Maylandia zebra (zebra mbuna): 101477998
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Entry
101477998 CDS
T02814
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03013
Nucleocytoplasmic transport
mze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101477998 (thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
101477998 (thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101477998 (thoc1)
03041 Spliceosome [BR:
mze03041
]
101477998 (thoc1)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101477998 (thoc1)
Spliceosome [BR:
mze03041
]
Complex C
Other components
EJC/TREX
101477998 (thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101477998 (thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
101477998
NCBI-ProteinID:
XP_004542907
UniProt:
A0A3P9DFR2
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All DBs
Position
LG18:complement(10896744..10906652)
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AA seq
654 aa
AA seq
DB search
MSPSSFNFVDAKDKFTASAVQALTGKSIKPLISIFNQIPGNEAEKKTTLDQALRGVLGDL
IVEQKARCDDYLALIYLSIDGVTEGICSATTPFVLLGDVLDCLPLDLCDKIFSFVEENVS
TWKSNSFYTAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQF
NLDNITVFNKNEQESTLGQKHTEEKEDGMEVEEGEMGEDDGPAPSSIPIDYNLYRKFWTL
QDYFRNPVQCYDKFSWMTFLKFSDETLAVFKSYKLDDMQASKRKLEELRASSGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSSCVLNDDQAAWIEETTKLV
YQLLREIPPDGDKFAAMVEHILNTEENWNAWKNEGCPSFVKERTVDDKPKRLTRKRQAPE
DFLGKGPDRKIFMGNDELTRLWNLNHDNMEACKSDSREFMPSLDEFFAEAIEQADPANMV
EEEYKVVRNANYGWRALRLLSRRSPHFFQPTNQKFKSLADYLDSMVSKLAKELPKDIPSE
EIKTGEEDDDDNGDNLLKDSNDSPSIQSKLVTNQQMDDVAAKLGAQWKNLASHFEMKAAE
LREIETDSEDVDMQAKLLLVAWQDREGTQATVENLVAALNATGFSQIADGLSEA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgtcttcatttaattttgtcgacgctaaagacaaatttacggcgtctgccgtc
caggctttgactggaaaaagcatcaaacctttgatcagtatttttaaccagatccccggc
aatgaggcggaaaagaagacaaccctcgatcaggctctgaggggagttcttggtgatctg
attgttgagcagaaggcgaggtgtgatgactacctagctctcatttacctgagcattgat
ggcgttacagaaggtatctgttctgctacgacccctttcgtcctgctgggagacgtgctg
gactgtcttcctttggacctgtgtgacaaaatcttctcttttgtcgaagagaacgtctcc
acctggaaatcgaactccttttacactgcagggaagaattatttattgaggatgtgcaat
gatctcttaaggaggctgtccaaatcacagaacacagttttctgcgggcgaatccagctc
tttctggcacgtctcttccctctgtctgaaaaatcaggcctaaatctccagagccagttt
aatctagacaatataacagtgttcaacaaaaatgaacaagaaagcactctcggccagaag
cacacagaagaaaaggaggatggtatggaagtggaggaaggagaaatgggggaggatgat
ggccctgcaccgagctccattccaatcgactacaacctgtacagaaagttctggacactg
caggactacttcagaaatccagtgcagtgttacgataaattctcatggatgacattcctt
aagttctcagatgagactctagcagtattcaaaagctataagctggatgacatgcaggcc
tctaagaggaagctggaagagctgagagcatcaagtggagaacatgtttactttgccaag
ttcctcacaagtgagaagctgatggacttgcagctcagcgacagcaacttcaggcggcac
atactgctgcagtacctcatcctcttccagtacctgaagggtcaggtcaagttcaaaagt
tccagctgtgttctgaatgatgaccaggctgcgtggattgaagagacaactaaactggtc
tatcagctgctgagggagattcctcctgatggggacaagtttgctgccatggttgagcac
atccttaacacagaggagaactggaatgcctggaaaaacgaaggatgtccgagctttgtg
aaagagagaacagtagatgacaagcccaaaagactcacaaggaaaagacaagctccagaa
gacttccttggaaaagggccagaccggaagatttttatgggaaatgatgagttgacccgg
ctgtggaacctcaatcatgacaacatggaggcctgcaagtcagacagcagagagttcatg
ccgtcattggatgaattcttcgcagaagctattgaacaggccgacccagccaacatggtc
gaggaggagtacaaggttgtgcgaaatgcaaactatggctggcgggctttgagactgctg
tccaggagaagtccacacttctttcagccaacaaaccagaagtttaagagcctggcagac
tacctcgacagcatggtcagcaagttggccaaagagctaccaaaggacatcccatctgaa
gaaataaagacaggagaagaggatgacgatgataatggagacaatctgctcaaagacagc
aatgacagtccgagcattcagagcaaacttgtgacgaaccagcagatggatgacgtagca
gccaaactgggcgctcagtggaagaacctcgcttctcattttgagatgaaggcggcagag
ttgcgagaaatcgaaacggacagcgaagacgtcgacatgcaggccaaactgctgctggtg
gcctggcaggacagagagggaacacaagctactgtggagaacctggtcgcagctctgaac
gccacaggtttctcccagattgcagacggcctcagtgaggcttaa
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integrated database retrieval system
