Maylandia zebra (zebra mbuna): 101478690
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Entry
101478690 CDS
T02814
Symbol
limch1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mze04990
]
101478690 (limch1)
Domain-containing proteins not elsewhere classified [BR:
mze04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
101478690 (limch1)
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Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
101478690
NCBI-ProteinID:
XP_004553740
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All DBs
Position
LG2:complement(6896727..6981211)
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AA seq
1359 aa
AA seq
DB search
MASPVADIGQSHQHHPVNESAAQSAFLEAQKWIEAVTGRCFGEKDFRGGLENGILLCELL
SSIRPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQDTSTRPTAKGSD
GSRKLKNVLITIYWLGRAANSCTSYNGPTLDLKEFEGLLSQMRKETEEAESPKRSIRDSG
YIDCWDSERSDSLSPPRHGREDSFDSLDSFGSRSRQTPSPDVLVARGSSDGRGSDSESDG
APHRKMPDVRKDDMLARRTSVSEPRTAVPFNQYLPNKSNQSGYLPTPLRKKSNDKEEGGR
KSWSTATSPVGGDRPLSLNEVCSLEIPPGESPSPSPTLPLKPCTQIQKENHIKKDKHEGR
QSASPPCIEIHTAGKRRRSEPLPSSLPQPQAEPPRETVIHLMVTSEQSTPARSCSEEFFH
HSSTLAANATAASVFQTSPINTAGKHSPVTHQEDVAIRKGVPGSLVAADAKGDDKQACQI
PTSPKCIVTLSPSSFLPVPTAMATASTETTDTCRQKGKPQTEMDEGTSWVDSSLPAKSVS
MIDMRGEEEATLQPHSQVRHERMHNQYNKMKEEEDHWQDDLARWKSRRRSISQDLIKKEE
ERKMMERLMSGDTYTSQRRRSIKTYREIVEDKERREEDLRQAYKKAKTPEEATAILQRYA
QRFSISETVLERLQLPKLLDRSISADPSFPTSPFPLSLSLSASPTTPDPFDSDFNGPMRY
LRQQSAPTPKFTSTFEARIEEFPKEPSSHQRSQIRSRSSEPPSTRALSPKPVPLLMPKPY
FQARPAGGETWNNKVDGLLRVNGDVGSDDVPTTPESQGRDSPPHFQASPSQSKNSTVDGA
VDVPLSETSLPHSTHTSSREGSPVSTKAKETQDVTEIASEDTQEVQEEKVTESTPPSRPT
SLPSELQKPQESFGKTGNQTAAASEEEKPNAVAHQNPPAGKAKQEQEMSKPSSEDLSNLV
QSGVDIQSYQPANDPCSRELLQRSEMSSSSAPPGSSGYHQQWETKAELANSVRSSLATSS
PKLRWEFFAPQEEAEKDHRGNVSVPVLPQAKRGDRWSWDPDEERKRQERWQQEQERMLQE
KYQREQEKLKEEWEKAQKEVAEEERKYHEEERRILEETVTPLTPRSSALPSPSRDELSSL
PTDPQDTIVRSLADWERKQELLERQSRESTESVDLKRRENDRTSDISTADDSMKTARSSM
SQSSSQVEKFGHSLQNGQKVPPVLAKSSTPVKKQQELPADGSKPPGGRRSGPIDNNMGRS
SSKTPAACPPPSDALPPAPNRSVSGKKLCSSCGQPLGKGAAMIIETLSLYFHIHCFKCGV
CKGQLGDTTTGTDVRIKNGLLNCHQCYIRSRSAGQPTTL
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtccggttgcagacataggacagtctcatcagcatcaccccgtgaacgagtcg
gccgcacagtccgcgtttctggaggcgcagaaatggatagaggctgtgacaggaagatgt
tttggtgagaaggatttccgaggaggtttagagaatggaatactactgtgcgagttgctg
agctcaattagacctggactggtgaagaaaatcaatagacttccaacaccgattgctggc
ctagacaacctcagtgtgtttttgcgtggctgtgaggagttaggactgaagggctcccag
ctctttgaccctggagacctgcaggacacatcaacacgccccacggccaagggaagtgac
ggcagtcgaaagctcaagaatgttttaattactatctactggttgggtcgtgctgccaat
agctgtacatcctacaacgggcccacgttggacctgaaagagtttgagggcctgctgtca
cagatgcgaaaggagacagaagaggcagagagccctaaacgcagcatccgggacagtggc
tacattgactgctgggactctgagcgcagcgactctctctctccgccacgccacgggcgc
gaggattcattcgacagcctggactccttcggatcacgctcaagacaaaccccgtcacca
gacgtcctggtcgcccgcggcagcagtgatggccgtggcagcgactcggagtctgacggc
gctcctcaccggaagatgccagatgttcgtaaggatgacatgttggcacgacggacgtct
gtcagcgagccacgaaccgccgtaccctttaaccagtacctgcccaacaagagcaaccag
agtggatatctgccaacgccactacgcaaaaagagcaacgacaaagaggagggaggacgc
aagagctggagtaccgccacttcacctgtagggggtgacagacctcttagtctaaatgag
gtctgtagcttagaaatccctcctggagaatcccctagtccatcccccaccctgcccctt
aaaccctgtacacagattcaaaaggagaaccacattaaaaaggacaagcacgaagggagg
cagtctgcatctccgccttgcattgagatccatacagcaggcaaaagaaggagaagtgag
cctctgcccagtagtctcccccagccccaagcagagcccccaagagagactgtaattcat
ctgatggtcacctctgagcaaagtactccagctcgctcgtgctcagaggaattcttccac
cattcgtcgaccctagcagcaaatgccacggccgcctccgtgtttcaaacgagccccatc
aacacagctgggaagcattcacctgtgacacaccaggaggatgtcgcaataaggaaagga
gttcctggttctctggtagctgcagatgcaaaaggagatgataaacaggcttgtcaaata
ccgacctcacccaaatgtatcgtcaccctgagtccgtctagcttccttcctgtgcccact
gccatggcaaccgcatcaacagaaacgactgatacgtgccggcagaagggaaagccacag
actgaaatggatgaaggcacgtcttgggtggacagcagtcttccagcaaagagtgtgagt
atgatcgacatgcgtggtgaggaagaagccacgttacagccgcacagtcaggtgcgtcat
gagcggatgcataaccagtacaacaaaatgaaggaagaggaggaccactggcaggatgac
ctggcccgatggaaaagtcggaggaggagtatttcccaggatctgatcaaaaaggaggag
gaaaggaagatgatggagcgcctgatgtcaggagacacttatacctctcagaggagaaga
agcatcaagacctatagggagatagtagaggacaaggagcgtcgtgaggaggatctacgg
caggcatacaagaaagccaaaactcctgaggaggcgactgccattctccaacgttacgcc
cagcgtttctccataagcgaaacagtcctcgaacgcctgcagctgccaaagttgttggac
cgcagcatatccgctgacccctccttccccacctcacctttcccgctctccctctccctg
tcagcctctcccacgacaccagaccctttcgattctgacttcaatgggcccatgaggtat
ctgcgccagcagtctgccccgactccaaagtttacttctacatttgaggcgcgaatcgag
gagtttcccaaagaaccgtcctcacaccagcggtctcagatacgctctcgctcctctgaa
ccgccatcaacccgagccctgtcacccaaaccggtgcctttgctgatgcccaagccttat
ttccaggcccgacctgcaggaggtgaaacttggaacaacaaggtggatggtttgctgcga
gtaaatggtgacgttggaagtgacgatgttcccaccacacctgagagtcaagggagggac
tcgcctccccattttcaggcatccccttcccaaagcaaaaacagcactgtagatggtgct
gtagatgttcccttgtcagaaacctcactccctcacagtacccacacctcttctagggaa
ggaagtccagtgtcaacaaaggcaaaggagacacaagatgttacagagatagcttctgag
gacactcaggaggtccaggaggagaaagtcactgagtcaacaccacccagccggcccacc
tcactcccatcagagctgcagaagccacaggaaagctttggaaagactggaaaccagaca
gcagctgcttcagaggaagaaaagccaaatgctgtagctcatcaaaacccacctgcaggt
aaagccaaacaagaacaagaaatgtccaaaccatctagtgaagacctctctaatcttgtc
cagtctggggttgatatacagtcatatcagccagccaatgatccctgctcccgggagctc
ttacagaggtcagagatgtcatcaagctcagctccaccaggatcatctggttatcaccag
caatgggaaacaaaagcagagcttgcaaacagtgtcaggtcttcgttggcaaccagcagc
cctaaattacgctgggagttcttcgctccgcaagaagaggcggaaaaggatcaccgtgga
aatgtgtcagttccggtgttaccccaggccaagcggggagaccgctggtcttgggacccg
gatgaggagcgaaagcgtcaggaaaggtggcagcaagagcaggagcgcatgctgcaggag
aagtaccagcgtgagcaggagaaactgaaggaggagtgggagaaagcacagaaggaggtg
gcagaggaggaaaggaagtaccacgaggaggagcgtcggatactggaggaaaccgtgacg
cctctgacgccccgctcttccgccctgccctcccccagtcgagatgaactctcctctctc
ccaactgatcctcaggacactatcgttcgttctcttgctgactgggaacgtaaacaggaa
ctgctggagaggcaatcgagggagagcacagagagcgtggatctgaaacggagagaaaat
gaccggactagtgacatcagcaccgctgatgacagcatgaaaacagccagaagctcaatg
agtcagagcagcagtcaggtggagaaatttggacacagcctacagaatggccaaaaggtt
cctccggtactggccaagtcttcaactccagtcaagaaacaacaagaactcccagcagac
ggcagcaaacctccaggaggacgaaggagtggccctattgataataacatgggccgcagc
tcatcaaaaacccctgcagcatgcccaccaccctctgacgcactgcctccagcacccaac
aggtctgtcagtgggaagaagctgtgttccagctgtggtcagccattagggaaaggggct
gccatgatcatagagaccctcagcctctatttccacatccactgctttaagtgtggcgtg
tgtaaaggacagttaggcgatacaaccacagggacggatgttcgaataaaaaacggcctc
ctcaactgccaccagtgctacatccgctcccgctctgccggacagccaaccacattgtga
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