattattgaatgcctaaagtatgcaacatctggagaacttccccctgga tctaaaggaggtgcatttgttcatgatccaaaggatgcccatgagacggatgtgcgtgct caaattcgcctcttattctcagatgtcaatggagagaaagtgaccatccaacgctctatg tcatgcactcagaaggcaaaaagctacaccttcaaaagcttagagcaggtcattaccaga tggaaagatggtgagaaagtcagcttgtcttctaagtgtggtgagctggaccgggagatg atttctgcattgggtgtgtcgaagcctgtcctaaatcatgtcatcttctgccaccaagaa gagtctaactggccccttagtgagggaaaagcactcaaagacaaatttgactccattttt gctgcaaccaagtatatcaaagctctagagacaatgcgtcagctgcgactcaaacagagt cagacagtcaaagagtgtcaggtggagctgcgctacctgaagcagaacaaggagaaggcc cagcaaattcgagaaactgtggacaccaaggaagcccaactgatggcctcaaaagccagc gtccagcagatagagaaccagattgagccgcttgagaatcgactgatggatattgacctt aaactcgggaaagtgatgaagctagataatgagatcaaggctttagacagcaggaagaaa cagatggaggaggacaataaggagctggaggaaacaatggagcaggtgtttcagggttca gatgaggagctgcaggacatttaccagaaccaccaggggacagtgagggagaaggagcga aggctgaccgagtgccagaaggagctggagagagctggcagagagtgtcagagactcaac agaatcaaagctgaacttctgggtgaacaaggtcgtctacagtcggaagctgaccaccat acacaaaacatcaggaaacgtgacactcaggttcgctctctgtcaacctacctggagatg gagggctatgaccgaccacccttcactgctcttcagcttgagagctttcatcgtcacgta acgcagagactggagcaggaaaaagggacacttggccaagttatggtcgatctgcaggaa aaggagcagcagaagcagcagtctattgatgaaatgagggataagaaaactggcctggag agaacagtggagctgaagagagacatgcagggaaagaagcagcaagaactgaggagtgtc agagcagagctgcagaggctggagggttcgtctactcgactgcaggatctggaaaatgaa ttggctaaagtggagcgtgagctgcagagtgcaatccagaactccaacgtggaagagctg aaggctgaggtttcggagctccagagagaaaaagctgaacttgaccgcaaacagagacgg ctagatcaagagatggagacgctcaacacacacatgactgcacgcacggagatggacatg ctgaaaaagaataagggcgaaaaggaggagcaggtacgcaagttcaagtcccgtcacagt gaggatctggtgtccttactgggccactttcccaacaagagagagctggaggactggatc tattccaagtccaaggaaattaacagcaccaggaacagacttgcaaaactcaataaggac ttggcttcaagtgagcagaacaaaagtcacatttctgctgagctgcgtaagaaggagcag cagttaaccagtgacgaagagaagttcttcaatgtgtgtggtagtcaagatctagaccag gacctgggcaaactgcaagaagatctggagaagatatccaaacaaagagccatgctagct ggagccacagcagtgtacacccaattcatcagtcagctgacagaggacagggagccctgc tgcccagtgtgccagcggacgttcccctctgagtctgatctgcaggaggttatcaacgac atgcagtcgaagttacgcctggtgccggacaaactgaaaaatacagagcaggacctgaag aggaaggagaggaagaaagatgagatgatggctctcaaacctgtgagacagtccattgta cagcttcaggaaaaggagctaccggagttgaaaaaccgtctacagactgtaaatagagaa attgagaggttgaagggtgacgtggaggagcaggagactctgcttggcacgctgatgtct gaggaagaaactgccaaggcctgcttgcaggacatttctctcatggacagatatctgatg gaccttaaggacgtggagaggaaaatcgctcagcatgcagcaaaactccaaggagtagac ctgaccagaaccacacaacaagtcagtcaggagaaacaagaaactcagcacaagttagac accacttccagcaagatggagttgaaacgtaagctgatccaggaccagcaggaacagata cagatgcttagaagtgcagtgaatgagacacgagcagaaaagctccagctgagcagtgac atgcagaaacagcagcagctggaggagcagtgtgccgagttcaccactgagatccaatcc ttgaccagagacatcagggaggcaaaggaacagctgtcccctctgtctgccactctggag aagctacagcaggagaaacaagagttgctggagcgcaagaggcagaagcaggaagaaggg caggagaagatcagctccattaaagagaaattaaaggcgatcaccactttggaaaaagac atcactaaatatgtcgatgagggcaaagatgaatataaagagcaaaaagagtctgagctc catgaaactaacactcagctccatgaagctgagaagcacaaggagaaaattaataaggaa atgggaaacatccgtcaggacatagacactcaaaaggtccaggagcgctggttacaggac aacctgacattgagaaaacgtgttgaggagttgaaagaagttctgggtaaacgtgaggct cttatgaaggacatgggcaacatgcaagtcatgcagctacgcaaagaacggcgtgaagca gagcgcaagctggaggatttgaaaagaaaccgcagtattgcattgggccgacagaatggc tttgaggaggagatactgcattataggaaagagctgcgagaggatcagtatgacaaagct gatgagcgctacagaaacaagatgattacaatgaggaccacagaactggtcatcaaggac ctggatctctactacaaggctcttgatcaaaccatcatgaaattccacagtatgaagatg gatgaaatcaataagatcatacgagacctatggcgcagcacctacaggggtcaagatatt gagtatgtggagatcagatctgatgtggatgagaattcatctgctggagtgaggcggagg gtttacaactacagagtagttatggtgaaaggagacacagctctggatatgagaggacgc tgcagcgctggccaaaaggtactggcatcgctgataatccgtctagctctggcagagacg ttctgtctgaactgtgggatcctagctctggatgagcccacaaccaacctggaccgagag aacatcgagtcactggcacatgcccttgtagaaatcattaagagtcgctctcgccagcgc aacttccagctgctgatcatcactcacgacgaggactttgtggagctgctcgggcgatcc agctacattgaacatttctatcgtatccgtaagaaccaggatcagaactctgaaatcaca aagtgcagcatcaattccctctcatcctatcttcactga

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