Maylandia zebra (zebra mbuna): 101477882
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Entry
101477882 CDS
T02814
Name
(RefSeq) afadin isoform X5
KO
K05702
afadin
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04517
IgSF CAM signaling
mze04520
Adherens junction
mze04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101477882
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101477882
04530 Tight junction
101477882
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DIL
PDZ
RA
PDZ_6
PDZ_2
RA_3
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
101477882
NCBI-ProteinID:
XP_004540113
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All DBs
Position
LG19:complement(15279954..15299817)
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AA seq
1233 aa
AA seq
DB search
MPEEDEQDKLGKVIRQWNNNRLDLFEISQPDENLEFHGVMRFYFEDPAEGNVATKCLHVC
SNSVTREIIDMLSEKFRPDMKMLTTSYALYEIHNNRERKLDLNERPLVVQLNWNSANREG
RFVLKKDKDSVEEKFEEKEKGGFIQNFKRTLSRKGKKKERNSNTDDKASEDENGPAESSL
NNDSICLSNIDAQKFCTEKKRPQRQAAADQAGLPIGVQFSDNFAEPFLCAVINYTNSSTV
HFKLSPAYVLYATCRFALQRRYGQDSRTSEHADSVTSISNKMVSMTGKVIQRQQTIGGAL
AFWMANSSELLNFLKHDQDLSPLTQQSQLDLSHLVHKAYSCLLQCLQNELRKHLPTFLID
PEQYGSLPAGIGAEMVLNTLMNTMSLLRRCQVNPALTIQLFSQLFHYISVWLFNQLMSPE
ASTPGLRSHYWGAALRQRLTTIEAWAERQGLELAADCHLGHIIQATTLLTMNKYSMQDAK
DIQTTCFKLNSLQLHMLLAGYLYATNEPHIPPDLINAVVTAAEASADNLIRSEGQDIQLQ
ESLDLHLPFLLPEGGYSCETVRGIPQGFREFLEPMCQKGLCSLTPQPNSKGDWTIYFSES
DPSVESTYLAAHRQPEIMTITLNKPLNSGMGVSIVAAKGAGQCTLGIYIKSIVKGGPAEM
NGQLTAGDQLLSVDGQSLVGLSQERAAAIMMQTGPIVTLQVAKFAASYHGLEALLRESTP
EKTTGERDHAKPNNKACIKYSTEDHSPSEQLHGGNRRKKQQIMQRNRQFYRSNPNMAADF
CLEDGDKLVDPFTGKSTASLSTKNLCSDKFHWEYLTLPNPRSQDRNVSEPSKPQQTFQVS
LKPLAGQSSNRSLNVMRQALSQENLCTDSGRPLLDKSQSKWTQKDQGAKQTENYCTSFPI
RSCLSTHDILSDNSSPTNQQQVSRVSCAGVWRTPFSQHSTSTPSIQPIRIDIPLTRAASH
QSNPPLTTFQQSSSSLAVKMSRTLQINGHKQNPQSQASSTSACPVSPTKKLLQPSLSSQK
LNRHRDQVAKPQVSITPTKHVSFQEPPCSQKKSTGPMKQKDPLDMSDPWKREAQEKLEKQ
QRLEAVEFLQQEMQELQAKAKRTAEENDRLRKLNLEWQFQKRLQEIQQRGDDEDEDNDLD
MMVMIQQLENSMSQAKNNTRSSSGKDKTEKQTGTHLSKKEDEEKRAQRLSGLAHDVHQAA
SKENQEEKMKRASAPEKLTFKERQRLFSLASSS
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagaggacgaacaagataagttagggaaagtcatcagacagtggaacaataac
agactggacttgtttgaaattagccaacccgacgagaatctggaatttcatggcgtgatg
cgcttctacttcgaggaccctgctgaaggcaacgtagccacgaagtgtctgcacgtctgc
agcaactcagtgactcgtgagatcattgacatgctgtcagagaaattcaggcccgacatg
aaaatgctgactactagttatgccctgtatgaaatccacaacaacagggaacgcaagctg
gatctgaatgagagacctttagttgtgcaattaaactggaactcagccaacagagaagga
cgctttgtgctcaagaaagacaaggacagtgtggaggaaaagttcgaggagaaagagaaa
ggaggcttcatacaaaactttaagaggacgctgtcaagaaaaggaaagaagaaagagagg
aacagcaacacagatgacaaagcttcagaggatgagaatgggccagctgaaagttcactc
aacaatgacagcatttgcttgtctaacattgatgcacagaaattttgcacagaaaagaaa
agaccacagaggcaggctgctgcagatcaagctggattaccgattggcgttcagttctct
gataactttgcagagcccttcctgtgtgcagttataaattacaccaacagctccaccgtt
cacttcaagctctcgcctgcatacgtcctctacgccacgtgccggtttgctctacaacgc
cggtacggtcaagactctcgaacctcagagcacgcagacagtgtaacctcgatcagtaac
aaaatggtgtcgatgacagggaaggtcatccagaggcagcagaccattggaggggctctc
gccttctggatggccaactcctctgagctgctaaacttcctcaagcatgaccaagacctc
agcccactgacacagcagagccagctggacctgtcccacctggtgcacaaagcctacagt
tgtctgctacagtgtctgcagaatgagctgaggaaacatttgccaacctttctgattgat
cctgagcaatatggttccctgccagctggtataggtgcagaaatggtgcttaacactttg
atgaacaccatgtctctgttgcgccgttgtcaggtcaaccctgccctaaccatccagctc
ttctctcagctctttcactacatcagcgtctggcttttcaatcagctcatgagccctgaa
gccagcaccccaggcctgcgctcccactactggggagctgctctccgtcagaggctcaca
accatcgaagcctgggcagagagacagggcctggagctggcagctgactgccacctgggc
cacatcatccaggcaaccaccctcctgaccatgaacaagtactcaatgcaggatgcgaag
gacatccagacaacctgtttcaagctgaactcactgcagctgcacatgctgctggctggc
tacctctatgcaaccaatgagccacacatcccccctgatttgatcaatgctgtagtgaca
gctgccgaggcctcagcagataacctgattcggagcgaaggacaggacatccagctgcag
gagagcctcgacctccacctgcccttcctgctgccggagggaggatactcctgtgagact
gtgagaggaatccctcaggggtttagagagtttttggagccaatgtgccaaaaaggtctc
tgctctttaacaccccagccaaactccaaaggggactggaccatttatttcagcgaatct
gacccttctgtagagagtacatatttggcagcacataggcagccagagattatgacgatc
acactgaacaaacctttgaacagtgggatgggggtcagcattgtagctgccaagggagct
gggcagtgtaccctcgggatctatattaaatccatcgtcaagggaggaccggctgaaatg
aatggccagttaactgctggagatcagctgctcagtgtggatggtcaaagcctggttggt
ctcagccaagaaagggcagcagcgatcatgatgcaaactggccccattgtgaccttacag
gttgcaaaatttgcagcgagttaccacggcctagaagccctgctgagagaatccacccca
gagaagactacaggggagagagaccacgctaagccaaacaataaagcctgcataaagtac
agcacagaggaccacagtccctcagagcagctccatggaggcaatcgaaggaagaaacag
cagataatgcagaggaacagacaattttatcgctccaaccccaacatggccgcagacttt
tgcctggaggatggcgataaacttgttgaccctttcacaggaaaaagcaccgcttctttg
tccactaaaaatctttgctctgataaattccactgggaatacttgacactaccgaaccct
agatcccaggacaggaatgtatctgaacctagcaaaccacagcaaactttccaagtgtct
ttgaaacctttagctggacagagctccaatagatctctaaacgtcatgcgccaagccctc
tctcaggagaacttgtgtacagacagtggacgccccctgctggacaaaagtcagagcaag
tggacacagaaggatcagggtgcaaagcaaactgagaactactgcacgtctttccctatc
cgctcttgtctttctactcatgacatcctctctgataacagctcccccacaaatcagcag
caggtcagccgtgtaagctgtgccggtgtctggagaacccctttttcacaacactcaaca
tccacaccttcaatccagccgatacgcatcgacatccccctaacaagagcagcaagccac
cagtcaaatcctccactcactactttccagcagagttcttcgtcgctggcagtgaagatg
agtcgaactcttcaaatcaatggacacaagcagaatcctcaaagccaagctagtagtact
tctgcatgtccagtatctccaactaagaagctacttcagccctcactttcatcacaaaaa
ctcaacaggcacagagatcaagtagcaaaacctcaagtgagtatcactccaacaaagcat
gtttccttccaagaacctccctgttcacagaaaaagagcacaggtccaatgaaacagaaa
gaccctctggatatgtctgatccttggaagagggaagcccaggagaagctggagaagcag
cagaggcttgaagcggtggagttcctgcagcaggagatgcaagagcttcaggctaaagct
aagcgcacggcggaggagaacgaccgactccgaaagctcaacctggagtggcagtttcag
aagaggctgcaggaaattcagcagagaggagatgatgaggatgaagataacgatttggac
atgatggtgatgatacagcagctagagaacagcatgtcacaggccaagaacaacacaaga
agctctagtgggaaggacaaaacggaaaagcagacgggaactcacctctccaaaaaggaa
gatgaagaaaagagagctcagcgattaagtggattagctcatgatgttcatcaagcagca
tcaaaagaaaaccaggaggagaaaatgaagagagcgtcggctcctgagaagctaacattc
aaggagcgccagcgtcttttttccttggcgtccagttcataa
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integrated database retrieval system
