Maylandia zebra (zebra mbuna): 101478365
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Entry
101478365 CDS
T02814
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mze04040
]
101478365
Ion channels [BR:
mze04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
101478365
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
GAS
Motif
Other DBs
NCBI-GeneID:
101478365
NCBI-ProteinID:
XP_004567752
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Position
LG7:14999373..15016620
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AA seq
1193 aa
AA seq
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MERFQSSMRKRLYSLPQNIGQKPFVTDEGENGDKDTKRKSIGLKHLSSLSPASSCKSIGE
AGVEDFERDVTVKTNLNGDCRFFRGSISSISGRHPPGSDLAEQRRLIPEADAGVNESFPG
EHGPGALQRATGGLTGIVGQPSLFDQSTFIKLEGSEQIIPEDERLYQAGFMHRQFGAMLQ
PGVNKFSLRMLGSERAVEHERERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVG
ITFFKDEHTPPWIVFNVVSDTFFLMDLVLNFRTGIVKEDNTEIILDPHQIKIKYLKSWFV
VDFVSSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEE
VFHMTYDLASAMVRIMNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVTRNKMVNDTWGQ
QYSYALFKAMSHMLCIGYGLYPPIGMADVWLTILSMIVGATCFAMFVGHATALIQSLDSS
RRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILEELNEPLREEIIN
FNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVL
TKNSKDTKLSDGSYFGEICLLTRGRRTASVRADNYCRLYSLSVDHFNEVLEEYPMMRRAF
ETVALDRLDRIGKRNSVLQHKVQHHQSSGTLNLHESEIIQRIVQHDRDMAQCTQLNQTST
VPSINRPPAPPSPTPVIWAPLVQAPLQAAAATTPLAMALAHQSQLPPILFHHPLVPRPGS
VKDPSSYSKRVHVGASASSSCGSGPNSPTSSANLRSEVETATLVFPRTQLLSSGPLSPIL
TSQPIFTSSLQPLAPLHTHQPLLHPPHSGMASVFPISQATVSYTCSAQLHSQPFHGAMTT
PPRPIGLLQQGAPGRLAGRFPAPSATTLTPLISSSVGPILSQLQQTSHITSQQVGSSSDR
ASRRTSGLNLPHFPFITNTQSSAGFNQPVSAVGAGAAASLAQHSLAGLQSVFLPQVLPEH
SALASLAQYGSAEASPCYTPPVHSPSIQSPVRGRTVCHSELPSTADSHSPLTLQTSCPAR
VACTLRQRAESSVDLFSQEIKTISGSHSSIHQERPLAISSSSEGVAGAPSPFSSPMAVSK
PYTPIPGQATPVSRTHSGPEPQHQSVGFHSSPIRSPAKMLEKEHKQSKLPSNL
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggagagattccagtcctccatgcgcaaacggctctacagcttgccgcaaaacattggg
caaaagccctttgtgactgacgaaggggagaacggcgacaaggacactaaaaggaaaagt
atcgggctcaaacatttgtcctctctgtctcccgcgagcagttgtaagagcattggggag
gccggggtcgaagactttgaaagggacgtcaccgtgaagaccaacttgaatggggactgc
cgcttttttaggggcagcatctcttccatctccggacggcatccccccgggtcagatttg
gcggagcagaggcgcctcattcccgaggctgatgctggagtcaacgagagtttccccggt
gagcacggccccggggccctacagcgggcaacgggtgggctgaccggcatagtcgggcaa
ccgtcactgtttgaccagtcaactttcatcaagttggagggctctgagcaaataataccc
gaagatgagcgtctctaccaggctggcttcatgcaccggcagtttggggcgatgctccag
ccgggagtcaacaagttctccctgcggatgttgggcagtgagagggccgtggaacacgaa
agggaacgcgtgaagtctgcaggcttctggataatccatccctacagtgattttaggttc
tactgggatctgacaatgctgctgttgatggtgggaaacctcatcatcatccccgtgggc
atcaccttctttaaggacgagcacacgccgccctggatagtctttaacgtcgtgtcggac
accttcttcctcatggacctggtcctcaacttccgcacgggcatcgtcaaggaggacaac
acggagatcatcctggacccgcatcagatcaagatcaagtacctgaagagctggttcgtg
gtggacttcgtctcctccatacccgtggactacatctttcttatcgtggagacgcgcatc
gactcagacttttacaagacggcccgagctctgaggatcgtccgcttcacaaagatcctc
agtctgctacggctgctgcgcctctccagactcattcgctatatccaccagtgggaagag
gttttccacatgacatacgaccttgccagcgccatggtgcgtatcatgaacctgattggt
atgatgctactgctgtgtcactgggatggctgtctgcagtttctggttcccatgctgcaa
gacttccccccagactgctgggtcaccaggaacaagatggtgaatgacacctggggtcag
cagtactcctacgccctgttcaaggccatgagtcacatgctgtgtatcgggtatggcctg
taccctcctatcggcatggctgacgtgtggctcactatcctcagcatgatcgtgggtgcc
acctgctttgccatgtttgtggggcatgcgactgcactcattcagtctctggactcctcc
aggaggcagtaccaagaaaagtacaaacaagtggagcagtacatgtccttccacaagctt
cctgcagacatgcgtcagaggatccacgactactacgaacaccggtatcagggcaagatg
tttgacgaggagagcatactggaggaactgaatgagccgctgagagaggagatcatcaac
tttaactgtcgcaaactggtcgcctccatgcccctgttcgccaacgctgatcccaacttc
gtcacctccatgctaaccaaactacgctttgaggtcttccagccgggcgactacatcatc
agggaggggaccatcggcaagaagatgtacttcatccagcacggcgttgtcagcgtcctg
accaagaacagcaaagacaccaagttgtccgatggctcttattttggagagatctgcctg
ctgacccgaggcaggaggactgccagcgtgcgggcagataactactgtcgactgtactct
ctgtctgtagaccacttcaatgaggtgctggaggagtatcccatgatgaggagggcgttt
gagactgtggcgctcgatcgcctggatcgcatagggaagaggaactctgttcttcaacac
aaagttcagcatcaccaaagttctggcacactaaaccttcatgagagtgagatcatccaa
agaatagtgcaacacgaccgcgacatggcccagtgcactcagctgaaccaaaccagcact
gtgccgagtataaaccgtccgcctgctcctccgtcacccaccccggtcatctgggccccg
ctggttcaggctccgctccaggctgcggctgccaccaccccgcttgctatggccttggcc
caccagtcccagcttcctccaatcctcttccaccatcctctggtgccacgtcccggctct
gtgaaggacccctccagctattcaaagagagtacatgttggagcgagtgcctccagtagc
tgtggttcagggcccaattctcccactagctctgccaaccttagatctgaggttgagact
gccacactagtattccccaggacacagctactctccagtgggccgttgtcacccatactg
acgtctcagcccatcttcaccagcagcctgcagcccctcgcccctctgcacacacaccag
cctctgctccatcctccccactctggcatggcgtcggtgtttcccatcagccaggccacc
gtctcttacacctgctccgctcagctccactcccagccgtttcacggtgctatgaccacc
ccaccacgaccgataggtttactccaacagggggcaccagggaggctagcagggagattc
ccggccccctcagccaccacattaacccctcttatttcaagctcagtcggccccatactg
agccaattgcagcaaacctcccatatcacctcacagcaggtggggtccagcagtgacaga
gcaagcaggagaaccagtggcctgaacctcccacattttcccttcatcaccaacacccag
tcctccgctggatttaatcagccagtgtctgcagtcggagccggggccgcagcctctctg
gcccagcacagcctggcaggactccagtctgtttttctcccgcaggttctcccagagcac
tcagcccttgcctccctggcccagtatggctctgcagaggcctcgccttgctacacgcct
cctgtccacagtcccagcatccagagccctgtgaggggaaggacagtatgccacagtgag
ctccccagcactgcagactctcatagtcctctaacccttcagacctcatgccctgccagg
gtggcctgtaccctcagacagagggcagagtcctcggtggatctcttttcccaggaaata
aagactatctcaggctctcacagctctatacaccaggaaaggcctttggccataagcagc
tcctctgagggtgtagcaggggcgcccagccccttctcctcaccgatggctgtcagtaaa
ccctacaccccgatcccgggtcaagccactcctgtcagtcggacacattcagggcctgag
cctcagcaccagtccgttggttttcactcttctcccattagatctcccgctaaaatgtta
gagaaggaacacaaacagtccaaactcccgtccaatttgtga
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