Maylandia zebra (zebra mbuna): 101478303
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Entry
101478303 CDS
T02814
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101478303
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
101478303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1_C
UBA_N4BP1
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
101478303
NCBI-ProteinID:
XP_004573649
UniProt:
A0A3P9BJV9
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All DBs
Position
LG23:37003750..37022248
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AA seq
963 aa
AA seq
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MGQKDHVEAGSGHILDLGLDLEYLHVAGGDRQAGGADGPPAMEEQGESTAGSPPLTVLEE
NSGFDAEGESALTSSSTLAPGTDSDGGDGGSTHSKNTHQPLCRTQCVDLGTEGPPEPPSE
LLAELECDAHAQSTLGSPSEHLPEPPPSLSASEPGYEAGGKEYQAKLEFALKLGYSEETV
RLVLSKLGPDTLINDILGELVKLGTKSDSEQPAGLLASTSSSSSSSSSCGCSDLLEGQRP
DSPCHSDSLCDQDNLRPVVIDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHQDITVFVP
AWRKEQSRPDAPITDQDILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGII
VSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPVMPE
QKKQPCPYGKKCTYGHKCKYYHPERGAQPQRAVADELRASAKTCVVSKNQGDAGLVKSHS
VPAGSIDAKKGAPKRQSDPSIRALSYSDAEEKLLAKGRLEVQKNTVCGSSSSSSTSGSCG
GSVSMSPAPGGPPSTLGLPQEQQARPVMPHGHLPAPSHDLYPHCESPDLSYYSVTRAYTG
LSLSSRRSPDCRFPNDTDLRLGSAGSECSSESSVSCGSSCDLYSERQCPGCPPDPLLEDA
VHFPNPHSRLYSHHATSSHELCGLHPAEYTNIQHSHTPSTGLHPYHLSAAHGQSCAHDPP
PLEAPPKRPLYPLPPHLQHQPLTARSSCPGDYHSLPQSNPAPPGSPLGRCLAPTRAESVS
DSHLYEHLSTSHHRHRPKALPSWDKYYRQPPLPPSRYEPPTYQSLPDTRQSSWHTPPWTQ
DGYGQHHSSHPALHPSPTHYLSHPPPPAHSPCPPHPSSTPLPPYPPHSSHLTVPSHAPPS
YMSQHPESPSHSRYGDAREKVYINLCNIFPSELVSRVMARSPHITDPQQLAAAILAEKAQ
TGY
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagaaggaccatgtggaggcaggttcaggccatatcctcgacctggggctggat
ttggagtatctacacgtagcggggggtgaccggcaggctggcggcgctgacgggccccct
gctatggaggagcagggggagagcaccgctggctcccctccactgaccgtcctagaggaa
aacagtgggttcgacgcagagggcgagtcagcgttgacctccagctccaccctcgctccg
ggtaccgactcggacggaggagacggagggtcgactcacagtaagaacacccaccagccc
ctctgccggacccagtgtgtggacttaggcaccgaaggccctcccgagcccccatctgaa
cttctagcagagcttgaatgtgacgcccatgcccagtccacactcggctccccatccgag
cacctgcctgaacctccacccagtctgtctgcttcagagcctggctatgaggctggtggg
aaagagtaccaggctaagctcgagtttgccctcaaactcggctactccgaggagacggtg
cgactggtgctgtctaagctcggccctgacaccctaatcaatgacatactgggagagctg
gtcaagctgggcaccaagtcagacagtgagcagccggctggattattagcctctacctca
tcctcttcatcttcctcatcctcctgtggatgttctgatttgctggaaggccagaggcca
gactcaccctgtcattcagactctttgtgtgaccaggacaacctgcggccagtcgtgata
gatggcagcaatgtagccatgagccatggcaacaaggaagtgttttcctgtcagggcatc
cagctggctgtagattggttcctcgagcgcggccatcaagacatcacagtttttgtgcct
gcgtggcggaaagagcagtcccgacccgatgcccctataacagatcaggacatcttacgt
cgcctagagaaggaaaaaatcctggtgttcacgccttcacggcgtgtccaaggtcgacgc
gtggtctgctatgacgaccgcttcattgtcaagctggcctatgagtcagacggcattatc
gtctccaacgacaactacagagacctggctaacgagaagcccgagtggaagaagttcata
gatgagaggcttctcatgtattcctttgtcaatgataaattcatgccgccagatgaccct
cttggtcgtcacggcccgagcttagacaacttcctgagaaaaaggcccgtcatgcctgag
cagaagaagcagccttgtccatacggaaagaagtgtacttacggtcacaaatgtaagtac
taccacccggagcgaggcgcccaaccacagcgtgccgtggctgatgagctgcgtgccagc
gccaagacttgcgtcgtctcaaagaaccagggcgacgccgggctggtgaagagccacagc
gtgccagctggcagcatcgacgccaagaaaggcgccccgaaaaggcagtcggaccccagc
atccgagctctgtcatacagcgacgccgaagagaagctgctggccaaagggaggctggag
gtgcagaagaatactgtgtgtggcagcagcagtagcagctccactagcggtagctgcggt
gggagtgtaagcatgtccccggccccaggaggcccaccatccactcttggcctcccacaa
gagcagcaagcgagaccagtgatgcctcatggtcacttaccagcccccagccatgacctt
taccctcactgtgagtctccagacttaagctactattcagtaacacgtgcttacactggc
ctgagtctctcctccagacggagcccagactgtcgcttccccaatgacacagacctgcgg
ctgggctcagctggctccgagtgcagcagcgaaagcagcgtcagttgcggcagcagctgc
gacttgtacagcgagaggcagtgtcccggatgccccccggaccccttactggaagacgct
gtccattttcctaatccccacagccgactgtactcccatcatgccacatctagccatgaa
ctttgtggcctgcatcctgccgaatacacaaacattcagcacagccacacgccgagcaca
ggactacacccttaccacctgagcgccgcacacgggcagagctgcgctcatgatccgcct
ccactagaggctcccccaaagcggcccctctaccccctgccccctcatctccagcaccaa
ccgctgaccgcacggtccagctgcccaggcgactaccactctctgccgcagtccaacccc
gcaccccctggctcaccccttggccgctgcctggccccaacgcgagcagaaagtgtgtcc
gactcacacctgtacgaacacctctccacatcacaccatcgccaccgaccaaaagccctg
cccagctgggacaagtactacaggcagccaccgctgccgccgtccagatacgagccgcct
acctaccaaagcctgccagacacacgccagtcgtcctggcacactcctccatggacacaa
gacggctacggccagcatcactcctctcacccagctctccacccatccccaactcattac
ctcagccacccaccgcccccagcccactctccttgcccgcctcatccatccagcacccct
ctcccgccgtacccacctcacagctctcaccttaccgtgccgtctcatgcccctccctcc
tacatgtcacagcacccagaatccccttcgcacagtcgctacggcgatgcgagggagaaa
gtgtacataaacctgtgcaacatcttcccctcagagctggtaagccgggttatggccaga
agcccccacatcacagacccccagcagctggcagctgccatccttgcagaaaaagcccaa
acaggctactga
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